RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 TLN2Q9Y4G6 2542 aa9.75□□□□□ -0.85
SMARCA4-214ENST00000589677 USP9YO00507 2555 aaPredicted RBP9.75□□□□□ -0.85
SMARCA4-214ENST00000589677 IGLV1-50A0A075B6I6 118 aa9.75□□□□□ -0.85
SMARCA4-214ENST00000589677 Q5XG85 94 aa9.75□□□□□ -0.85
SMARCA4-214ENST00000589677 SPEGQ15772 3267 aa9.75□□□□□ -0.85
SMARCA4-214ENST00000589677 VPS13AQ96RL7 3174 aa9.75□□□□□ -0.85
SMARCA4-214ENST00000589677 C16orf90A8MZG2 172 aa9.74□□□□□ -0.85
SMARCA4-214ENST00000589677 CDC42SE1Q9NRR8 79 aa9.74□□□□□ -0.85
SMARCA4-214ENST00000589677 Q8N377 158 aa9.73□□□□□ -0.85
SMARCA4-214ENST00000589677 PCSK5Q92824 1860 aa9.73□□□□□ -0.85
SMARCA4-214ENST00000589677 LINC00313P59037 77 aa9.73□□□□□ -0.85
SMARCA4-214ENST00000589677 IGFL1Q6UW32 110 aa9.72□□□□□ -0.85
SMARCA4-214ENST00000589677 FAM229AH3BQW9 127 aa9.72□□□□□ -0.85
SMARCA4-214ENST00000589677 MIR22HGQ0VDD5 57 aa9.72□□□□□ -0.85
SMARCA4-214ENST00000589677 PHF5AQ7RTV0 110 aaKnown RBP9.71□□□□□ -0.86
SMARCA4-214ENST00000589677 SPINT4Q6UDR6 99 aa9.7□□□□□ -0.86
SMARCA4-214ENST00000589677 LY6G6CO95867 125 aa9.7□□□□□ -0.86
SMARCA4-214ENST00000589677 IGLV8-61A0A075B6I0 122 aa9.69□□□□□ -0.86
SMARCA4-214ENST00000589677 Q8NAQ8 132 aa9.69□□□□□ -0.86
SMARCA4-214ENST00000589677 ZNF575Q86XF7 245 aa9.69□□□□□ -0.86
SMARCA4-214ENST00000589677 OCR1Q9BZK8 76 aa9.69□□□□□ -0.86
SMARCA4-214ENST00000589677 PKD1L2Q7Z442 2459 aa9.68□□□□□ -0.86
SMARCA4-214ENST00000589677 MDFIQ99750 246 aa9.68□□□□□ -0.86
SMARCA4-214ENST00000589677 PRR34Q9NV39 138 aa9.68□□□□□ -0.86
SMARCA4-214ENST00000589677 CSNK1G2-AS1Q8NCQ2 148 aa9.67□□□□□ -0.86
SMARCA4-214ENST00000589677 C8orf17Q9NRJ1 99 aa9.67□□□□□ -0.86
SMARCA4-214ENST00000589677 FLNBO75369 2602 aaKnown RBP9.66□□□□□ -0.86
SMARCA4-214ENST00000589677 COL6A3P12111 3177 aa9.66□□□□□ -0.86
SMARCA4-214ENST00000589677 FN1P02751 2386 aaKnown RBP9.66□□□□□ -0.86
SMARCA4-214ENST00000589677 FAM168BA1KXE4 195 aa9.65□□□□□ -0.87
SMARCA4-214ENST00000589677 TNRC18O15417 2968 aaPredicted RBP9.63□□□□□ -0.87
SMARCA4-214ENST00000589677 PLA2G2DQ9UNK4 145 aa9.63□□□□□ -0.87
SMARCA4-214ENST00000589677 DNAH10OSP0CZ25 163 aa9.63□□□□□ -0.87
SMARCA4-214ENST00000589677 FRYLO94915 3013 aa9.62□□□□□ -0.87
SMARCA4-214ENST00000589677 C1orf134Q5TEV5 83 aa9.62□□□□□ -0.87
SMARCA4-214ENST00000589677 A0A1W2PNM2 257 aa9.62□□□□□ -0.87
SMARCA4-214ENST00000589677 SPACA4Q8TDM5 124 aa9.62□□□□□ -0.87
SMARCA4-214ENST00000589677 DOPEY1Q5JWR5 2465 aa9.62□□□□□ -0.87
SMARCA4-214ENST00000589677 SSBP3-AS1Q7Z2R9 100 aa9.61□□□□□ -0.87
SMARCA4-214ENST00000589677 MYO15AQ9UKN7 3530 aa9.61□□□□□ -0.87
SMARCA4-214ENST00000589677 IGLV5-48A0A075B6I7 105 aa9.6□□□□□ -0.87
SMARCA4-214ENST00000589677 A0A1B0GVX0 72 aa9.6□□□□□ -0.87
SMARCA4-214ENST00000589677 FP248Q71RG6 208 aaPredicted RBP9.59□□□□□ -0.87
SMARCA4-214ENST00000589677 LINC00612Q8N6U2 182 aa9.59□□□□□ -0.87
SMARCA4-214ENST00000589677 C15orf56Q8N910 161 aa9.59□□□□□ -0.87
SMARCA4-214ENST00000589677 SETD2Q9BYW2 2564 aaPredicted RBP9.59□□□□□ -0.87
SMARCA4-214ENST00000589677 TLX1NBP0CAT3 122 aa9.58□□□□□ -0.88
SMARCA4-214ENST00000589677 RBM12B-AS1Q9P1G2 102 aa9.58□□□□□ -0.88
SMARCA4-214ENST00000589677 CYSTM1Q9H1C7 97 aa9.58□□□□□ -0.88
SMARCA4-214ENST00000589677 LINC00588Q9Y4M8 146 aa9.58□□□□□ -0.88
SMARCA4-214ENST00000589677 WDFY4Q6ZS81 3184 aa9.57□□□□□ -0.88
SMARCA4-214ENST00000589677 POLQO75417 2590 aa9.57□□□□□ -0.88
SMARCA4-214ENST00000589677 Q75L30 129 aa9.55□□□□□ -0.88
SMARCA4-214ENST00000589677 GIG44P09565 113 aaPredicted RBP9.54□□□□□ -0.88
SMARCA4-214ENST00000589677 FAM104AQ969W3 186 aa9.54□□□□□ -0.88
SMARCA4-214ENST00000589677 USP34Q70CQ2 3546 aa9.53□□□□□ -0.88
SMARCA4-214ENST00000589677 CFAP54Q96N23 3096 aa9.52□□□□□ -0.89
SMARCA4-214ENST00000589677 CELSR3Q9NYQ7 3312 aa9.52□□□□□ -0.89
SMARCA4-214ENST00000589677 MTORP42345 2549 aa9.51□□□□□ -0.89
SMARCA4-214ENST00000589677 ANKRD17O75179 2603 aaKnown RBP9.51□□□□□ -0.89
SMARCA4-214ENST00000589677 CHTF8P0CG12 524 aa9.51□□□□□ -0.89
SMARCA4-214ENST00000589677 FAM229BQ4G0N7 80 aa9.51□□□□□ -0.89
SMARCA4-214ENST00000589677 A0A096LNT2 108 aa9.5□□□□□ -0.89
SMARCA4-214ENST00000589677 Q96NJ1 140 aa9.49□□□□□ -0.89
SMARCA4-214ENST00000589677 A0A0G2JQZ4 141 aa9.49□□□□□ -0.89
SMARCA4-214ENST00000589677 A0A1W2PNN7 141 aa9.49□□□□□ -0.89
SMARCA4-214ENST00000589677 IGLV7-46A0A075B6I9 117 aa9.48□□□□□ -0.89
SMARCA4-214ENST00000589677 C19orf73Q9NVV2 129 aa9.48□□□□□ -0.89
SMARCA4-214ENST00000589677 DSCR10P59022 87 aa9.48□□□□□ -0.89
SMARCA4-214ENST00000589677 SPRR4Q96PI1 79 aa9.48□□□□□ -0.89
SMARCA4-214ENST00000589677 CRIPTQ9P021 101 aa9.47□□□□□ -0.89
SMARCA4-214ENST00000589677 F8P00451 2351 aa9.47□□□□□ -0.89
SMARCA4-214ENST00000589677 RTL8CO15255 209 aa9.46□□□□□ -0.89
SMARCA4-214ENST00000589677 NBDYA0A0U1RRE5 68 aa9.46□□□□□ -0.9
SMARCA4-214ENST00000589677 OXTP01178 125 aa9.45□□□□□ -0.9
SMARCA4-214ENST00000589677 Q8N9P0 234 aaPredicted RBP9.45□□□□□ -0.9
SMARCA4-214ENST00000589677 IGLV5-37A0A075B6J1 123 aa9.44□□□□□ -0.9
SMARCA4-214ENST00000589677 LINC01558Q9Y6Z2 57 aa9.43□□□□□ -0.9
SMARCA4-214ENST00000589677 HECTD1Q9ULT8 2610 aa9.42□□□□□ -0.9
SMARCA4-214ENST00000589677 TYMSOSQ8TAI1 123 aa9.42□□□□□ -0.9
SMARCA4-214ENST00000589677 ZNF292O60281 2723 aa9.42□□□□□ -0.9
SMARCA4-214ENST00000589677 LINC01554Q52M75 96 aa9.42□□□□□ -0.9
SMARCA4-214ENST00000589677 MGAQ8IWI9 3026 aa9.41□□□□□ -0.9
SMARCA4-214ENST00000589677 ACANP16112 2415 aa9.41□□□□□ -0.9
SMARCA4-214ENST00000589677 KRTAP24-1Q3LI83 254 aa9.39□□□□□ -0.91
SMARCA4-214ENST00000589677 FREM2Q5SZK8 3169 aa9.38□□□□□ -0.91
SMARCA4-214ENST00000589677 Q5VV11 94 aa9.38□□□□□ -0.91
SMARCA4-214ENST00000589677 PRR26Q8N8Z3 221 aa9.38□□□□□ -0.91
SMARCA4-214ENST00000589677 ZNF861PO60384 105 aa9.36□□□□□ -0.91
SMARCA4-214ENST00000589677 C9orf163Q8N9P6 203 aa9.36□□□□□ -0.91
SMARCA4-214ENST00000589677 MUC3AQ02505 3323 aa9.35□□□□□ -0.91
SMARCA4-214ENST00000589677 DSPP15924 2871 aaKnown RBP9.35□□□□□ -0.91
SMARCA4-214ENST00000589677 H3BS24 57 aa9.33□□□□□ -0.92
SMARCA4-214ENST00000589677 APLNQ9ULZ1 77 aa9.32□□□□□ -0.92
SMARCA4-214ENST00000589677 FRYQ5TBA9 3013 aa9.3□□□□□ -0.92
SMARCA4-214ENST00000589677 CNBPP62633 177 aaKnown RBP9.29□□□□□ -0.92
SMARCA4-214ENST00000589677 AKAP13Q12802 2813 aa9.28□□□□□ -0.92
SMARCA4-214ENST00000589677 BOD1L1Q8NFC6 3051 aa9.26□□□□□ -0.93
SMARCA4-214ENST00000589677 PLA2G1BP04054 148 aaKnown RBP9.25□□□□□ -0.93
SMARCA4-214ENST00000589677 PRAC1Q96KF2 57 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 484.4 ms