RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 USMG5Q96IX5 58 aa4.23□□□□□ -1.73
AP000547.3-204ENST00000588548 GCN1Q92616 2671 aaKnown RBP4.22□□□□□ -1.73
AP000547.3-204ENST00000588548 LINC00959A0A1B0GUT2 108 aa4.22□□□□□ -1.73
AP000547.3-204ENST00000588548 C5orf56Q8N8D9 126 aa4.22□□□□□ -1.73
AP000547.3-204ENST00000588548 NBPF19A0A087WUL8 3843 aa4.22□□□□□ -1.73
AP000547.3-204ENST00000588548 IGHV4-28A0A0C4DH34 117 aa4.22□□□□□ -1.73
AP000547.3-204ENST00000588548 K7EQZ3 153 aa4.22□□□□□ -1.73
AP000547.3-204ENST00000588548 TENM4Q6N022 2769 aa4.21□□□□□ -1.73
AP000547.3-204ENST00000588548 DNAJC9-AS1A6NH13 148 aa4.21□□□□□ -1.74
AP000547.3-204ENST00000588548 ZNF702PQ9H963 129 aa4.21□□□□□ -1.74
AP000547.3-204ENST00000588548 IGLV7-46A0A075B6I9 117 aa4.21□□□□□ -1.74
AP000547.3-204ENST00000588548 CSAG1Q6PB30 78 aa4.21□□□□□ -1.74
AP000547.3-204ENST00000588548 ABCA2Q9BZC7 2435 aa4.21□□□□□ -1.74
AP000547.3-204ENST00000588548 CENPEQ02224 2701 aa4.2□□□□□ -1.74
AP000547.3-204ENST00000588548 C1orf134Q5TEV5 83 aa4.2□□□□□ -1.74
AP000547.3-204ENST00000588548 Q6ZR54 194 aa4.2□□□□□ -1.74
AP000547.3-204ENST00000588548 WNK1Q9H4A3 2382 aa4.2□□□□□ -1.74
AP000547.3-204ENST00000588548 USP9XQ93008 2570 aaPredicted RBP4.2□□□□□ -1.74
AP000547.3-204ENST00000588548 H0Y9P7 68 aa4.2□□□□□ -1.74
AP000547.3-204ENST00000588548 H3BUA1 57 aa4.2□□□□□ -1.74
AP000547.3-204ENST00000588548 DEFB112Q30KQ8 113 aa4.2□□□□□ -1.74
AP000547.3-204ENST00000588548 FLNBO75369 2602 aaKnown RBP4.19□□□□□ -1.74
AP000547.3-204ENST00000588548 IGLV5-48A0A075B6I7 105 aa4.19□□□□□ -1.74
AP000547.3-204ENST00000588548 IGKV2D-24A0A075B6R9 120 aa4.19□□□□□ -1.74
AP000547.3-204ENST00000588548 IGLV1-40P01703 118 aa4.19□□□□□ -1.74
AP000547.3-204ENST00000588548 LRRK2Q5S007 2527 aa4.19□□□□□ -1.74
AP000547.3-204ENST00000588548 ZANQ9Y493 2812 aa4.19□□□□□ -1.74
AP000547.3-204ENST00000588548 HECTD1Q9ULT8 2610 aa4.18□□□□□ -1.74
AP000547.3-204ENST00000588548 KPRPQ5T749 579 aaPredicted RBP4.18□□□□□ -1.74
AP000547.3-204ENST00000588548 FBN2P35556 2912 aa4.18□□□□□ -1.74
AP000547.3-204ENST00000588548 POLQO75417 2590 aa4.18□□□□□ -1.74
AP000547.3-204ENST00000588548 BRD3OSQ6XYD6 125 aa4.17□□□□□ -1.74
AP000547.3-204ENST00000588548 BAHCC1Q9P281 2608 aa4.17□□□□□ -1.74
AP000547.3-204ENST00000588548 IGLV1-50A0A075B6I6 118 aa4.16□□□□□ -1.74
AP000547.3-204ENST00000588548 TRGV1A0A0A0MS02 117 aa4.16□□□□□ -1.74
AP000547.3-204ENST00000588548 CUBNO60494 3623 aa4.16□□□□□ -1.74
AP000547.3-204ENST00000588548 ROMO1P60602 79 aa4.16□□□□□ -1.74
AP000547.3-204ENST00000588548 DEFB116Q30KQ4 102 aa4.16□□□□□ -1.74
AP000547.3-204ENST00000588548 LCE2CQ5TA81 110 aa4.16□□□□□ -1.74
AP000547.3-204ENST00000588548 SPRR4Q96PI1 79 aa4.16□□□□□ -1.74
AP000547.3-204ENST00000588548 SETXQ7Z333 2677 aaKnown RBP4.15□□□□□ -1.74
AP000547.3-204ENST00000588548 KRTAP29-1A8MX34 341 aaPredicted RBP4.15□□□□□ -1.74
AP000547.3-204ENST00000588548 INSP01308 110 aa4.15□□□□□ -1.74
AP000547.3-204ENST00000588548 Q8NBF4 154 aa4.15□□□□□ -1.74
AP000547.3-204ENST00000588548 CSPG4Q6UVK1 2322 aa4.15□□□□□ -1.75
AP000547.3-204ENST00000588548 USP9YO00507 2555 aaPredicted RBP4.15□□□□□ -1.75
AP000547.3-204ENST00000588548 NOTCH2Q04721 2471 aa4.15□□□□□ -1.75
AP000547.3-204ENST00000588548 WFDC13Q8IUB5 93 aa4.15□□□□□ -1.75
AP000547.3-204ENST00000588548 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.15□□□□□ -1.75
AP000547.3-204ENST00000588548 ZNF469Q96JG9 3925 aaPredicted RBP4.14□□□□□ -1.75
AP000547.3-204ENST00000588548 C2CD3Q4AC94 2353 aa4.14□□□□□ -1.75
AP000547.3-204ENST00000588548 DOPEY1Q5JWR5 2465 aa4.14□□□□□ -1.75
AP000547.3-204ENST00000588548 PTPN13Q12923 2485 aa4.14□□□□□ -1.75
AP000547.3-204ENST00000588548 DEFB131AP59861 70 aa4.14□□□□□ -1.75
AP000547.3-204ENST00000588548 LY6EQ16553 131 aa4.14□□□□□ -1.75
AP000547.3-204ENST00000588548 Q8N377 158 aa4.14□□□□□ -1.75
AP000547.3-204ENST00000588548 C19orf73Q9NVV2 129 aa4.14□□□□□ -1.75
AP000547.3-204ENST00000588548 IGLV5-37A0A075B6J1 123 aa4.13□□□□□ -1.75
AP000547.3-204ENST00000588548 SPATA8Q6RVD6 105 aa4.13□□□□□ -1.75
AP000547.3-204ENST00000588548 UBR5O95071 2799 aaPredicted RBP4.13□□□□□ -1.75
AP000547.3-204ENST00000588548 ANKRD17O75179 2603 aaKnown RBP4.13□□□□□ -1.75
AP000547.3-204ENST00000588548 MXRA5Q9NR99 2828 aa4.13□□□□□ -1.75
AP000547.3-204ENST00000588548 A0A0J9YWU9 116 aa4.13□□□□□ -1.75
AP000547.3-204ENST00000588548 C1orf137Q5JT78 98 aa4.12□□□□□ -1.75
AP000547.3-204ENST00000588548 A0A1B0GUV1 79 aa4.12□□□□□ -1.75
AP000547.3-204ENST00000588548 HRES1P13985 223 aa4.12□□□□□ -1.75
AP000547.3-204ENST00000588548 REG3AQ06141 175 aa4.12□□□□□ -1.75
AP000547.3-204ENST00000588548 UNQ6190/PRO20217Q6UXQ8 127 aa4.12□□□□□ -1.75
AP000547.3-204ENST00000588548 WFDC10BQ8IUB3 73 aa4.12□□□□□ -1.75
AP000547.3-204ENST00000588548 MAPK1IP1LQ8NDC0 245 aa4.12□□□□□ -1.75
AP000547.3-204ENST00000588548 A6NDX4 124 aa4.11□□□□□ -1.75
AP000547.3-204ENST00000588548 C7orf33Q8WU49 177 aa4.11□□□□□ -1.75
AP000547.3-204ENST00000588548 ABCA12Q86UK0 2595 aa4.11□□□□□ -1.75
AP000547.3-204ENST00000588548 C10orf99Q6UWK7 81 aa4.11□□□□□ -1.75
AP000547.3-204ENST00000588548 NOTCH2NLQ7Z3S9 236 aa4.11□□□□□ -1.75
AP000547.3-204ENST00000588548 H3BUX3 64 aa4.1□□□□□ -1.75
AP000547.3-204ENST00000588548 J3QKU1 62 aa4.1□□□□□ -1.75
AP000547.3-204ENST00000588548 LCE2AQ5TA79 106 aaPredicted RBP4.1□□□□□ -1.75
AP000547.3-204ENST00000588548 CCL19Q99731 98 aa4.1□□□□□ -1.75
AP000547.3-204ENST00000588548 CLPSL2Q6UWE3 100 aa4.1□□□□□ -1.75
AP000547.3-204ENST00000588548 DEFB105AQ8NG35 78 aa4.1□□□□□ -1.75
AP000547.3-204ENST00000588548 ITPR2Q14571 2701 aa4.09□□□□□ -1.75
AP000547.3-204ENST00000588548 REG3GQ6UW15 175 aa4.09□□□□□ -1.75
AP000547.3-204ENST00000588548 TEX15Q9BXT5 2789 aa4.09□□□□□ -1.76
AP000547.3-204ENST00000588548 GVQW2A0A096LPI5 108 aaPredicted RBP4.09□□□□□ -1.76
AP000547.3-204ENST00000588548 CHCHD10Q8WYQ3 142 aaPredicted RBP4.09□□□□□ -1.76
AP000547.3-204ENST00000588548 AKAP9Q99996 3911 aa4.08□□□□□ -1.76
AP000547.3-204ENST00000588548 NAV2Q8IVL1 2488 aa4.08□□□□□ -1.76
AP000547.3-204ENST00000588548 CYSRT1A8MQ03 144 aa4.07□□□□□ -1.76
AP000547.3-204ENST00000588548 MIR22HGQ0VDD5 57 aa4.07□□□□□ -1.76
AP000547.3-204ENST00000588548 XAGE1AQ9HD64 81 aa4.07□□□□□ -1.76
AP000547.3-204ENST00000588548 MSMBP08118 114 aa4.07□□□□□ -1.76
AP000547.3-204ENST00000588548 KRTAP10-9P60411 292 aa4.07□□□□□ -1.76
AP000547.3-204ENST00000588548 PCOTHQ58A44 107 aa4.07□□□□□ -1.76
AP000547.3-204ENST00000588548 TLN2Q9Y4G6 2542 aa4.07□□□□□ -1.76
AP000547.3-204ENST00000588548 P0C880 135 aa4.06□□□□□ -1.76
AP000547.3-204ENST00000588548 MAP6D1Q9H9H5 199 aa4.06□□□□□ -1.76
AP000547.3-204ENST00000588548 NOP10Q9NPE3 64 aaKnown RBP4.06□□□□□ -1.76
AP000547.3-204ENST00000588548 CCDC168Q8NDH2 2452 aa4.06□□□□□ -1.76
AP000547.3-204ENST00000588548 ZNF861PO60384 105 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms