RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 C9orf153Q5TBE3 101 aa10.75□□□□□ -0.69
PRKCSH-217ENST00000592741 NOTCH1P46531 2555 aa10.75□□□□□ -0.69
PRKCSH-217ENST00000592741 DNAH1Q9P2D7 4330 aa10.74□□□□□ -0.69
PRKCSH-217ENST00000592741 PRYO14603 147 aa10.73□□□□□ -0.69
PRKCSH-217ENST00000592741 Q6ZVQ6 151 aa10.73□□□□□ -0.69
PRKCSH-217ENST00000592741 LOC107984640A0A0U1RRK4 108 aa10.72□□□□□ -0.69
PRKCSH-217ENST00000592741 FAM168BA1KXE4 195 aa10.72□□□□□ -0.69
PRKCSH-217ENST00000592741 FAM19A1Q7Z5A9 133 aa10.71□□□□□ -0.69
PRKCSH-217ENST00000592741 RPL37AP8A6NKH3 93 aa10.7□□□□□ -0.7
PRKCSH-217ENST00000592741 COL6A5A8TX70 2615 aa10.7□□□□□ -0.7
PRKCSH-217ENST00000592741 IGLV1-50A0A075B6I6 118 aa10.7□□□□□ -0.7
PRKCSH-217ENST00000592741 LINC01547P58512 204 aaPredicted RBP10.7□□□□□ -0.7
PRKCSH-217ENST00000592741 DHRS4-AS1Q9P1J3 65 aa10.7□□□□□ -0.7
PRKCSH-217ENST00000592741 HAMPP81172 84 aa10.69□□□□□ -0.7
PRKCSH-217ENST00000592741 Q6ZRX8 168 aa10.69□□□□□ -0.7
PRKCSH-217ENST00000592741 SERP2Q8N6R1 65 aa10.69□□□□□ -0.7
PRKCSH-217ENST00000592741 ETDCA0A1B0GVM5 59 aa10.68□□□□□ -0.7
PRKCSH-217ENST00000592741 FAM19A5Q7Z5A7 132 aaPredicted RBP10.67□□□□□ -0.7
PRKCSH-217ENST00000592741 SPRR1AP35321 89 aa10.67□□□□□ -0.7
PRKCSH-217ENST00000592741 MRPL55Q7Z7F7 128 aaKnown RBP10.67□□□□□ -0.7
PRKCSH-217ENST00000592741 KRTAP4-16G5E9R7 235 aaPredicted RBP10.66□□□□□ -0.7
PRKCSH-217ENST00000592741 CXCL6P80162 114 aa10.66□□□□□ -0.7
PRKCSH-217ENST00000592741 KRTAP7-1Q8IUC3 87 aa10.66□□□□□ -0.7
PRKCSH-217ENST00000592741 DEFB105AQ8NG35 78 aa10.66□□□□□ -0.7
PRKCSH-217ENST00000592741 CRYGAP11844 174 aa10.66□□□□□ -0.7
PRKCSH-217ENST00000592741 UBE2DNLQ8IWF7 75 aa10.66□□□□□ -0.7
PRKCSH-217ENST00000592741 Q8N377 158 aa10.65□□□□□ -0.7
PRKCSH-217ENST00000592741 NBEAL1Q6ZS30 2694 aa10.65□□□□□ -0.71
PRKCSH-217ENST00000592741 Q9BRP9 147 aa10.64□□□□□ -0.71
PRKCSH-217ENST00000592741 KRTAP1-5Q9BYS1 174 aa10.64□□□□□ -0.71
PRKCSH-217ENST00000592741 PSCAO43653 123 aa10.62□□□□□ -0.71
PRKCSH-217ENST00000592741 APLNQ9ULZ1 77 aa10.62□□□□□ -0.71
PRKCSH-217ENST00000592741 IGLV5-48A0A075B6I7 105 aa10.6□□□□□ -0.71
PRKCSH-217ENST00000592741 CNBPP62633 177 aaKnown RBP10.6□□□□□ -0.71
PRKCSH-217ENST00000592741 REG3GQ6UW15 175 aa10.59□□□□□ -0.71
PRKCSH-217ENST00000592741 B9D2Q9BPU9 175 aa10.59□□□□□ -0.71
PRKCSH-217ENST00000592741 C16orf90A8MZG2 172 aa10.58□□□□□ -0.72
PRKCSH-217ENST00000592741 BCE1O60756 84 aa10.58□□□□□ -0.72
PRKCSH-217ENST00000592741 UBE2BP63146 152 aa10.58□□□□□ -0.72
PRKCSH-217ENST00000592741 SCXQ7RTU7 201 aa10.57□□□□□ -0.72
PRKCSH-217ENST00000592741 A0A096LNI7 61 aa10.57□□□□□ -0.72
PRKCSH-217ENST00000592741 C14orf177Q52M58 125 aa10.57□□□□□ -0.72
PRKCSH-217ENST00000592741 ST20-AS1Q8NBB2 130 aa10.57□□□□□ -0.72
PRKCSH-217ENST00000592741 DNAH9Q9NYC9 4486 aa10.56□□□□□ -0.72
PRKCSH-217ENST00000592741 IGKV2-24A0A0C4DH68 120 aa10.55□□□□□ -0.72
PRKCSH-217ENST00000592741 NREPQ16612 68 aa10.55□□□□□ -0.72
PRKCSH-217ENST00000592741 MDFIQ99750 246 aa10.55□□□□□ -0.72
PRKCSH-217ENST00000592741 ERC2-IT1O76042 136 aa10.54□□□□□ -0.72
PRKCSH-217ENST00000592741 MGAM2Q2M2H8 2515 aa10.53□□□□□ -0.72
PRKCSH-217ENST00000592741 C3orf84H3BNL1 204 aa10.53□□□□□ -0.72
PRKCSH-217ENST00000592741 FUSP35637 526 aaKnown RBP eCLIP10.53□□□□□ -0.72
PRKCSH-217ENST00000592741 TNP2Q05952 138 aa10.53□□□□□ -0.72
PRKCSH-217ENST00000592741 SMIM20Q8N5G0 67 aa10.53□□□□□ -0.72
PRKCSH-217ENST00000592741 DYNC2H1Q8NCM8 4307 aaKnown RBP10.52□□□□□ -0.73
PRKCSH-217ENST00000592741 A0A1B0GW54 56 aa10.52□□□□□ -0.73
PRKCSH-217ENST00000592741 CYSTM1Q9H1C7 97 aa10.52□□□□□ -0.73
PRKCSH-217ENST00000592741 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.51□□□□□ -0.73
PRKCSH-217ENST00000592741 C1orf137Q5JT78 98 aa10.51□□□□□ -0.73
PRKCSH-217ENST00000592741 TRAV7A0A075B6U4 112 aa10.51□□□□□ -0.73
PRKCSH-217ENST00000592741 A0A1W2PNN7 141 aa10.51□□□□□ -0.73
PRKCSH-217ENST00000592741 NUPR2A6NF83 97 aa10.49□□□□□ -0.73
PRKCSH-217ENST00000592741 DNAH10Q8IVF4 4471 aa10.49□□□□□ -0.73
PRKCSH-217ENST00000592741 A0A1W2PNM2 257 aa10.48□□□□□ -0.73
PRKCSH-217ENST00000592741 BPY2O14599 106 aa10.48□□□□□ -0.73
PRKCSH-217ENST00000592741 TMEM258P61165 79 aa10.48□□□□□ -0.73
PRKCSH-217ENST00000592741 Q8NBF4 154 aa10.48□□□□□ -0.73
PRKCSH-217ENST00000592741 COL7A1Q02388 2944 aa10.47□□□□□ -0.73
PRKCSH-217ENST00000592741 NBDYA0A0U1RRE5 68 aa10.46□□□□□ -0.73
PRKCSH-217ENST00000592741 PKIGQ9Y2B9 76 aa10.46□□□□□ -0.73
PRKCSH-217ENST00000592741 LYSTQ99698 3801 aa10.46□□□□□ -0.74
PRKCSH-217ENST00000592741 F8WEM9 126 aa10.45□□□□□ -0.74
PRKCSH-217ENST00000592741 IGKV4-1P06312 121 aa10.45□□□□□ -0.74
PRKCSH-217ENST00000592741 PRLHP81277 87 aa10.45□□□□□ -0.74
PRKCSH-217ENST00000592741 STAB2Q8WWQ8 2551 aa10.45□□□□□ -0.74
PRKCSH-217ENST00000592741 C20orf197Q8N268 126 aa10.45□□□□□ -0.74
PRKCSH-217ENST00000592741 SMIM29Q86T20 159 aa10.44□□□□□ -0.74
PRKCSH-217ENST00000592741 Q8N9L7 120 aa10.44□□□□□ -0.74
PRKCSH-217ENST00000592741 CHTF8P0CG12 524 aa10.43□□□□□ -0.74
PRKCSH-217ENST00000592741 SPRR4Q96PI1 79 aa10.43□□□□□ -0.74
PRKCSH-217ENST00000592741 LRCOL1A6NCL2 159 aa10.43□□□□□ -0.74
PRKCSH-217ENST00000592741 C9orf163Q8N9P6 203 aa10.43□□□□□ -0.74
PRKCSH-217ENST00000592741 PHF5AQ7RTV0 110 aaKnown RBP10.42□□□□□ -0.74
PRKCSH-217ENST00000592741 LINC00476Q8WZB0 136 aa10.41□□□□□ -0.74
PRKCSH-217ENST00000592741 HIGD2AQ9BW72 106 aa10.41□□□□□ -0.74
PRKCSH-217ENST00000592741 Q6ZRN7 208 aaPredicted RBP10.39□□□□□ -0.75
PRKCSH-217ENST00000592741 J3KT08 172 aa10.38□□□□□ -0.75
PRKCSH-217ENST00000592741 LINC00474Q9P2X8 69 aa10.38□□□□□ -0.75
PRKCSH-217ENST00000592741 PLECQ15149 4684 aaKnown RBP10.37□□□□□ -0.75
PRKCSH-217ENST00000592741 H0Y9J4 135 aa10.36□□□□□ -0.75
PRKCSH-217ENST00000592741 KRTAP11-1Q8IUC1 163 aa10.36□□□□□ -0.75
PRKCSH-217ENST00000592741 KLKP1Q107X0 134 aa10.36□□□□□ -0.75
PRKCSH-217ENST00000592741 IGFL1Q6UW32 110 aa10.36□□□□□ -0.75
PRKCSH-217ENST00000592741 IGLV8-61A0A075B6I0 122 aa10.35□□□□□ -0.75
PRKCSH-217ENST00000592741 EPM2AB3EWF7 344 aa10.35□□□□□ -0.75
PRKCSH-217ENST00000592741 UBE2AP49459 152 aa10.35□□□□□ -0.75
PRKCSH-217ENST00000592741 RPS28P62857 69 aaKnown RBP10.34□□□□□ -0.75
PRKCSH-217ENST00000592741 DNAH7Q8WXX0 4024 aa10.34□□□□□ -0.75
PRKCSH-217ENST00000592741 CSMD3Q7Z407 3707 aa10.33□□□□□ -0.76
PRKCSH-217ENST00000592741 DPH3Q96FX2 82 aa10.33□□□□□ -0.76
PRKCSH-217ENST00000592741 SNURFQ9Y675 71 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms