RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 C6orf99Q4VX62 202 aa9.2□□□□□ -0.94
SHKBP1-211ENST00000595945 CIRBP-AS1Q8TBR5 109 aa9.2□□□□□ -0.94
SHKBP1-211ENST00000595945 A0A1B0GV90 55 aa9.19□□□□□ -0.94
SHKBP1-211ENST00000595945 KRTAP4-16G5E9R7 235 aaPredicted RBP9.19□□□□□ -0.94
SHKBP1-211ENST00000595945 FABP2P12104 132 aa9.19□□□□□ -0.94
SHKBP1-211ENST00000595945 SCXQ7RTU7 201 aa9.19□□□□□ -0.94
SHKBP1-211ENST00000595945 TRBV7-6A0A0J9YX20 115 aa9.18□□□□□ -0.94
SHKBP1-211ENST00000595945 COX6CP09669 75 aa9.18□□□□□ -0.94
SHKBP1-211ENST00000595945 LYRM7Q5U5X0 104 aa9.18□□□□□ -0.94
SHKBP1-211ENST00000595945 DIRC1Q969H9 104 aa9.18□□□□□ -0.94
SHKBP1-211ENST00000595945 H0YGX0 51 aa9.17□□□□□ -0.94
SHKBP1-211ENST00000595945 SCGB1C2P0DMR2 95 aa9.17□□□□□ -0.94
SHKBP1-211ENST00000595945 UBE2BP63146 152 aa9.17□□□□□ -0.94
SHKBP1-211ENST00000595945 REG3GQ6UW15 175 aa9.17□□□□□ -0.94
SHKBP1-211ENST00000595945 APOBP04114 4563 aaKnown RBP9.17□□□□□ -0.94
SHKBP1-211ENST00000595945 TCL1BO95988 128 aa9.16□□□□□ -0.94
SHKBP1-211ENST00000595945 VAMP3Q15836 100 aa9.16□□□□□ -0.94
SHKBP1-211ENST00000595945 CLEC2BQ92478 149 aa9.16□□□□□ -0.94
SHKBP1-211ENST00000595945 K7EP34 96 aa9.15□□□□□ -0.94
SHKBP1-211ENST00000595945 ELOF1P60002 83 aaKnown RBP9.15□□□□□ -0.94
SHKBP1-211ENST00000595945 FAM218AQ96MZ4 157 aa9.15□□□□□ -0.94
SHKBP1-211ENST00000595945 SPCS1Q9Y6A9 102 aa9.15□□□□□ -0.94
SHKBP1-211ENST00000595945 TRBV20-1A0A075B6N2 111 aa9.14□□□□□ -0.95
SHKBP1-211ENST00000595945 B5MCH6 92 aa9.14□□□□□ -0.95
SHKBP1-211ENST00000595945 LST1O00453 97 aa9.14□□□□□ -0.95
SHKBP1-211ENST00000595945 COX7BP24311 80 aa9.14□□□□□ -0.95
SHKBP1-211ENST00000595945 LINC00528Q8N1L1 170 aa9.14□□□□□ -0.95
SHKBP1-211ENST00000595945 ETDCA0A1B0GVM5 59 aa9.12□□□□□ -0.95
SHKBP1-211ENST00000595945 XGP55808 180 aa9.12□□□□□ -0.95
SHKBP1-211ENST00000595945 HAMPP81172 84 aa9.12□□□□□ -0.95
SHKBP1-211ENST00000595945 LINC00575Q6W349 94 aa9.12□□□□□ -0.95
SHKBP1-211ENST00000595945 ATXN8Q156A1 80 aa9.11□□□□□ -0.95
SHKBP1-211ENST00000595945 Q6ZRX8 168 aa9.11□□□□□ -0.95
SHKBP1-211ENST00000595945 A0A1B0GX51 115 aa9.1□□□□□ -0.95
SHKBP1-211ENST00000595945 TRACP01848 142 aa9.1□□□□□ -0.95
SHKBP1-211ENST00000595945 PSORS1C2Q9UIG4 136 aa9.1□□□□□ -0.95
SHKBP1-211ENST00000595945 BCE1O60756 84 aa9.09□□□□□ -0.95
SHKBP1-211ENST00000595945 INAFM2P0DMQ5 153 aa9.09□□□□□ -0.95
SHKBP1-211ENST00000595945 GTF2H5Q6ZYL4 71 aa9.09□□□□□ -0.95
SHKBP1-211ENST00000595945 H0Y9J4 135 aa9.08□□□□□ -0.96
SHKBP1-211ENST00000595945 KRTAP13-1Q8IUC0 172 aa9.08□□□□□ -0.96
SHKBP1-211ENST00000595945 H3BMG7 143 aa9.07□□□□□ -0.96
SHKBP1-211ENST00000595945 UBE2V1Q13404 147 aa9.07□□□□□ -0.96
SHKBP1-211ENST00000595945 FAM19A1Q7Z5A9 133 aa9.07□□□□□ -0.96
SHKBP1-211ENST00000595945 Q9BRP9 147 aa9.07□□□□□ -0.96
SHKBP1-211ENST00000595945 hADV29S1A0JD25 119 aa9.06□□□□□ -0.96
SHKBP1-211ENST00000595945 DHRS4-AS1Q9P1J3 65 aa9.06□□□□□ -0.96
SHKBP1-211ENST00000595945 SRRM2Q9UQ35 2752 aaKnown RBP9.06□□□□□ -0.96
SHKBP1-211ENST00000595945 EPPK1P58107 5090 aaKnown RBP9.05□□□□□ -0.96
SHKBP1-211ENST00000595945 PRLHP81277 87 aa9.05□□□□□ -0.96
SHKBP1-211ENST00000595945 SMCR5Q8TEV8 140 aa9.05□□□□□ -0.96
SHKBP1-211ENST00000595945 RYR1P21817 5038 aa9.04□□□□□ -0.96
SHKBP1-211ENST00000595945 SLC25A20O43772 301 aa9.04□□□□□ -0.96
SHKBP1-211ENST00000595945 C1orf137Q5JT78 98 aa9.04□□□□□ -0.96
SHKBP1-211ENST00000595945 PRO0461Q9UI25 63 aa9.04□□□□□ -0.96
SHKBP1-211ENST00000595945 ERC2-IT1O76042 136 aa9.02□□□□□ -0.97
SHKBP1-211ENST00000595945 SNCGO76070 127 aa9.02□□□□□ -0.97
SHKBP1-211ENST00000595945 UBE2AP49459 152 aa9.02□□□□□ -0.97
SHKBP1-211ENST00000595945 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.02□□□□□ -0.97
SHKBP1-211ENST00000595945 C9JAW5 83 aa9.01□□□□□ -0.97
SHKBP1-211ENST00000595945 CDK2AP2O75956 126 aa9.01□□□□□ -0.97
SHKBP1-211ENST00000595945 LINC01600Q96MT4 127 aa9.01□□□□□ -0.97
SHKBP1-211ENST00000595945 DNAL4O96015 105 aa9□□□□□ -0.97
SHKBP1-211ENST00000595945 IGLV7-43P04211 117 aa9□□□□□ -0.97
SHKBP1-211ENST00000595945 SMCPP49901 116 aaPredicted RBP9□□□□□ -0.97
SHKBP1-211ENST00000595945 Q6ZQY7 126 aa9□□□□□ -0.97
SHKBP1-211ENST00000595945 FAT1Q14517 4588 aa9□□□□□ -0.97
SHKBP1-211ENST00000595945 HIGD2AQ9BW72 106 aa8.99□□□□□ -0.97
SHKBP1-211ENST00000595945 ZNF861PO60384 105 aa8.98□□□□□ -0.97
SHKBP1-211ENST00000595945 LINC01547P58512 204 aaPredicted RBP8.98□□□□□ -0.97
SHKBP1-211ENST00000595945 MTURNQ8N3F0 131 aa8.98□□□□□ -0.97
SHKBP1-211ENST00000595945 ORMDL1Q9P0S3 153 aa8.98□□□□□ -0.97
SHKBP1-211ENST00000595945 VPS13BQ7Z7G8 4022 aa8.97□□□□□ -0.97
SHKBP1-211ENST00000595945 F8W1H4 67 aa8.97□□□□□ -0.97
SHKBP1-211ENST00000595945 H3BT86 120 aa8.97□□□□□ -0.97
SHKBP1-211ENST00000595945 OCIAD2Q56VL3 154 aa8.97□□□□□ -0.97
SHKBP1-211ENST00000595945 KIAA1109Q2LD37 5005 aa8.97□□□□□ -0.97
SHKBP1-211ENST00000595945 IGLV5-48A0A075B6I7 105 aa8.96□□□□□ -0.98
SHKBP1-211ENST00000595945 SMR3BP02814 79 aaPredicted RBP8.96□□□□□ -0.98
SHKBP1-211ENST00000595945 BAALC-AS2P0C853 105 aa8.96□□□□□ -0.98
SHKBP1-211ENST00000595945 ST20-AS1Q8NBB2 130 aa8.96□□□□□ -0.98
SHKBP1-211ENST00000595945 HSPG2P98160 4391 aa8.95□□□□□ -0.98
SHKBP1-211ENST00000595945 H3BQ85 93 aa8.95□□□□□ -0.98
SHKBP1-211ENST00000595945 RPL37AP61513 92 aaKnown RBP8.95□□□□□ -0.98
SHKBP1-211ENST00000595945 ANKRD29Q8N6D5 301 aa8.95□□□□□ -0.98
SHKBP1-211ENST00000595945 KRTAP10-4P60372 401 aaPredicted RBP8.94□□□□□ -0.98
SHKBP1-211ENST00000595945 Q8N377 158 aa8.93□□□□□ -0.98
SHKBP1-211ENST00000595945 PPDPFLQ8WWR9 84 aa8.93□□□□□ -0.98
SHKBP1-211ENST00000595945 SPRR1BP22528 89 aa8.92□□□□□ -0.98
SHKBP1-211ENST00000595945 TMEM256-PLSCR3K7ERE1 68 aa8.91□□□□□ -0.98
SHKBP1-211ENST00000595945 GHRHP01286 108 aa8.91□□□□□ -0.98
SHKBP1-211ENST00000595945 SPRR4Q96PI1 79 aa8.9□□□□□ -0.98
SHKBP1-211ENST00000595945 BIRC6Q9NR09 4857 aa8.9□□□□□ -0.99
SHKBP1-211ENST00000595945 TEX49A0A1B0GTD5 131 aa8.89□□□□□ -0.99
SHKBP1-211ENST00000595945 DEFB105AQ8NG35 78 aa8.89□□□□□ -0.99
SHKBP1-211ENST00000595945 LINC00483Q53H64 154 aa8.88□□□□□ -0.99
SHKBP1-211ENST00000595945 SMIM29Q86T20 159 aa8.88□□□□□ -0.99
SHKBP1-211ENST00000595945 ZNF706Q9Y5V0 76 aaPredicted RBP8.88□□□□□ -0.99
SHKBP1-211ENST00000595945 PKHD1L1Q86WI1 4243 aa8.87□□□□□ -0.99
SHKBP1-211ENST00000595945 ETDBQ3ZM63 59 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms