RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 BATFQ16520 125 aa5.18□□□□□ -1.58
SSBP4-208ENST00000600628 FAM229BQ4G0N7 80 aa5.18□□□□□ -1.58
SSBP4-208ENST00000600628 KRTAP13-2Q52LG2 175 aa5.18□□□□□ -1.58
SSBP4-208ENST00000600628 LINC00337Q8N6G1 96 aa5.18□□□□□ -1.58
SSBP4-208ENST00000600628 DAND5Q8N907 189 aa5.18□□□□□ -1.58
SSBP4-208ENST00000600628 IGLV6-57P01721 117 aa5.17□□□□□ -1.58
SSBP4-208ENST00000600628 COX8AP10176 69 aa5.17□□□□□ -1.58
SSBP4-208ENST00000600628 LGALS3P17931 250 aaKnown RBP5.17□□□□□ -1.58
SSBP4-208ENST00000600628 UBE2AP49459 152 aa5.17□□□□□ -1.58
SSBP4-208ENST00000600628 TRBV10-3A0A0K0K1G6 114 aa5.16□□□□□ -1.58
SSBP4-208ENST00000600628 DLEU1O43261 78 aa5.16□□□□□ -1.58
SSBP4-208ENST00000600628 PRLHP81277 87 aa5.16□□□□□ -1.58
SSBP4-208ENST00000600628 PPDPFQ9H3Y8 114 aa5.16□□□□□ -1.58
SSBP4-208ENST00000600628 SPANXB1Q9NS25 103 aaPredicted RBP5.16□□□□□ -1.58
SSBP4-208ENST00000600628 NCR3O14931 201 aa5.15□□□□□ -1.59
SSBP4-208ENST00000600628 ANKRD39Q53RE8 183 aa5.15□□□□□ -1.59
SSBP4-208ENST00000600628 FAM19A1Q7Z5A9 133 aa5.15□□□□□ -1.59
SSBP4-208ENST00000600628 TTTY13Q9BZ97 58 aa5.15□□□□□ -1.59
SSBP4-208ENST00000600628 RNF213Q63HN8 5207 aa5.15□□□□□ -1.59
SSBP4-208ENST00000600628 CRYGAP11844 174 aa5.14□□□□□ -1.59
SSBP4-208ENST00000600628 HINT1P49773 126 aaPredicted RBP5.14□□□□□ -1.59
SSBP4-208ENST00000600628 SMCR5Q8TEV8 140 aa5.14□□□□□ -1.59
SSBP4-208ENST00000600628 ANAPC11Q9NYG5 84 aa5.14□□□□□ -1.59
SSBP4-208ENST00000600628 A6NDN8 102 aa5.13□□□□□ -1.59
SSBP4-208ENST00000600628 B5MCH6 92 aa5.13□□□□□ -1.59
SSBP4-208ENST00000600628 LINC00308Q8TCZ7 52 aa5.13□□□□□ -1.59
SSBP4-208ENST00000600628 SPRR4Q96PI1 79 aa5.13□□□□□ -1.59
SSBP4-208ENST00000600628 ZNF815PA8K554 130 aa5.12□□□□□ -1.59
SSBP4-208ENST00000600628 HSD52Q0P140 79 aa5.12□□□□□ -1.59
SSBP4-208ENST00000600628 LINC00483Q53H64 154 aa5.12□□□□□ -1.59
SSBP4-208ENST00000600628 Q6ZRX8 168 aa5.12□□□□□ -1.59
SSBP4-208ENST00000600628 TYMSOSQ8TAI1 123 aa5.12□□□□□ -1.59
SSBP4-208ENST00000600628 Q9BRP9 147 aa5.12□□□□□ -1.59
SSBP4-208ENST00000600628 SPANXDQ9BXN6 97 aa5.12□□□□□ -1.59
SSBP4-208ENST00000600628 SPANXCQ9NY87 97 aa5.12□□□□□ -1.59
SSBP4-208ENST00000600628 HIGD1BQ9P298 99 aa5.12□□□□□ -1.59
SSBP4-208ENST00000600628 BVES-AS1Q5T3Y7 98 aa5.11□□□□□ -1.59
SSBP4-208ENST00000600628 PCP2Q8IVA1 136 aa5.11□□□□□ -1.59
SSBP4-208ENST00000600628 ERC2-IT1O76042 136 aa5.1□□□□□ -1.59
SSBP4-208ENST00000600628 HIGD2AQ9BW72 106 aa5.1□□□□□ -1.59
SSBP4-208ENST00000600628 ETDCA0A1B0GVM5 59 aa5.09□□□□□ -1.59
SSBP4-208ENST00000600628 TSPAN13O95857 204 aa5.09□□□□□ -1.59
SSBP4-208ENST00000600628 UBE2V1Q13404 147 aa5.09□□□□□ -1.59
SSBP4-208ENST00000600628 TAL2Q16559 108 aa5.09□□□□□ -1.59
SSBP4-208ENST00000600628 C2orf91Q6ZV80 131 aa5.09□□□□□ -1.59
SSBP4-208ENST00000600628 Q6ZVH6 145 aa5.09□□□□□ -1.59
SSBP4-208ENST00000600628 C3orf22Q8N5N4 141 aa5.09□□□□□ -1.59
SSBP4-208ENST00000600628 TRAV23DV6A0A075B6W5 121 aa5.08□□□□□ -1.6
SSBP4-208ENST00000600628 ZNF73O43830 326 aaPredicted RBP5.08□□□□□ -1.6
SSBP4-208ENST00000600628 IFITM1P13164 125 aa5.08□□□□□ -1.6
SSBP4-208ENST00000600628 NPC2P61916 151 aa5.08□□□□□ -1.6
SSBP4-208ENST00000600628 MUC2Q02817 5179 aa5.08□□□□□ -1.6
SSBP4-208ENST00000600628 VAMP3Q15836 100 aa5.07□□□□□ -1.6
SSBP4-208ENST00000600628 PRR4Q16378 134 aa5.07□□□□□ -1.6
SSBP4-208ENST00000600628 S100A7L2Q5SY68 101 aa5.07□□□□□ -1.6
SSBP4-208ENST00000600628 ZNF706Q9Y5V0 76 aaPredicted RBP5.07□□□□□ -1.6
SSBP4-208ENST00000600628 TAX1BP3O14907 124 aa5.06□□□□□ -1.6
SSBP4-208ENST00000600628 GTF2H5Q6ZYL4 71 aa5.06□□□□□ -1.6
SSBP4-208ENST00000600628 LINC00304Q8N9R0 145 aa5.06□□□□□ -1.6
SSBP4-208ENST00000600628 MUC17Q685J3 4493 aa5.06□□□□□ -1.6
SSBP4-208ENST00000600628 TRBV7-6A0A0J9YX20 115 aa5.05□□□□□ -1.6
SSBP4-208ENST00000600628 SPRR1BP22528 89 aa5.05□□□□□ -1.6
SSBP4-208ENST00000600628 CBY1Q9Y3M2 126 aa5.05□□□□□ -1.6
SSBP4-208ENST00000600628 C9orf118A6NHY6 69 aa5.04□□□□□ -1.6
SSBP4-208ENST00000600628 ELOF1P60002 83 aaKnown RBP5.04□□□□□ -1.6
SSBP4-208ENST00000600628 SCGB1D4Q6XE38 83 aa5.04□□□□□ -1.6
SSBP4-208ENST00000600628 MUSTN1Q8IVN3 82 aa5.04□□□□□ -1.6
SSBP4-208ENST00000600628 TMEM238LA0A1B0GVL6 79 aa5.03□□□□□ -1.6
SSBP4-208ENST00000600628 A6NJY4 79 aa5.03□□□□□ -1.6
SSBP4-208ENST00000600628 SPAG11AQ6PDA7 123 aa5.03□□□□□ -1.6
SSBP4-208ENST00000600628 COPS9Q8WXC6 57 aa5.03□□□□□ -1.6
SSBP4-208ENST00000600628 FABP2P12104 132 aa5.02□□□□□ -1.61
SSBP4-208ENST00000600628 RPS29P62273 56 aaKnown RBP5.02□□□□□ -1.61
SSBP4-208ENST00000600628 SSBP3-AS1Q7Z2R9 100 aa5.02□□□□□ -1.61
SSBP4-208ENST00000600628 CEND1Q8N111 149 aa5.02□□□□□ -1.61
SSBP4-208ENST00000600628 HIST1H4GQ99525 98 aa5.02□□□□□ -1.61
SSBP4-208ENST00000600628 DHRS4-AS1Q9P1J3 65 aa5.02□□□□□ -1.61
SSBP4-208ENST00000600628 C6orf99Q4VX62 202 aa5.01□□□□□ -1.61
SSBP4-208ENST00000600628 GAGE2AQ6NT46 116 aa5.01□□□□□ -1.61
SSBP4-208ENST00000600628 OR13C6PQ8NH95 151 aa5.01□□□□□ -1.61
SSBP4-208ENST00000600628 K7EP34 96 aa5□□□□□ -1.61
SSBP4-208ENST00000600628 LINC01547P58512 204 aaPredicted RBP5□□□□□ -1.61
SSBP4-208ENST00000600628 ST20-AS1Q8NBB2 130 aa5□□□□□ -1.61
SSBP4-208ENST00000600628 Q8NBF4 154 aa5□□□□□ -1.61
SSBP4-208ENST00000600628 RETNLBQ9BQ08 111 aa5□□□□□ -1.61
SSBP4-208ENST00000600628 IGLV5-48A0A075B6I7 105 aa4.99□□□□□ -1.61
SSBP4-208ENST00000600628 TRAV13-2A0A0B4J235 113 aa4.99□□□□□ -1.61
SSBP4-208ENST00000600628 A0A1B0GWB2 263 aa4.99□□□□□ -1.61
SSBP4-208ENST00000600628 A0A1W2PPM0 123 aa4.99□□□□□ -1.61
SSBP4-208ENST00000600628 H3BUT2 72 aa4.99□□□□□ -1.61
SSBP4-208ENST00000600628 SPINK1P00995 79 aa4.99□□□□□ -1.61
SSBP4-208ENST00000600628 TPRXLQ17RH7 258 aa4.99□□□□□ -1.61
SSBP4-208ENST00000600628 C4orf48Q5BLP8 95 aa4.99□□□□□ -1.61
SSBP4-208ENST00000600628 LYRM7Q5U5X0 104 aa4.99□□□□□ -1.61
SSBP4-208ENST00000600628 NHP2Q9NX24 153 aaKnown RBP4.99□□□□□ -1.61
SSBP4-208ENST00000600628 A4D1N5 150 aa4.98□□□□□ -1.61
SSBP4-208ENST00000600628 K7ERU9 68 aa4.98□□□□□ -1.61
SSBP4-208ENST00000600628 COX7BP24311 80 aa4.98□□□□□ -1.61
SSBP4-208ENST00000600628 FXYD2P54710 66 aa4.98□□□□□ -1.61
SSBP4-208ENST00000600628 SMIM11BQ8TCY0 68 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms