RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 SPRR1BP22528 89 aa8.92□□□□□ -0.98
USE1-208ENST00000600970 MIEN1Q9BRT3 115 aa8.92□□□□□ -0.98
USE1-208ENST00000600970 LEPROTO15243 131 aa8.9□□□□□ -0.98
USE1-208ENST00000600970 RPL37P61927 97 aaKnown RBP8.9□□□□□ -0.98
USE1-208ENST00000600970 RHEBQ15382 184 aa8.89□□□□□ -0.99
USE1-208ENST00000600970 SLC25A34Q6PIV7 304 aa8.89□□□□□ -0.99
USE1-208ENST00000600970 CHCHD1Q96BP2 118 aaKnown RBP8.88□□□□□ -0.99
USE1-208ENST00000600970 LAMTOR3Q9UHA4 124 aa8.88□□□□□ -0.99
USE1-208ENST00000600970 HINT1P49773 126 aaPredicted RBP8.87□□□□□ -0.99
USE1-208ENST00000600970 IFITM2Q01629 132 aa8.87□□□□□ -0.99
USE1-208ENST00000600970 CD164Q04900 197 aa8.87□□□□□ -0.99
USE1-208ENST00000600970 SOSTDC1Q6X4U4 206 aa8.87□□□□□ -0.99
USE1-208ENST00000600970 COMMD7Q86VX2 200 aa8.87□□□□□ -0.99
USE1-208ENST00000600970 EIF4EBP3O60516 100 aaPredicted RBP8.86□□□□□ -0.99
USE1-208ENST00000600970 C10orf91Q5T1B1 145 aa8.86□□□□□ -0.99
USE1-208ENST00000600970 H0Y8G0 127 aa8.85□□□□□ -0.99
USE1-208ENST00000600970 H7C2G1 150 aa8.85□□□□□ -0.99
USE1-208ENST00000600970 J3QQQ9 107 aa8.85□□□□□ -0.99
USE1-208ENST00000600970 NPC2P61916 151 aa8.85□□□□□ -0.99
USE1-208ENST00000600970 C1orf195Q5TG92 126 aa8.84□□□□□ -0.99
USE1-208ENST00000600970 Q5XG85 94 aa8.83□□□□□ -1
USE1-208ENST00000600970 DHRS4-AS1Q9P1J3 65 aa8.83□□□□□ -1
USE1-208ENST00000600970 CBY1Q9Y3M2 126 aa8.83□□□□□ -1
USE1-208ENST00000600970 NMUP48645 174 aa8.82□□□□□ -1
USE1-208ENST00000600970 Q1RN00 199 aa8.82□□□□□ -1
USE1-208ENST00000600970 PRO1933Q9H354 126 aa8.82□□□□□ -1
USE1-208ENST00000600970 ADAMTSL4-AS1Q5T5F5 129 aa8.81□□□□□ -1
USE1-208ENST00000600970 LGALS3P17931 250 aaKnown RBP8.8□□□□□ -1
USE1-208ENST00000600970 SSPOA2VEC9 5147 aa8.8□□□□□ -1
USE1-208ENST00000600970 USH2AO75445 5202 aa8.8□□□□□ -1
USE1-208ENST00000600970 HSBP1O75506 76 aa8.79□□□□□ -1
USE1-208ENST00000600970 PLNP26678 52 aa8.79□□□□□ -1
USE1-208ENST00000600970 HERVK_113P61574 105 aa8.78□□□□□ -1
USE1-208ENST00000600970 TAL2Q16559 108 aa8.78□□□□□ -1
USE1-208ENST00000600970 DEFB105AQ8NG35 78 aa8.78□□□□□ -1
USE1-208ENST00000600970 A0A0J9YXY3 114 aa8.77□□□□□ -1.01
USE1-208ENST00000600970 SMIM29Q86T20 159 aa8.77□□□□□ -1.01
USE1-208ENST00000600970 OR13C6PQ8NH95 151 aa8.77□□□□□ -1.01
USE1-208ENST00000600970 AKR1D1P51857 326 aa8.76□□□□□ -1.01
USE1-208ENST00000600970 A0A0G2JQZ4 141 aa8.75□□□□□ -1.01
USE1-208ENST00000600970 TEX49A0A1B0GTD5 131 aa8.75□□□□□ -1.01
USE1-208ENST00000600970 DPM2O94777 84 aa8.75□□□□□ -1.01
USE1-208ENST00000600970 LEPROTL1O95214 131 aa8.75□□□□□ -1.01
USE1-208ENST00000600970 ELOF1P60002 83 aaKnown RBP8.75□□□□□ -1.01
USE1-208ENST00000600970 Q6Q795 121 aa8.75□□□□□ -1.01
USE1-208ENST00000600970 PMCHL2Q9BQD1 86 aa8.74□□□□□ -1.01
USE1-208ENST00000600970 SPANXCQ9NY87 97 aa8.74□□□□□ -1.01
USE1-208ENST00000600970 CFC1P0CG37 223 aa8.73□□□□□ -1.01
USE1-208ENST00000600970 COX7BP24311 80 aa8.73□□□□□ -1.01
USE1-208ENST00000600970 IGKCP01834 107 aa8.72□□□□□ -1.01
USE1-208ENST00000600970 C6orf99Q4VX62 202 aa8.72□□□□□ -1.01
USE1-208ENST00000600970 LINC00308Q8TCZ7 52 aa8.72□□□□□ -1.01
USE1-208ENST00000600970 KRTAP9-8Q9BYQ0 159 aa8.72□□□□□ -1.01
USE1-208ENST00000600970 YPEL4Q96NS1 127 aa8.7□□□□□ -1.02
USE1-208ENST00000600970 LITAFQ99732 161 aa8.7□□□□□ -1.02
USE1-208ENST00000600970 SPANXDQ9BXN6 97 aa8.7□□□□□ -1.02
USE1-208ENST00000600970 LINC00310P59036 64 aa8.68□□□□□ -1.02
USE1-208ENST00000600970 E9PLD3 99 aa8.67□□□□□ -1.02
USE1-208ENST00000600970 APOC3P02656 99 aa8.67□□□□□ -1.02
USE1-208ENST00000600970 FCGBPQ9Y6R7 5405 aaPredicted RBP8.66□□□□□ -1.02
USE1-208ENST00000600970 IGLV5-48A0A075B6I7 105 aa8.66□□□□□ -1.02
USE1-208ENST00000600970 SERF1AO75920 110 aa8.66□□□□□ -1.02
USE1-208ENST00000600970 SNAPINO95295 136 aa8.66□□□□□ -1.02
USE1-208ENST00000600970 TCL1BO95988 128 aa8.66□□□□□ -1.02
USE1-208ENST00000600970 FABP4P15090 132 aa8.66□□□□□ -1.02
USE1-208ENST00000600970 HSPB8Q9UJY1 196 aa8.66□□□□□ -1.02
USE1-208ENST00000600970 TIMM17BO60830 172 aa8.64□□□□□ -1.03
USE1-208ENST00000600970 ATP11AUNQ6ZP68 121 aa8.64□□□□□ -1.03
USE1-208ENST00000600970 TRBV7-6A0A0J9YX20 115 aa8.63□□□□□ -1.03
USE1-208ENST00000600970 SVBPQ8N300 66 aa8.63□□□□□ -1.03
USE1-208ENST00000600970 Q75L30 129 aa8.62□□□□□ -1.03
USE1-208ENST00000600970 LINC00518Q8N0U6 118 aa8.62□□□□□ -1.03
USE1-208ENST00000600970 A0A1B0GWB2 263 aa8.61□□□□□ -1.03
USE1-208ENST00000600970 PCP2Q8IVA1 136 aa8.61□□□□□ -1.03
USE1-208ENST00000600970 TRGC2P03986 189 aa8.59□□□□□ -1.03
USE1-208ENST00000600970 NDUFA5Q16718 116 aa8.59□□□□□ -1.03
USE1-208ENST00000600970 C20orf202A1L168 122 aa8.58□□□□□ -1.04
USE1-208ENST00000600970 KRTAP19-1Q8IUB9 90 aa8.58□□□□□ -1.04
USE1-208ENST00000600970 OBSCN-AS1Q96MR7 158 aa8.58□□□□□ -1.04
USE1-208ENST00000600970 ZNF815PA8K554 130 aa8.55□□□□□ -1.04
USE1-208ENST00000600970 TTTY13Q9BZ97 58 aa8.54□□□□□ -1.04
USE1-208ENST00000600970 LCE2BO14633 110 aa8.53□□□□□ -1.04
USE1-208ENST00000600970 MT2AP02795 61 aa8.53□□□□□ -1.04
USE1-208ENST00000600970 A4D1N5 150 aa8.52□□□□□ -1.05
USE1-208ENST00000600970 TRBV7-7A0A0K0K1E9 115 aa8.51□□□□□ -1.05
USE1-208ENST00000600970 A6NDN8 102 aa8.51□□□□□ -1.05
USE1-208ENST00000600970 F8WEM9 126 aa8.51□□□□□ -1.05
USE1-208ENST00000600970 NHP2Q9NX24 153 aaKnown RBP8.51□□□□□ -1.05
USE1-208ENST00000600970 MACF1Q9UPN3 7388 aaKnown RBP8.49□□□□□ -1.05
USE1-208ENST00000600970 SYS1-DBNDD2H3BUS1 97 aa8.49□□□□□ -1.05
USE1-208ENST00000600970 Q96NJ1 140 aa8.49□□□□□ -1.05
USE1-208ENST00000600970 TRBV20-1A0A075B6N2 111 aa8.48□□□□□ -1.05
USE1-208ENST00000600970 MT1FP04733 61 aa8.47□□□□□ -1.05
USE1-208ENST00000600970 IGFL1Q6UW32 110 aa8.47□□□□□ -1.05
USE1-208ENST00000600970 CLEC2BQ92478 149 aa8.47□□□□□ -1.05
USE1-208ENST00000600970 LINC01545Q5VT33 79 aa8.46□□□□□ -1.06
USE1-208ENST00000600970 Q6JHZ5 121 aa8.46□□□□□ -1.06
USE1-208ENST00000600970 SMIM11BQ8TCY0 68 aa8.46□□□□□ -1.06
USE1-208ENST00000600970 C20orf166-AS1Q96NR2 134 aa8.45□□□□□ -1.06
USE1-208ENST00000600970 KRTAP9-3Q9BYQ3 159 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms