RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 TMEM126AQ9H061 195 aa11.51□□□□□ -0.57
CCDC9-205ENST00000600117 A4D1N5 150 aa11.5□□□□□ -0.57
CCDC9-205ENST00000600117 PRYO14603 147 aa11.5□□□□□ -0.57
CCDC9-205ENST00000600117 S100A7L2Q5SY68 101 aa11.5□□□□□ -0.57
CCDC9-205ENST00000600117 PRO1933Q9H354 126 aa11.5□□□□□ -0.57
CCDC9-205ENST00000600117 SPRR1AP35321 89 aa11.48□□□□□ -0.57
CCDC9-205ENST00000600117 TAL2Q16559 108 aa11.48□□□□□ -0.57
CCDC9-205ENST00000600117 C12orf57Q99622 126 aa11.48□□□□□ -0.57
CCDC9-205ENST00000600117 KRTAP13-1Q8IUC0 172 aa11.47□□□□□ -0.57
CCDC9-205ENST00000600117 KRTAP4-16G5E9R7 235 aaPredicted RBP11.46□□□□□ -0.57
CCDC9-205ENST00000600117 OR13C6PQ8NH95 151 aa11.46□□□□□ -0.57
CCDC9-205ENST00000600117 TRAV23DV6A0A075B6W5 121 aa11.45□□□□□ -0.58
CCDC9-205ENST00000600117 SPINK6Q6UWN8 80 aa11.45□□□□□ -0.58
CCDC9-205ENST00000600117 ZNF861PO60384 105 aa11.44□□□□□ -0.58
CCDC9-205ENST00000600117 CEND1Q8N111 149 aa11.44□□□□□ -0.58
CCDC9-205ENST00000600117 HSD52Q0P140 79 aa11.43□□□□□ -0.58
CCDC9-205ENST00000600117 FAM19A1Q7Z5A9 133 aa11.43□□□□□ -0.58
CCDC9-205ENST00000600117 TRAV13-2A0A0B4J235 113 aa11.42□□□□□ -0.58
CCDC9-205ENST00000600117 UBE2AP49459 152 aa11.42□□□□□ -0.58
CCDC9-205ENST00000600117 PRLHP81277 87 aa11.42□□□□□ -0.58
CCDC9-205ENST00000600117 A6NDN8 102 aa11.41□□□□□ -0.58
CCDC9-205ENST00000600117 MT1HL1P0DM35 61 aa11.41□□□□□ -0.58
CCDC9-205ENST00000600117 RPL28P46779 137 aaKnown RBP11.41□□□□□ -0.58
CCDC9-205ENST00000600117 FXYD2P54710 66 aa11.41□□□□□ -0.58
CCDC9-205ENST00000600117 CBY1Q9Y3M2 126 aa11.41□□□□□ -0.58
CCDC9-205ENST00000600117 ZNF73O43830 326 aaPredicted RBP11.4□□□□□ -0.58
CCDC9-205ENST00000600117 ETDCA0A1B0GVM5 59 aa11.39□□□□□ -0.59
CCDC9-205ENST00000600117 H0Y9J4 135 aa11.39□□□□□ -0.59
CCDC9-205ENST00000600117 CFC1BP0CG36 223 aa11.39□□□□□ -0.59
CCDC9-205ENST00000600117 CFC1P0CG37 223 aa11.39□□□□□ -0.59
CCDC9-205ENST00000600117 DIRC1Q969H9 104 aa11.39□□□□□ -0.59
CCDC9-205ENST00000600117 B5MCH6 92 aa11.38□□□□□ -0.59
CCDC9-205ENST00000600117 A0A0B4J2C4 111 aa11.36□□□□□ -0.59
CCDC9-205ENST00000600117 TMEM238LA0A1B0GVL6 79 aa11.35□□□□□ -0.59
CCDC9-205ENST00000600117 A6NJY4 79 aa11.35□□□□□ -0.59
CCDC9-205ENST00000600117 TSTD3H0UI37 97 aa11.35□□□□□ -0.59
CCDC9-205ENST00000600117 RPL13AP40429 203 aaKnown RBP11.35□□□□□ -0.59
CCDC9-205ENST00000600117 SMIM11BQ8TCY0 68 aa11.35□□□□□ -0.59
CCDC9-205ENST00000600117 C6orf99Q4VX62 202 aa11.34□□□□□ -0.59
CCDC9-205ENST00000600117 Q6ZRX8 168 aa11.34□□□□□ -0.59
CCDC9-205ENST00000600117 CTAG1AP78358 180 aa11.32□□□□□ -0.6
CCDC9-205ENST00000600117 SMCR5Q8TEV8 140 aa11.32□□□□□ -0.6
CCDC9-205ENST00000600117 RAB37Q96AX2 223 aa11.32□□□□□ -0.6
CCDC9-205ENST00000600117 Q9BRP9 147 aa11.32□□□□□ -0.6
CCDC9-205ENST00000600117 HIGD2AQ9BW72 106 aa11.32□□□□□ -0.6
CCDC9-205ENST00000600117 BVES-AS1Q5T3Y7 98 aa11.31□□□□□ -0.6
CCDC9-205ENST00000600117 TRBV7-6A0A0J9YX20 115 aa11.3□□□□□ -0.6
CCDC9-205ENST00000600117 KRTAP1-4P0C5Y4 121 aa11.3□□□□□ -0.6
CCDC9-205ENST00000600117 COX7BP24311 80 aa11.3□□□□□ -0.6
CCDC9-205ENST00000600117 HINT1P49773 126 aaPredicted RBP11.3□□□□□ -0.6
CCDC9-205ENST00000600117 ELOF1P60002 83 aaKnown RBP11.3□□□□□ -0.6
CCDC9-205ENST00000600117 A0A1B0GWB2 263 aa11.29□□□□□ -0.6
CCDC9-205ENST00000600117 NHP2Q9NX24 153 aaKnown RBP11.29□□□□□ -0.6
CCDC9-205ENST00000600117 ERC2-IT1O76042 136 aa11.28□□□□□ -0.6
CCDC9-205ENST00000600117 PRO1854Q9UHT4 67 aa11.28□□□□□ -0.6
CCDC9-205ENST00000600117 K7ERJ3 54 aa11.27□□□□□ -0.61
CCDC9-205ENST00000600117 H7C2G1 150 aa11.26□□□□□ -0.61
CCDC9-205ENST00000600117 LINC01600Q96MT4 127 aa11.25□□□□□ -0.61
CCDC9-205ENST00000600117 M0R143 59 aa11.24□□□□□ -0.61
CCDC9-205ENST00000600117 SPRR4Q96PI1 79 aa11.23□□□□□ -0.61
CCDC9-205ENST00000600117 DHRS4-AS1Q9P1J3 65 aa11.23□□□□□ -0.61
CCDC9-205ENST00000600117 ANAPC11Q9NYG5 84 aa11.21□□□□□ -0.61
CCDC9-205ENST00000600117 ZNF706Q9Y5V0 76 aaPredicted RBP11.2□□□□□ -0.62
CCDC9-205ENST00000600117 VAMP3Q15836 100 aa11.19□□□□□ -0.62
CCDC9-205ENST00000600117 Q1RN00 199 aa11.19□□□□□ -0.62
CCDC9-205ENST00000600117 TSPAN13O95857 204 aa11.18□□□□□ -0.62
CCDC9-205ENST00000600117 KRTAP10-8P60410 259 aa11.18□□□□□ -0.62
CCDC9-205ENST00000600117 LINC00575Q6W349 94 aa11.18□□□□□ -0.62
CCDC9-205ENST00000600117 PRR26Q8N8Z3 221 aa11.18□□□□□ -0.62
CCDC9-205ENST00000600117 ST20-AS1Q8NBB2 130 aa11.18□□□□□ -0.62
CCDC9-205ENST00000600117 A0A087X002 238 aa11.17□□□□□ -0.62
CCDC9-205ENST00000600117 FAM229BQ4G0N7 80 aa11.17□□□□□ -0.62
CCDC9-205ENST00000600117 TRIAP1O43715 76 aa11.16□□□□□ -0.62
CCDC9-205ENST00000600117 LINC00483Q53H64 154 aa11.16□□□□□ -0.62
CCDC9-205ENST00000600117 GAGE2AQ6NT46 116 aa11.14□□□□□ -0.63
CCDC9-205ENST00000600117 CRYGAP11844 174 aa11.13□□□□□ -0.63
CCDC9-205ENST00000600117 H0YGX0 51 aa11.12□□□□□ -0.63
CCDC9-205ENST00000600117 KRTAP13-2Q52LG2 175 aa11.12□□□□□ -0.63
CCDC9-205ENST00000600117 hADV29S1A0JD25 119 aa11.11□□□□□ -0.63
CCDC9-205ENST00000600117 SLC25A20O43772 301 aa11.11□□□□□ -0.63
CCDC9-205ENST00000600117 SPRR1BP22528 89 aa11.11□□□□□ -0.63
CCDC9-205ENST00000600117 BATFQ16520 125 aa11.11□□□□□ -0.63
CCDC9-205ENST00000600117 FAM218AQ96MZ4 157 aa11.11□□□□□ -0.63
CCDC9-205ENST00000600117 LINC01547P58512 204 aaPredicted RBP11.1□□□□□ -0.63
CCDC9-205ENST00000600117 LPAP08519 4548 aa11.1□□□□□ -0.63
CCDC9-205ENST00000600117 PSMB2P49721 201 aa11.09□□□□□ -0.63
CCDC9-205ENST00000600117 IGLV5-48A0A075B6I7 105 aa11.08□□□□□ -0.64
CCDC9-205ENST00000600117 C3orf22Q8N5N4 141 aa11.08□□□□□ -0.64
CCDC9-205ENST00000600117 Q6ZQY7 126 aa11.06□□□□□ -0.64
CCDC9-205ENST00000600117 DEFB105AQ8NG35 78 aa11.06□□□□□ -0.64
CCDC9-205ENST00000600117 CLEC2BQ92478 149 aa11.06□□□□□ -0.64
CCDC9-205ENST00000600117 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.05□□□□□ -0.64
CCDC9-205ENST00000600117 TYMSOSQ8TAI1 123 aa11.05□□□□□ -0.64
CCDC9-205ENST00000600117 SNHG12Q9BXW3 62 aa11.05□□□□□ -0.64
CCDC9-205ENST00000600117 TEX49A0A1B0GTD5 131 aa11.04□□□□□ -0.64
CCDC9-205ENST00000600117 A0A1B0GX51 115 aa11.04□□□□□ -0.64
CCDC9-205ENST00000600117 COX6CP09669 75 aa11.04□□□□□ -0.64
CCDC9-205ENST00000600117 Q8N377 158 aa11.04□□□□□ -0.64
CCDC9-205ENST00000600117 MUC2Q02817 5179 aa11.03□□□□□ -0.64
CCDC9-205ENST00000600117 NAA38Q9BRA0 125 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms