RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 LINC00158P58513 81 aa10.37□□□□□ -0.75
H3F3B-209ENST00000589949 SFTA2Q6UW10 78 aa10.37□□□□□ -0.75
H3F3B-209ENST00000589949 A0A0J9YXY3 114 aa10.36□□□□□ -0.75
H3F3B-209ENST00000589949 HERV-K104P63124 156 aa10.36□□□□□ -0.75
H3F3B-209ENST00000589949 CTAG1AP78358 180 aa10.36□□□□□ -0.75
H3F3B-209ENST00000589949 HIGD2AQ9BW72 106 aa10.35□□□□□ -0.75
H3F3B-209ENST00000589949 LINC00587B1AMM8 73 aa10.34□□□□□ -0.75
H3F3B-209ENST00000589949 SMIM13P0DJ93 91 aa10.34□□□□□ -0.75
H3F3B-209ENST00000589949 TIMM17BO60830 172 aa10.33□□□□□ -0.76
H3F3B-209ENST00000589949 TAL2Q16559 108 aa10.33□□□□□ -0.76
H3F3B-209ENST00000589949 SPRR4Q96PI1 79 aa10.33□□□□□ -0.76
H3F3B-209ENST00000589949 SPANXB1Q9NS25 103 aaPredicted RBP10.33□□□□□ -0.76
H3F3B-209ENST00000589949 HSD52Q0P140 79 aa10.32□□□□□ -0.76
H3F3B-209ENST00000589949 KRTAP3-3Q9BYR6 98 aa10.32□□□□□ -0.76
H3F3B-209ENST00000589949 KRTAP3-2Q9BYR7 98 aa10.32□□□□□ -0.76
H3F3B-209ENST00000589949 IGLV7-46A0A075B6I9 117 aa10.31□□□□□ -0.76
H3F3B-209ENST00000589949 TPRXLQ17RH7 258 aa10.31□□□□□ -0.76
H3F3B-209ENST00000589949 FAT4Q6V0I7 4981 aa10.3□□□□□ -0.76
H3F3B-209ENST00000589949 LCE2AQ5TA79 106 aaPredicted RBP10.3□□□□□ -0.76
H3F3B-209ENST00000589949 M0R143 59 aa10.29□□□□□ -0.76
H3F3B-209ENST00000589949 NCR3O14931 201 aa10.29□□□□□ -0.76
H3F3B-209ENST00000589949 MEIG1Q5JSS6 88 aa10.29□□□□□ -0.76
H3F3B-209ENST00000589949 MIR7-3HGQ8N6C7 128 aa10.29□□□□□ -0.76
H3F3B-209ENST00000589949 HIST1H4GQ99525 98 aa10.29□□□□□ -0.76
H3F3B-209ENST00000589949 LITAFQ99732 161 aa10.29□□□□□ -0.76
H3F3B-209ENST00000589949 KRTAP4-16G5E9R7 235 aaPredicted RBP10.28□□□□□ -0.76
H3F3B-209ENST00000589949 SPRR1AP35321 89 aa10.28□□□□□ -0.76
H3F3B-209ENST00000589949 Q6ZVH6 145 aa10.28□□□□□ -0.76
H3F3B-209ENST00000589949 HINT1P49773 126 aaPredicted RBP10.27□□□□□ -0.77
H3F3B-209ENST00000589949 CEND1Q8N111 149 aa10.27□□□□□ -0.77
H3F3B-209ENST00000589949 SPANXDQ9BXN6 97 aa10.27□□□□□ -0.77
H3F3B-209ENST00000589949 CDIP1Q9H305 208 aa10.27□□□□□ -0.77
H3F3B-209ENST00000589949 KCNQ1DNQ9H478 68 aa10.27□□□□□ -0.77
H3F3B-209ENST00000589949 SPANXCQ9NY87 97 aa10.27□□□□□ -0.77
H3F3B-209ENST00000589949 A0A0U1RQV1 116 aa10.26□□□□□ -0.77
H3F3B-209ENST00000589949 PRYO14603 147 aa10.26□□□□□ -0.77
H3F3B-209ENST00000589949 BVES-AS1Q5T3Y7 98 aa10.26□□□□□ -0.77
H3F3B-209ENST00000589949 ADAMTSL4-AS1Q5T5F5 129 aa10.26□□□□□ -0.77
H3F3B-209ENST00000589949 DAND5Q8N907 189 aa10.26□□□□□ -0.77
H3F3B-209ENST00000589949 MUC17Q685J3 4493 aa10.25□□□□□ -0.77
H3F3B-209ENST00000589949 SMCR5Q8TEV8 140 aa10.25□□□□□ -0.77
H3F3B-209ENST00000589949 SNHG12Q9BXW3 62 aa10.25□□□□□ -0.77
H3F3B-209ENST00000589949 PPDPFQ9H3Y8 114 aa10.25□□□□□ -0.77
H3F3B-209ENST00000589949 TRBV10-3A0A0K0K1G6 114 aa10.24□□□□□ -0.77
H3F3B-209ENST00000589949 IFITM1P13164 125 aa10.24□□□□□ -0.77
H3F3B-209ENST00000589949 LINC00337Q8N6G1 96 aa10.24□□□□□ -0.77
H3F3B-209ENST00000589949 BATFQ16520 125 aa10.22□□□□□ -0.77
H3F3B-209ENST00000589949 SPAG11AQ6PDA7 123 aa10.22□□□□□ -0.77
H3F3B-209ENST00000589949 MUSTN1Q8IVN3 82 aa10.22□□□□□ -0.77
H3F3B-209ENST00000589949 Q8NBF4 154 aa10.22□□□□□ -0.77
H3F3B-209ENST00000589949 COPS9Q8WXC6 57 aa10.22□□□□□ -0.77
H3F3B-209ENST00000589949 ERC2-IT1O76042 136 aa10.21□□□□□ -0.77
H3F3B-209ENST00000589949 FXYD2P54710 66 aa10.21□□□□□ -0.77
H3F3B-209ENST00000589949 KRTAP9-2Q9BYQ4 174 aa10.21□□□□□ -0.77
H3F3B-209ENST00000589949 ZNF706Q9Y5V0 76 aaPredicted RBP10.2□□□□□ -0.78
H3F3B-209ENST00000589949 TMEM238LA0A1B0GVL6 79 aa10.19□□□□□ -0.78
H3F3B-209ENST00000589949 ETDCA0A1B0GVM5 59 aa10.19□□□□□ -0.78
H3F3B-209ENST00000589949 A6NJY4 79 aa10.19□□□□□ -0.78
H3F3B-209ENST00000589949 B5MCH6 92 aa10.19□□□□□ -0.78
H3F3B-209ENST00000589949 LINC00483Q53H64 154 aa10.19□□□□□ -0.78
H3F3B-209ENST00000589949 LINC00308Q8TCZ7 52 aa10.19□□□□□ -0.78
H3F3B-209ENST00000589949 LOC107984156A0A0G2JMH3 177 aa10.18□□□□□ -0.78
H3F3B-209ENST00000589949 A6NDN8 102 aa10.18□□□□□ -0.78
H3F3B-209ENST00000589949 ARL17AQ8IVW1 177 aa10.18□□□□□ -0.78
H3F3B-209ENST00000589949 NPC2P61916 151 aa10.17□□□□□ -0.78
H3F3B-209ENST00000589949 A4D1N5 150 aa10.16□□□□□ -0.78
H3F3B-209ENST00000589949 KRTAP13-3Q3SY46 172 aa10.16□□□□□ -0.78
H3F3B-209ENST00000589949 GAGE2AQ6NT46 116 aa10.16□□□□□ -0.78
H3F3B-209ENST00000589949 SOSTDC1Q6X4U4 206 aa10.16□□□□□ -0.78
H3F3B-209ENST00000589949 Q9BRP9 147 aa10.16□□□□□ -0.78
H3F3B-209ENST00000589949 EIF4EBP3O60516 100 aaPredicted RBP10.15□□□□□ -0.78
H3F3B-209ENST00000589949 C4orf48Q5BLP8 95 aa10.15□□□□□ -0.78
H3F3B-209ENST00000589949 COL5A1-AS1Q5SY13 56 aa10.15□□□□□ -0.78
H3F3B-209ENST00000589949 FP248Q71RG6 208 aaPredicted RBP10.15□□□□□ -0.78
H3F3B-209ENST00000589949 A0A1B0GWB2 263 aa10.14□□□□□ -0.79
H3F3B-209ENST00000589949 NHP2Q9NX24 153 aaKnown RBP10.14□□□□□ -0.79
H3F3B-209ENST00000589949 TRBV10-2A0A0K0K1G8 114 aa10.12□□□□□ -0.79
H3F3B-209ENST00000589949 CFC1BP0CG36 223 aa10.12□□□□□ -0.79
H3F3B-209ENST00000589949 CFC1P0CG37 223 aa10.12□□□□□ -0.79
H3F3B-209ENST00000589949 MOBPQ13875 183 aa10.12□□□□□ -0.79
H3F3B-209ENST00000589949 IGLV9-49A0A0B4J1Y8 123 aa10.11□□□□□ -0.79
H3F3B-209ENST00000589949 SPINK1P00995 79 aa10.11□□□□□ -0.79
H3F3B-209ENST00000589949 Q6ZRX8 168 aa10.11□□□□□ -0.79
H3F3B-209ENST00000589949 KRTAP4-1Q9BYQ7 146 aa10.11□□□□□ -0.79
H3F3B-209ENST00000589949 A0A0B4J2C4 111 aa10.1□□□□□ -0.79
H3F3B-209ENST00000589949 IGLV6-57P01721 117 aa10.1□□□□□ -0.79
H3F3B-209ENST00000589949 K7ERJ3 54 aa10.08□□□□□ -0.8
H3F3B-209ENST00000589949 NDUFC2O95298 119 aa10.08□□□□□ -0.8
H3F3B-209ENST00000589949 Q8N377 158 aa10.08□□□□□ -0.8
H3F3B-209ENST00000589949 RAB37Q96AX2 223 aa10.08□□□□□ -0.8
H3F3B-209ENST00000589949 TAX1BP3O14907 124 aa10.07□□□□□ -0.8
H3F3B-209ENST00000589949 PRO1854Q9UHT4 67 aa10.07□□□□□ -0.8
H3F3B-209ENST00000589949 ASB16-AS1Q495Z4 193 aa10.06□□□□□ -0.8
H3F3B-209ENST00000589949 SSBP3-AS1Q7Z2R9 100 aa10.05□□□□□ -0.8
H3F3B-209ENST00000589949 S100A7L2Q5SY68 101 aa10.04□□□□□ -0.8
H3F3B-209ENST00000589949 ST20-AS1Q8NBB2 130 aa10.04□□□□□ -0.8
H3F3B-209ENST00000589949 TRAV23DV6A0A075B6W5 121 aa10.03□□□□□ -0.8
H3F3B-209ENST00000589949 TRAV13-2A0A0B4J235 113 aa10.03□□□□□ -0.8
H3F3B-209ENST00000589949 C9orf118A6NHY6 69 aa10.03□□□□□ -0.8
H3F3B-209ENST00000589949 RPS29P62273 56 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms