RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 HUWE1Q7Z6Z7 4374 aaKnown RBP12.4□□□□□ -0.43
PRKCSH-209ENST00000589838 IGLV1-50A0A075B6I6 118 aa12.39□□□□□ -0.43
PRKCSH-209ENST00000589838 UBE2DNLQ8IWF7 75 aa12.38□□□□□ -0.43
PRKCSH-209ENST00000589838 COX7CP15954 63 aa12.37□□□□□ -0.43
PRKCSH-209ENST00000589838 A0A087WVE0 104 aa12.36□□□□□ -0.43
PRKCSH-209ENST00000589838 ETDCA0A1B0GVM5 59 aa12.36□□□□□ -0.43
PRKCSH-209ENST00000589838 FAM168BA1KXE4 195 aa12.36□□□□□ -0.43
PRKCSH-209ENST00000589838 SPRR1AP35321 89 aa12.36□□□□□ -0.43
PRKCSH-209ENST00000589838 Q6ZRX8 168 aa12.36□□□□□ -0.43
PRKCSH-209ENST00000589838 Q6ZVQ6 151 aa12.36□□□□□ -0.43
PRKCSH-209ENST00000589838 B9D2Q9BPU9 175 aa12.36□□□□□ -0.43
PRKCSH-209ENST00000589838 RPL37AP8A6NKH3 93 aa12.35□□□□□ -0.43
PRKCSH-209ENST00000589838 M0R2N4 97 aa12.35□□□□□ -0.43
PRKCSH-209ENST00000589838 MRPL55Q7Z7F7 128 aaKnown RBP12.35□□□□□ -0.43
PRKCSH-209ENST00000589838 APLNQ9ULZ1 77 aa12.35□□□□□ -0.43
PRKCSH-209ENST00000589838 NBEAL1Q6ZS30 2694 aa12.35□□□□□ -0.43
PRKCSH-209ENST00000589838 PSCAO43653 123 aa12.34□□□□□ -0.43
PRKCSH-209ENST00000589838 C9orf153Q5TBE3 101 aa12.34□□□□□ -0.43
PRKCSH-209ENST00000589838 KRTAP4-16G5E9R7 235 aaPredicted RBP12.33□□□□□ -0.44
PRKCSH-209ENST00000589838 LINC01547P58512 204 aaPredicted RBP12.32□□□□□ -0.44
PRKCSH-209ENST00000589838 FAM19A5Q7Z5A7 132 aaPredicted RBP12.32□□□□□ -0.44
PRKCSH-209ENST00000589838 CXCL6P80162 114 aa12.31□□□□□ -0.44
PRKCSH-209ENST00000589838 HAMPP81172 84 aa12.31□□□□□ -0.44
PRKCSH-209ENST00000589838 C14orf177Q52M58 125 aa12.31□□□□□ -0.44
PRKCSH-209ENST00000589838 SS18L2Q9UHA2 77 aa12.31□□□□□ -0.44
PRKCSH-209ENST00000589838 CNBPP62633 177 aaKnown RBP12.31□□□□□ -0.44
PRKCSH-209ENST00000589838 FAM19A1Q7Z5A9 133 aa12.31□□□□□ -0.44
PRKCSH-209ENST00000589838 KRTAP7-1Q8IUC3 87 aa12.31□□□□□ -0.44
PRKCSH-209ENST00000589838 SERP2Q8N6R1 65 aa12.31□□□□□ -0.44
PRKCSH-209ENST00000589838 Q8N377 158 aa12.29□□□□□ -0.44
PRKCSH-209ENST00000589838 DEFB105AQ8NG35 78 aa12.29□□□□□ -0.44
PRKCSH-209ENST00000589838 KRTAP1-5Q9BYS1 174 aa12.29□□□□□ -0.44
PRKCSH-209ENST00000589838 DNAH1Q9P2D7 4330 aa12.28□□□□□ -0.44
PRKCSH-209ENST00000589838 MDFIQ99750 246 aa12.28□□□□□ -0.44
PRKCSH-209ENST00000589838 C16orf90A8MZG2 172 aa12.27□□□□□ -0.44
PRKCSH-209ENST00000589838 Q9BRP9 147 aa12.27□□□□□ -0.44
PRKCSH-209ENST00000589838 REG3GQ6UW15 175 aa12.26□□□□□ -0.45
PRKCSH-209ENST00000589838 IGLV5-48A0A075B6I7 105 aa12.25□□□□□ -0.45
PRKCSH-209ENST00000589838 BCE1O60756 84 aa12.25□□□□□ -0.45
PRKCSH-209ENST00000589838 CRYGAP11844 174 aa12.25□□□□□ -0.45
PRKCSH-209ENST00000589838 A0A1B0GW54 56 aa12.23□□□□□ -0.45
PRKCSH-209ENST00000589838 NUPR2A6NF83 97 aa12.23□□□□□ -0.45
PRKCSH-209ENST00000589838 PKIGQ9Y2B9 76 aa12.23□□□□□ -0.45
PRKCSH-209ENST00000589838 MGAM2Q2M2H8 2515 aa12.22□□□□□ -0.45
PRKCSH-209ENST00000589838 A0A096LNI7 61 aa12.22□□□□□ -0.45
PRKCSH-209ENST00000589838 UBE2BP63146 152 aa12.22□□□□□ -0.45
PRKCSH-209ENST00000589838 NREPQ16612 68 aa12.19□□□□□ -0.46
PRKCSH-209ENST00000589838 IGKV2-24A0A0C4DH68 120 aa12.19□□□□□ -0.46
PRKCSH-209ENST00000589838 FUSP35637 526 aaKnown RBP eCLIP12.19□□□□□ -0.46
PRKCSH-209ENST00000589838 SMIM20Q8N5G0 67 aa12.18□□□□□ -0.46
PRKCSH-209ENST00000589838 ST20-AS1Q8NBB2 130 aa12.18□□□□□ -0.46
PRKCSH-209ENST00000589838 NBDYA0A0U1RRE5 68 aa12.16□□□□□ -0.46
PRKCSH-209ENST00000589838 TNP2Q05952 138 aa12.16□□□□□ -0.46
PRKCSH-209ENST00000589838 DNAH9Q9NYC9 4486 aa12.16□□□□□ -0.46
PRKCSH-209ENST00000589838 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.15□□□□□ -0.46
PRKCSH-209ENST00000589838 A0A1W2PNN7 141 aa12.15□□□□□ -0.46
PRKCSH-209ENST00000589838 ERC2-IT1O76042 136 aa12.15□□□□□ -0.46
PRKCSH-209ENST00000589838 C1orf137Q5JT78 98 aa12.14□□□□□ -0.47
PRKCSH-209ENST00000589838 SCXQ7RTU7 201 aa12.12□□□□□ -0.47
PRKCSH-209ENST00000589838 TRAV7A0A075B6U4 112 aa12.12□□□□□ -0.47
PRKCSH-209ENST00000589838 C9orf163Q8N9P6 203 aa12.12□□□□□ -0.47
PRKCSH-209ENST00000589838 F8WEM9 126 aa12.1□□□□□ -0.47
PRKCSH-209ENST00000589838 C3orf84H3BNL1 204 aa12.1□□□□□ -0.47
PRKCSH-209ENST00000589838 DYNC2H1Q8NCM8 4307 aaKnown RBP12.1□□□□□ -0.47
PRKCSH-209ENST00000589838 STAB2Q8WWQ8 2551 aa12.1□□□□□ -0.47
PRKCSH-209ENST00000589838 LRCOL1A6NCL2 159 aa12.1□□□□□ -0.47
PRKCSH-209ENST00000589838 BPY2O14599 106 aa12.1□□□□□ -0.47
PRKCSH-209ENST00000589838 Q8NBF4 154 aa12.1□□□□□ -0.47
PRKCSH-209ENST00000589838 LINC00474Q9P2X8 69 aa12.1□□□□□ -0.47
PRKCSH-209ENST00000589838 COL7A1Q02388 2944 aa12.09□□□□□ -0.47
PRKCSH-209ENST00000589838 A0A1W2PNM2 257 aa12.09□□□□□ -0.47
PRKCSH-209ENST00000589838 SPRR4Q96PI1 79 aa12.07□□□□□ -0.48
PRKCSH-209ENST00000589838 SMIM29Q86T20 159 aa12.06□□□□□ -0.48
PRKCSH-209ENST00000589838 H0Y9J4 135 aa12.05□□□□□ -0.48
PRKCSH-209ENST00000589838 PRLHP81277 87 aa12.05□□□□□ -0.48
PRKCSH-209ENST00000589838 TMEM258P61165 79 aa12.04□□□□□ -0.48
PRKCSH-209ENST00000589838 Q6ZRN7 208 aaPredicted RBP12.04□□□□□ -0.48
PRKCSH-209ENST00000589838 CHTF8P0CG12 524 aa12.04□□□□□ -0.48
PRKCSH-209ENST00000589838 PHF5AQ7RTV0 110 aaKnown RBP12.04□□□□□ -0.48
PRKCSH-209ENST00000589838 IGKV4-1P06312 121 aa12.03□□□□□ -0.48
PRKCSH-209ENST00000589838 HIGD2AQ9BW72 106 aa12.03□□□□□ -0.48
PRKCSH-209ENST00000589838 LINC00476Q8WZB0 136 aa12.02□□□□□ -0.49
PRKCSH-209ENST00000589838 CYSTM1Q9H1C7 97 aa12□□□□□ -0.49
PRKCSH-209ENST00000589838 IGLV8-61A0A075B6I0 122 aa12□□□□□ -0.49
PRKCSH-209ENST00000589838 C20orf197Q8N268 126 aa12□□□□□ -0.49
PRKCSH-209ENST00000589838 EPM2AB3EWF7 344 aa11.97□□□□□ -0.49
PRKCSH-209ENST00000589838 Q8N9L7 120 aa11.97□□□□□ -0.49
PRKCSH-209ENST00000589838 UBE2AP49459 152 aa11.97□□□□□ -0.49
PRKCSH-209ENST00000589838 KRTAP21-3Q3LHN1 58 aa11.97□□□□□ -0.49
PRKCSH-209ENST00000589838 DNAH10Q8IVF4 4471 aa11.97□□□□□ -0.49
PRKCSH-209ENST00000589838 SPRR1BP22528 89 aa11.95□□□□□ -0.5
PRKCSH-209ENST00000589838 IGFL1Q6UW32 110 aa11.95□□□□□ -0.5
PRKCSH-209ENST00000589838 DPH3Q96FX2 82 aa11.95□□□□□ -0.5
PRKCSH-209ENST00000589838 KRTAP11-1Q8IUC1 163 aa11.94□□□□□ -0.5
PRKCSH-209ENST00000589838 RPS28P62857 69 aaKnown RBP11.92□□□□□ -0.5
PRKCSH-209ENST00000589838 KLKP1Q107X0 134 aa11.92□□□□□ -0.5
PRKCSH-209ENST00000589838 A0A087WTM6 91 aa11.91□□□□□ -0.5
PRKCSH-209ENST00000589838 J3KT08 172 aa11.91□□□□□ -0.5
PRKCSH-209ENST00000589838 SPACA4Q8TDM5 124 aa11.89□□□□□ -0.51
PRKCSH-209ENST00000589838 LYSTQ99698 3801 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms