RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 COX7BP24311 80 aa10.15□□□□□ -0.79
CIRBP-228ENST00000590347 KRTAP1-1Q07627 177 aa10.15□□□□□ -0.79
CIRBP-228ENST00000590347 ST20-AS1Q8NBB2 130 aa10.14□□□□□ -0.79
CIRBP-228ENST00000590347 HIVEP1P15822 2718 aa10.14□□□□□ -0.79
CIRBP-228ENST00000590347 PDE6GP18545 87 aa10.13□□□□□ -0.79
CIRBP-228ENST00000590347 IGLV6-57P01721 117 aa10.13□□□□□ -0.79
CIRBP-228ENST00000590347 C4orf3Q8WVX3 66 aa10.13□□□□□ -0.79
CIRBP-228ENST00000590347 REG3AQ06141 175 aa10.13□□□□□ -0.79
CIRBP-228ENST00000590347 CCL24O00175 119 aa10.12□□□□□ -0.79
CIRBP-228ENST00000590347 HIGD2BQ4VC39 106 aa10.12□□□□□ -0.79
CIRBP-228ENST00000590347 C16orf74Q96GX8 76 aa10.11□□□□□ -0.79
CIRBP-228ENST00000590347 A0A0G2JQZ4 141 aa10.09□□□□□ -0.79
CIRBP-228ENST00000590347 A0A1W2PNN7 141 aa10.09□□□□□ -0.79
CIRBP-228ENST00000590347 SYCNQ0VAF6 134 aa10.09□□□□□ -0.79
CIRBP-228ENST00000590347 CHKB-CPT1BH3BT56 60 aa10.09□□□□□ -0.79
CIRBP-228ENST00000590347 ERC2-IT1O76042 136 aa10.09□□□□□ -0.79
CIRBP-228ENST00000590347 COX17Q14061 63 aa10.09□□□□□ -0.79
CIRBP-228ENST00000590347 NSD1Q96L73 2696 aaPredicted RBP10.09□□□□□ -0.79
CIRBP-228ENST00000590347 MRPL55Q7Z7F7 128 aaKnown RBP10.08□□□□□ -0.8
CIRBP-228ENST00000590347 ANK3Q12955 4377 aaKnown RBP10.08□□□□□ -0.8
CIRBP-228ENST00000590347 Q1T7F1 81 aa10.08□□□□□ -0.8
CIRBP-228ENST00000590347 PKD1L1Q8TDX9 2849 aa10.07□□□□□ -0.8
CIRBP-228ENST00000590347 HTN3P15516 51 aa10.07□□□□□ -0.8
CIRBP-228ENST00000590347 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.07□□□□□ -0.8
CIRBP-228ENST00000590347 CD164Q04900 197 aa10.07□□□□□ -0.8
CIRBP-228ENST00000590347 RBM12B-AS1Q9P1G2 102 aa10.07□□□□□ -0.8
CIRBP-228ENST00000590347 PSCAO43653 123 aa10.05□□□□□ -0.8
CIRBP-228ENST00000590347 TRRAPQ9Y4A5 3859 aa10.04□□□□□ -0.8
CIRBP-228ENST00000590347 C6orf48Q9UBA6 75 aa10.04□□□□□ -0.8
CIRBP-228ENST00000590347 INAFM1C9JVW0 142 aa10.03□□□□□ -0.8
CIRBP-228ENST00000590347 K7EQZ3 153 aa10.03□□□□□ -0.8
CIRBP-228ENST00000590347 ELOF1P60002 83 aaKnown RBP10.03□□□□□ -0.8
CIRBP-228ENST00000590347 Q5VV11 94 aa10.03□□□□□ -0.8
CIRBP-228ENST00000590347 WFDC13Q8IUB5 93 aa10.02□□□□□ -0.8
CIRBP-228ENST00000590347 PRR15LQ9BU68 103 aa10.02□□□□□ -0.81
CIRBP-228ENST00000590347 C16orf90A8MZG2 172 aa10.02□□□□□ -0.81
CIRBP-228ENST00000590347 A0A1B0GUV1 79 aa10.01□□□□□ -0.81
CIRBP-228ENST00000590347 CSNK1G2-AS1Q8NCQ2 148 aa10□□□□□ -0.81
CIRBP-228ENST00000590347 KRTAP10-3P60369 221 aa9.99□□□□□ -0.81
CIRBP-228ENST00000590347 A0A0J9YWU9 116 aa9.97□□□□□ -0.81
CIRBP-228ENST00000590347 WFDC10BQ8IUB3 73 aa9.97□□□□□ -0.81
CIRBP-228ENST00000590347 SRRM2Q9UQ35 2752 aaKnown RBP9.97□□□□□ -0.81
CIRBP-228ENST00000590347 ETDCA0A1B0GVM5 59 aa9.96□□□□□ -0.81
CIRBP-228ENST00000590347 A0A1W2PNM2 257 aa9.96□□□□□ -0.81
CIRBP-228ENST00000590347 HCG22E2RYF7 251 aa9.96□□□□□ -0.81
CIRBP-228ENST00000590347 IGHV4-30-4P0DP06 118 aa9.96□□□□□ -0.81
CIRBP-228ENST00000590347 KPRPQ5T749 579 aaPredicted RBP9.96□□□□□ -0.81
CIRBP-228ENST00000590347 C11orf45Q8TAV5 145 aa9.96□□□□□ -0.81
CIRBP-228ENST00000590347 LINC00208Q96KT6 92 aa9.96□□□□□ -0.82
CIRBP-228ENST00000590347 M0R378 163 aa9.96□□□□□ -0.82
CIRBP-228ENST00000590347 LINC00528Q8N1L1 170 aa9.96□□□□□ -0.82
CIRBP-228ENST00000590347 PRO0255Q9UI72 69 aa9.95□□□□□ -0.82
CIRBP-228ENST00000590347 LINC00588Q9Y4M8 146 aa9.95□□□□□ -0.82
CIRBP-228ENST00000590347 Q8N377 158 aa9.94□□□□□ -0.82
CIRBP-228ENST00000590347 STAB1Q9NY15 2570 aa9.94□□□□□ -0.82
CIRBP-228ENST00000590347 A6NED7 52 aa9.94□□□□□ -0.82
CIRBP-228ENST00000590347 RPL37AP8A6NKH3 93 aa9.93□□□□□ -0.82
CIRBP-228ENST00000590347 VPREB1P12018 145 aa9.93□□□□□ -0.82
CIRBP-228ENST00000590347 DSCR10P59022 87 aa9.93□□□□□ -0.82
CIRBP-228ENST00000590347 ZCCHC13Q8WW36 166 aaKnown RBP9.93□□□□□ -0.82
CIRBP-228ENST00000590347 CAMK2N2Q96S95 79 aa9.93□□□□□ -0.82
CIRBP-228ENST00000590347 UBE2BP63146 152 aa9.93□□□□□ -0.82
CIRBP-228ENST00000590347 LCA10Q71F78 164 aa9.93□□□□□ -0.82
CIRBP-228ENST00000590347 KTN1-AS1Q86SY8 53 aa9.93□□□□□ -0.82
CIRBP-228ENST00000590347 MAST4O15021 2626 aa9.91□□□□□ -0.82
CIRBP-228ENST00000590347 RPL37AP61513 92 aaKnown RBP9.9□□□□□ -0.82
CIRBP-228ENST00000590347 C1orf137Q5JT78 98 aa9.9□□□□□ -0.82
CIRBP-228ENST00000590347 B9D2Q9BPU9 175 aa9.9□□□□□ -0.82
CIRBP-228ENST00000590347 C19orf73Q9NVV2 129 aa9.9□□□□□ -0.82
CIRBP-228ENST00000590347 IGLV1-51P01701 117 aa9.89□□□□□ -0.83
CIRBP-228ENST00000590347 CSMD3Q7Z407 3707 aa9.88□□□□□ -0.83
CIRBP-228ENST00000590347 Q8N9P0 234 aaPredicted RBP9.88□□□□□ -0.83
CIRBP-228ENST00000590347 UBE2AP49459 152 aa9.87□□□□□ -0.83
CIRBP-228ENST00000590347 DEFB135Q30KP9 77 aa9.87□□□□□ -0.83
CIRBP-228ENST00000590347 NOTCH1P46531 2555 aa9.86□□□□□ -0.83
CIRBP-228ENST00000590347 H3BQ85 93 aa9.86□□□□□ -0.83
CIRBP-228ENST00000590347 FBN1P35555 2871 aaKnown RBP9.85□□□□□ -0.83
CIRBP-228ENST00000590347 LCE6AA0A183 80 aa9.84□□□□□ -0.83
CIRBP-228ENST00000590347 SERTAD4-AS1Q5TG53 156 aa9.83□□□□□ -0.84
CIRBP-228ENST00000590347 APOC4P55056 127 aa9.82□□□□□ -0.84
CIRBP-228ENST00000590347 C7orf33Q8WU49 177 aa9.82□□□□□ -0.84
CIRBP-228ENST00000590347 CYP4F30PQ9H0H9 118 aa9.82□□□□□ -0.84
CIRBP-228ENST00000590347 X6R8D5 127 aa9.82□□□□□ -0.84
CIRBP-228ENST00000590347 COL6A5A8TX70 2615 aa9.82□□□□□ -0.84
CIRBP-228ENST00000590347 MP68P56378 58 aa9.81□□□□□ -0.84
CIRBP-228ENST00000590347 FAM168BA1KXE4 195 aa9.8□□□□□ -0.84
CIRBP-228ENST00000590347 NKAPP1Q8N9T2 125 aa9.8□□□□□ -0.84
CIRBP-228ENST00000590347 SPAG11AQ6PDA7 123 aa9.79□□□□□ -0.84
CIRBP-228ENST00000590347 Q8NBF4 154 aa9.79□□□□□ -0.84
CIRBP-228ENST00000590347 PRAC1Q96KF2 57 aa9.78□□□□□ -0.84
CIRBP-228ENST00000590347 Q9BRP9 147 aa9.78□□□□□ -0.84
CIRBP-228ENST00000590347 PCOTHQ58A44 107 aa9.78□□□□□ -0.84
CIRBP-228ENST00000590347 IGLV5-48A0A075B6I7 105 aa9.77□□□□□ -0.85
CIRBP-228ENST00000590347 H0Y9P7 68 aa9.77□□□□□ -0.85
CIRBP-228ENST00000590347 C4orf48Q5BLP8 95 aa9.76□□□□□ -0.85
CIRBP-228ENST00000590347 A6NN06 94 aa9.76□□□□□ -0.85
CIRBP-228ENST00000590347 A0A087WSZ3 146 aa9.74□□□□□ -0.85
CIRBP-228ENST00000590347 COL7A1Q02388 2944 aa9.73□□□□□ -0.85
CIRBP-228ENST00000590347 GVQW2A0A096LPI5 108 aaPredicted RBP9.73□□□□□ -0.85
CIRBP-228ENST00000590347 LIMD2Q9BT23 127 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms