RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 LINC00304Q8N9R0 145 aa8.38□□□□□ -1.07
MBD1-220ENST00000589758 TRBV10-2A0A0K0K1G8 114 aa8.37□□□□□ -1.07
MBD1-220ENST00000589758 S100A12P80511 92 aa8.36□□□□□ -1.07
MBD1-220ENST00000589758 KCNQ1DNQ9H478 68 aa8.36□□□□□ -1.07
MBD1-220ENST00000589758 SPANXDQ9BXN6 97 aa8.35□□□□□ -1.07
MBD1-220ENST00000589758 SPANXCQ9NY87 97 aa8.35□□□□□ -1.07
MBD1-220ENST00000589758 ETDCA0A1B0GVM5 59 aa8.34□□□□□ -1.07
MBD1-220ENST00000589758 OR13C6PQ8NH95 151 aa8.34□□□□□ -1.07
MBD1-220ENST00000589758 HIGD2AQ9BW72 106 aa8.34□□□□□ -1.07
MBD1-220ENST00000589758 A0A0U1RQV1 116 aa8.33□□□□□ -1.08
MBD1-220ENST00000589758 IGLV6-57P01721 117 aa8.32□□□□□ -1.08
MBD1-220ENST00000589758 SPRR1AP35321 89 aa8.32□□□□□ -1.08
MBD1-220ENST00000589758 MUSTN1Q8IVN3 82 aa8.32□□□□□ -1.08
MBD1-220ENST00000589758 LINC00337Q8N6G1 96 aa8.32□□□□□ -1.08
MBD1-220ENST00000589758 TRAV23DV6A0A075B6W5 121 aa8.31□□□□□ -1.08
MBD1-220ENST00000589758 RETNLBQ9BQ08 111 aa8.31□□□□□ -1.08
MBD1-220ENST00000589758 ZNF706Q9Y5V0 76 aaPredicted RBP8.31□□□□□ -1.08
MBD1-220ENST00000589758 KRTAP4-16G5E9R7 235 aaPredicted RBP8.3□□□□□ -1.08
MBD1-220ENST00000589758 IFITM1P13164 125 aa8.3□□□□□ -1.08
MBD1-220ENST00000589758 JOSD1Q15040 202 aaPredicted RBP8.3□□□□□ -1.08
MBD1-220ENST00000589758 SPAG11AQ6PDA7 123 aa8.3□□□□□ -1.08
MBD1-220ENST00000589758 C3orf22Q8N5N4 141 aa8.3□□□□□ -1.08
MBD1-220ENST00000589758 COPS9Q8WXC6 57 aa8.3□□□□□ -1.08
MBD1-220ENST00000589758 SPRR4Q96PI1 79 aa8.3□□□□□ -1.08
MBD1-220ENST00000589758 PAM16Q9Y3D7 125 aa8.3□□□□□ -1.08
MBD1-220ENST00000589758 SPATA45Q537H7 98 aa8.29□□□□□ -1.08
MBD1-220ENST00000589758 Q6ZVH6 145 aa8.29□□□□□ -1.08
MBD1-220ENST00000589758 KRTAP9-2Q9BYQ4 174 aa8.29□□□□□ -1.08
MBD1-220ENST00000589758 B5MCH6 92 aa8.28□□□□□ -1.08
MBD1-220ENST00000589758 COX8AP10176 69 aa8.28□□□□□ -1.08
MBD1-220ENST00000589758 TPRXLQ17RH7 258 aa8.28□□□□□ -1.08
MBD1-220ENST00000589758 LINC00518Q8N0U6 118 aa8.28□□□□□ -1.08
MBD1-220ENST00000589758 SMCR5Q8TEV8 140 aa8.28□□□□□ -1.08
MBD1-220ENST00000589758 VAMP8Q9BV40 100 aa8.28□□□□□ -1.08
MBD1-220ENST00000589758 IGLV7-46A0A075B6I9 117 aa8.27□□□□□ -1.09
MBD1-220ENST00000589758 ZNF73O43830 326 aaPredicted RBP8.27□□□□□ -1.09
MBD1-220ENST00000589758 C14orf144Q96I85 54 aa8.27□□□□□ -1.09
MBD1-220ENST00000589758 C4orf48Q5BLP8 95 aa8.26□□□□□ -1.09
MBD1-220ENST00000589758 CDIP1Q9H305 208 aa8.26□□□□□ -1.09
MBD1-220ENST00000589758 A6NDN8 102 aa8.25□□□□□ -1.09
MBD1-220ENST00000589758 Q6ZRX8 168 aa8.25□□□□□ -1.09
MBD1-220ENST00000589758 CBY1Q9Y3M2 126 aa8.25□□□□□ -1.09
MBD1-220ENST00000589758 MUC2Q02817 5179 aa8.24□□□□□ -1.09
MBD1-220ENST00000589758 HINT1P49773 126 aaPredicted RBP8.24□□□□□ -1.09
MBD1-220ENST00000589758 PYY3Q5JQD4 70 aa8.24□□□□□ -1.09
MBD1-220ENST00000589758 HIST1H4GQ99525 98 aa8.24□□□□□ -1.09
MBD1-220ENST00000589758 PPDPFQ9H3Y8 114 aa8.24□□□□□ -1.09
MBD1-220ENST00000589758 ERC2-IT1O76042 136 aa8.23□□□□□ -1.09
MBD1-220ENST00000589758 Q9BRP9 147 aa8.23□□□□□ -1.09
MBD1-220ENST00000589758 DLEU1O43261 78 aa8.22□□□□□ -1.09
MBD1-220ENST00000589758 A4D1N5 150 aa8.21□□□□□ -1.1
MBD1-220ENST00000589758 C6orf99Q4VX62 202 aa8.21□□□□□ -1.1
MBD1-220ENST00000589758 SLC25A34Q6PIV7 304 aa8.21□□□□□ -1.1
MBD1-220ENST00000589758 FP248Q71RG6 208 aaPredicted RBP8.21□□□□□ -1.1
MBD1-220ENST00000589758 LINC00483Q53H64 154 aa8.2□□□□□ -1.1
MBD1-220ENST00000589758 GAGE2AQ6NT46 116 aa8.2□□□□□ -1.1
MBD1-220ENST00000589758 Q8NBF4 154 aa8.2□□□□□ -1.1
MBD1-220ENST00000589758 C12orf57Q99622 126 aa8.2□□□□□ -1.1
MBD1-220ENST00000589758 TRAV13-2A0A0B4J235 113 aa8.19□□□□□ -1.1
MBD1-220ENST00000589758 SPINK1P00995 79 aa8.19□□□□□ -1.1
MBD1-220ENST00000589758 COX7BP24311 80 aa8.19□□□□□ -1.1
MBD1-220ENST00000589758 MUC17Q685J3 4493 aa8.19□□□□□ -1.1
MBD1-220ENST00000589758 HIGD1BQ9P298 99 aa8.17□□□□□ -1.1
MBD1-220ENST00000589758 KRTAP9-6A0A140TA67 174 aa8.16□□□□□ -1.1
MBD1-220ENST00000589758 ELOF1P60002 83 aaKnown RBP8.16□□□□□ -1.1
MBD1-220ENST00000589758 C2orf91Q6ZV80 131 aa8.16□□□□□ -1.1
MBD1-220ENST00000589758 ST20-AS1Q8NBB2 130 aa8.16□□□□□ -1.1
MBD1-220ENST00000589758 SMIM11BQ8TCY0 68 aa8.16□□□□□ -1.1
MBD1-220ENST00000589758 SSBP3-AS1Q7Z2R9 100 aa8.15□□□□□ -1.1
MBD1-220ENST00000589758 DHRS4-AS1Q9P1J3 65 aa8.15□□□□□ -1.1
MBD1-220ENST00000589758 RPS29P62273 56 aaKnown RBP8.14□□□□□ -1.11
MBD1-220ENST00000589758 FAT4Q6V0I7 4981 aa8.14□□□□□ -1.11
MBD1-220ENST00000589758 A0A1B0GWB2 263 aa8.13□□□□□ -1.11
MBD1-220ENST00000589758 MOBPQ13875 183 aa8.13□□□□□ -1.11
MBD1-220ENST00000589758 IGLV9-49A0A0B4J1Y8 123 aa8.12□□□□□ -1.11
MBD1-220ENST00000589758 TRBV7-6A0A0J9YX20 115 aa8.12□□□□□ -1.11
MBD1-220ENST00000589758 KRTAP13-3Q3SY46 172 aa8.12□□□□□ -1.11
MBD1-220ENST00000589758 H7C2G1 150 aa8.1□□□□□ -1.11
MBD1-220ENST00000589758 TAL2Q16559 108 aa8.1□□□□□ -1.11
MBD1-220ENST00000589758 LCE2AQ5TA79 106 aaPredicted RBP8.1□□□□□ -1.11
MBD1-220ENST00000589758 CEND1Q8N111 149 aa8.1□□□□□ -1.11
MBD1-220ENST00000589758 DEFB105AQ8NG35 78 aa8.1□□□□□ -1.11
MBD1-220ENST00000589758 RAB37Q96AX2 223 aa8.1□□□□□ -1.11
MBD1-220ENST00000589758 CFC1BP0CG36 223 aa8.09□□□□□ -1.11
MBD1-220ENST00000589758 CFC1P0CG37 223 aa8.09□□□□□ -1.11
MBD1-220ENST00000589758 VAMP3Q15836 100 aa8.09□□□□□ -1.11
MBD1-220ENST00000589758 SLC25A20O43772 301 aa8.08□□□□□ -1.12
MBD1-220ENST00000589758 C9orf153Q5TBE3 101 aa8.08□□□□□ -1.12
MBD1-220ENST00000589758 Q8N377 158 aa8.08□□□□□ -1.12
MBD1-220ENST00000589758 UQCR10Q9UDW1 63 aa8.07□□□□□ -1.12
MBD1-220ENST00000589758 FXYD2P54710 66 aa8.06□□□□□ -1.12
MBD1-220ENST00000589758 ASB16-AS1Q495Z4 193 aa8.06□□□□□ -1.12
MBD1-220ENST00000589758 A0A0B4J2C4 111 aa8.05□□□□□ -1.12
MBD1-220ENST00000589758 TMEM238LA0A1B0GVL6 79 aa8.05□□□□□ -1.12
MBD1-220ENST00000589758 A6NJY4 79 aa8.05□□□□□ -1.12
MBD1-220ENST00000589758 HSD52Q0P140 79 aa8.05□□□□□ -1.12
MBD1-220ENST00000589758 PRO1933Q9H354 126 aa8.05□□□□□ -1.12
MBD1-220ENST00000589758 NHP2Q9NX24 153 aaKnown RBP8.05□□□□□ -1.12
MBD1-220ENST00000589758 SPRR1BP22528 89 aa8.04□□□□□ -1.12
MBD1-220ENST00000589758 Q1RN00 199 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 337.8 ms