RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-208	ENST00000596365	FLG	P20930	4061 aa	Predicted RBP	4.7	□□□□□ -1.66
LINC00649-208	ENST00000596365		H3BRM9	83 aa		4.69	□□□□□ -1.66
LINC00649-208	ENST00000596365	KIR2DL4	Q99706	377 aa		4.69	□□□□□ -1.66
LINC00649-208	ENST00000596365	HIGD1B	Q9P298	99 aa		4.69	□□□□□ -1.66
LINC00649-208	ENST00000596365	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.68	□□□□□ -1.66
LINC00649-208	ENST00000596365	ORMDL2	Q53FV1	153 aa		4.68	□□□□□ -1.66
LINC00649-208	ENST00000596365	PCP2	Q8IVA1	136 aa		4.68	□□□□□ -1.66
LINC00649-208	ENST00000596365	C20orf78	Q9BR46	151 aa		4.68	□□□□□ -1.66
LINC00649-208	ENST00000596365	USH2A	O75445	5202 aa		4.67	□□□□□ -1.66
LINC00649-208	ENST00000596365	TRAV12-1	A0A0B4J245	112 aa		4.67	□□□□□ -1.66
LINC00649-208	ENST00000596365	GAGE10	A6NGK3	116 aa		4.67	□□□□□ -1.66
LINC00649-208	ENST00000596365		K7EMI3	77 aa		4.67	□□□□□ -1.66
LINC00649-208	ENST00000596365	PPP1R17	O96001	155 aa		4.67	□□□□□ -1.66
LINC00649-208	ENST00000596365	PRSS2	P07478	247 aa		4.67	□□□□□ -1.66
LINC00649-208	ENST00000596365	PLN	P26678	52 aa		4.67	□□□□□ -1.66
LINC00649-208	ENST00000596365	CKS1B	P61024	79 aa		4.67	□□□□□ -1.66
LINC00649-208	ENST00000596365	SUMO2	P61956	95 aa	Known RBP	4.67	□□□□□ -1.66
LINC00649-208	ENST00000596365	MRPS36	P82909	103 aa	Known RBP	4.67	□□□□□ -1.66
LINC00649-208	ENST00000596365	GTF2H5	Q6ZYL4	71 aa		4.67	□□□□□ -1.66
LINC00649-208	ENST00000596365		Q8N9P0	234 aa	Predicted RBP	4.67	□□□□□ -1.66
LINC00649-208	ENST00000596365	FAM104A	Q969W3	186 aa		4.67	□□□□□ -1.66
LINC00649-208	ENST00000596365	TOMM6	Q96B49	74 aa		4.67	□□□□□ -1.66
LINC00649-208	ENST00000596365	MACF1	Q9UPN3	7388 aa	Known RBP	4.66	□□□□□ -1.66
LINC00649-208	ENST00000596365	IGLV8-61	A0A075B6I0	122 aa		4.66	□□□□□ -1.66
LINC00649-208	ENST00000596365		F8VRH5	84 aa		4.66	□□□□□ -1.66
LINC00649-208	ENST00000596365	SPINK1	P00995	79 aa		4.66	□□□□□ -1.66
LINC00649-208	ENST00000596365	RPL32	P62910	135 aa	Known RBP	4.66	□□□□□ -1.66
LINC00649-208	ENST00000596365	ZC2HC1B	Q5TFG8	222 aa		4.66	□□□□□ -1.66
LINC00649-208	ENST00000596365	SPANXA1	Q9NS26	97 aa		4.66	□□□□□ -1.66
LINC00649-208	ENST00000596365	SYNE2	Q8WXH0	6885 aa	Known RBP	4.65	□□□□□ -1.66
LINC00649-208	ENST00000596365		H3BUT2	72 aa		4.65	□□□□□ -1.67
LINC00649-208	ENST00000596365		K7EP34	96 aa		4.65	□□□□□ -1.67
LINC00649-208	ENST00000596365	RPL39	P62891	51 aa	Known RBP	4.65	□□□□□ -1.67
LINC00649-208	ENST00000596365	PRLH	P81277	87 aa		4.65	□□□□□ -1.67
LINC00649-208	ENST00000596365	TAL2	Q16559	108 aa		4.65	□□□□□ -1.67
LINC00649-208	ENST00000596365	C6orf226	Q5I0X4	101 aa		4.65	□□□□□ -1.67
LINC00649-208	ENST00000596365	LINC01561	Q8N1V8	128 aa		4.65	□□□□□ -1.67
LINC00649-208	ENST00000596365	PLEKHB2	Q96CS7	222 aa		4.65	□□□□□ -1.67
LINC00649-208	ENST00000596365	SCGB3A1	Q96QR1	104 aa		4.65	□□□□□ -1.67
LINC00649-208	ENST00000596365	CST9L	Q9H4G1	147 aa		4.65	□□□□□ -1.67
LINC00649-208	ENST00000596365	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.65	□□□□□ -1.67
LINC00649-208	ENST00000596365		A0A1W2PPM0	123 aa		4.64	□□□□□ -1.67
LINC00649-208	ENST00000596365	LINC01549	A6NIU2	74 aa		4.64	□□□□□ -1.67
LINC00649-208	ENST00000596365	SMIM13	P0DJ93	91 aa		4.64	□□□□□ -1.67
LINC00649-208	ENST00000596365	FXYD2	P54710	66 aa		4.64	□□□□□ -1.67
LINC00649-208	ENST00000596365	PCOTH	Q58A44	107 aa		4.64	□□□□□ -1.67
LINC00649-208	ENST00000596365	C2orf66	Q6UXQ4	117 aa		4.64	□□□□□ -1.67
LINC00649-208	ENST00000596365	FAM19A1	Q7Z5A9	133 aa		4.64	□□□□□ -1.67
LINC00649-208	ENST00000596365	CEND1	Q8N111	149 aa		4.64	□□□□□ -1.67
LINC00649-208	ENST00000596365	NKAPP1	Q8N9T2	125 aa		4.64	□□□□□ -1.67
LINC00649-208	ENST00000596365		Q8NBF4	154 aa		4.64	□□□□□ -1.67
LINC00649-208	ENST00000596365	RAB37	Q96AX2	223 aa		4.64	□□□□□ -1.67
LINC00649-208	ENST00000596365	TTTY13	Q9BZ97	58 aa		4.64	□□□□□ -1.67
LINC00649-208	ENST00000596365	IGLV5-37	A0A075B6J1	123 aa		4.63	□□□□□ -1.67
LINC00649-208	ENST00000596365	FABP2	P12104	132 aa		4.63	□□□□□ -1.67
LINC00649-208	ENST00000596365	OCIAD2	Q56VL3	154 aa		4.63	□□□□□ -1.67
LINC00649-208	ENST00000596365	COX6B2	Q6YFQ2	88 aa		4.63	□□□□□ -1.67
LINC00649-208	ENST00000596365	NAA38	Q9BRA0	125 aa	Known RBP	4.63	□□□□□ -1.67
LINC00649-208	ENST00000596365	TOMM7	Q9P0U1	55 aa		4.63	□□□□□ -1.67
LINC00649-208	ENST00000596365	CYSLTR1	Q9Y271	337 aa		4.63	□□□□□ -1.67
LINC00649-208	ENST00000596365	SPCS1	Q9Y6A9	102 aa		4.63	□□□□□ -1.67
LINC00649-208	ENST00000596365	IGKV2-28	A0A075B6P5	120 aa		4.62	□□□□□ -1.67
LINC00649-208	ENST00000596365	MYMX	A0A1B0GTQ4	84 aa		4.62	□□□□□ -1.67
LINC00649-208	ENST00000596365		E9PLD3	99 aa		4.62	□□□□□ -1.67
LINC00649-208	ENST00000596365	IGKV2D-28	P01615	120 aa		4.62	□□□□□ -1.67
LINC00649-208	ENST00000596365		Q8IZM0	81 aa		4.62	□□□□□ -1.67
LINC00649-208	ENST00000596365	NHP2	Q9NX24	153 aa	Known RBP	4.62	□□□□□ -1.67
LINC00649-208	ENST00000596365		K7ERJ3	54 aa		4.61	□□□□□ -1.67
LINC00649-208	ENST00000596365		K7ERU9	68 aa		4.61	□□□□□ -1.67
LINC00649-208	ENST00000596365	SLC25A20	O43772	301 aa		4.61	□□□□□ -1.67
LINC00649-208	ENST00000596365	IGKV2-30	P06310	120 aa		4.61	□□□□□ -1.67
LINC00649-208	ENST00000596365	HERVK_113	P61574	105 aa		4.61	□□□□□ -1.67
LINC00649-208	ENST00000596365	RPS29	P62273	56 aa	Known RBP	4.61	□□□□□ -1.67
LINC00649-208	ENST00000596365	PAPPA-AS1	Q5QFB9	102 aa		4.61	□□□□□ -1.67
LINC00649-208	ENST00000596365		Q8N377	158 aa		4.61	□□□□□ -1.67
LINC00649-208	ENST00000596365	TMEM141	Q96I45	108 aa		4.61	□□□□□ -1.67
LINC00649-208	ENST00000596365	HIST1H4G	Q99525	98 aa		4.61	□□□□□ -1.67
LINC00649-208	ENST00000596365		A0A1B0GWB2	263 aa		4.6	□□□□□ -1.67
LINC00649-208	ENST00000596365	CFC1	P0CG37	223 aa		4.6	□□□□□ -1.67
LINC00649-208	ENST00000596365	PMVK	Q15126	192 aa		4.6	□□□□□ -1.67
LINC00649-208	ENST00000596365	LCE1A	Q5T7P2	110 aa		4.6	□□□□□ -1.67
LINC00649-208	ENST00000596365	SPRR4	Q96PI1	79 aa		4.6	□□□□□ -1.67
LINC00649-208	ENST00000596365	TIMM17A	Q99595	171 aa		4.6	□□□□□ -1.67
LINC00649-208	ENST00000596365	VPS25	Q9BRG1	176 aa		4.6	□□□□□ -1.67
LINC00649-208	ENST00000596365	TMEM126A	Q9H061	195 aa		4.6	□□□□□ -1.67
LINC00649-208	ENST00000596365	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.6	□□□□□ -1.67
LINC00649-208	ENST00000596365	IGIP	A6NJ69	53 aa		4.59	□□□□□ -1.67
LINC00649-208	ENST00000596365	C11orf86	A6NJI1	115 aa		4.59	□□□□□ -1.67
LINC00649-208	ENST00000596365	ZNF815P	A8K554	130 aa		4.59	□□□□□ -1.67
LINC00649-208	ENST00000596365	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.59	□□□□□ -1.67
LINC00649-208	ENST00000596365	PCP4	P48539	62 aa		4.59	□□□□□ -1.67
LINC00649-208	ENST00000596365	HIGD2A	Q9BW72	106 aa		4.59	□□□□□ -1.67
LINC00649-208	ENST00000596365	IGLV4-3	A0A075B6K6	122 aa		4.58	□□□□□ -1.68
LINC00649-208	ENST00000596365	TMEM238	C9JI98	176 aa		4.58	□□□□□ -1.68
LINC00649-208	ENST00000596365	CXCL5	P42830	114 aa		4.58	□□□□□ -1.68
LINC00649-208	ENST00000596365	PYGO1	Q9Y3Y4	419 aa		4.58	□□□□□ -1.68
LINC00649-208	ENST00000596365		M0R378	163 aa		4.57	□□□□□ -1.68
LINC00649-208	ENST00000596365	SCGB1D4	Q6XE38	83 aa		4.57	□□□□□ -1.68
LINC00649-208	ENST00000596365	GEMIN7	Q9H840	131 aa	Known RBP	4.57	□□□□□ -1.68
LINC00649-208	ENST00000596365	TMEM170B	Q5T4T1	132 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms