RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 IGKV2D-28P01615 120 aa6.54□□□□□ -1.36
LINC01539-201ENST00000587904 KPRPQ5T749 579 aaPredicted RBP6.54□□□□□ -1.36
LINC01539-201ENST00000587904 C11orf45Q8TAV5 145 aa6.54□□□□□ -1.36
LINC01539-201ENST00000587904 Q8N3U1 123 aa6.53□□□□□ -1.36
LINC01539-201ENST00000587904 COX7B2Q8TF08 81 aa6.53□□□□□ -1.36
LINC01539-201ENST00000587904 SND1-IT1Q9HBX3 110 aa6.53□□□□□ -1.36
LINC01539-201ENST00000587904 Q6ZQT0 140 aa6.52□□□□□ -1.37
LINC01539-201ENST00000587904 PHF5AQ7RTV0 110 aaKnown RBP6.52□□□□□ -1.37
LINC01539-201ENST00000587904 A0A0J9YWU9 116 aa6.51□□□□□ -1.37
LINC01539-201ENST00000587904 ANGP03950 147 aaKnown RBP6.51□□□□□ -1.37
LINC01539-201ENST00000587904 PDE6GP18545 87 aa6.51□□□□□ -1.37
LINC01539-201ENST00000587904 CD164L2Q6UWJ8 174 aa6.51□□□□□ -1.37
LINC01539-201ENST00000587904 SLPIP03973 132 aa6.51□□□□□ -1.37
LINC01539-201ENST00000587904 REG3AQ06141 175 aa6.51□□□□□ -1.37
LINC01539-201ENST00000587904 LINC00269Q8N2A0 174 aa6.51□□□□□ -1.37
LINC01539-201ENST00000587904 HAMPP81172 84 aa6.5□□□□□ -1.37
LINC01539-201ENST00000587904 Q8IZM0 81 aa6.5□□□□□ -1.37
LINC01539-201ENST00000587904 NOTCH1P46531 2555 aa6.5□□□□□ -1.37
LINC01539-201ENST00000587904 TRAV22A0A0B4J277 110 aa6.49□□□□□ -1.37
LINC01539-201ENST00000587904 K7EIL1 84 aa6.49□□□□□ -1.37
LINC01539-201ENST00000587904 BPY2O14599 106 aa6.49□□□□□ -1.37
LINC01539-201ENST00000587904 SYCNQ0VAF6 134 aa6.49□□□□□ -1.37
LINC01539-201ENST00000587904 PRR34Q9NV39 138 aa6.49□□□□□ -1.37
LINC01539-201ENST00000587904 TOMM7Q9P0U1 55 aa6.49□□□□□ -1.37
LINC01539-201ENST00000587904 DEFB131BA0A096LNP1 70 aa6.48□□□□□ -1.37
LINC01539-201ENST00000587904 UBE2AP49459 152 aa6.48□□□□□ -1.37
LINC01539-201ENST00000587904 CLPSL2Q6UWE3 100 aa6.48□□□□□ -1.37
LINC01539-201ENST00000587904 Q8N814 137 aa6.48□□□□□ -1.37
LINC01539-201ENST00000587904 CHCHD10Q8WYQ3 142 aaPredicted RBP6.48□□□□□ -1.37
LINC01539-201ENST00000587904 ZNF73O43830 326 aaPredicted RBP6.48□□□□□ -1.37
LINC01539-201ENST00000587904 NANOS2P60321 138 aaKnown RBP6.48□□□□□ -1.37
LINC01539-201ENST00000587904 ATP11AUNQ6ZP68 121 aa6.47□□□□□ -1.37
LINC01539-201ENST00000587904 TENM3Q9P273 2699 aa6.47□□□□□ -1.37
LINC01539-201ENST00000587904 C8orf87E5RJ46 101 aa6.46□□□□□ -1.37
LINC01539-201ENST00000587904 H3BQ85 93 aa6.46□□□□□ -1.37
LINC01539-201ENST00000587904 OCR1Q9BZK8 76 aa6.46□□□□□ -1.37
LINC01539-201ENST00000587904 H3BS24 57 aa6.45□□□□□ -1.38
LINC01539-201ENST00000587904 PSPHP1O15172 72 aa6.45□□□□□ -1.38
LINC01539-201ENST00000587904 CCL18P55774 89 aa6.45□□□□□ -1.38
LINC01539-201ENST00000587904 KLK12Q9UKR0 248 aa6.45□□□□□ -1.38
LINC01539-201ENST00000587904 PRB2P02812 416 aaPredicted RBP6.45□□□□□ -1.38
LINC01539-201ENST00000587904 C1orf64Q8NEQ6 169 aa6.45□□□□□ -1.38
LINC01539-201ENST00000587904 CYP4F30PQ9H0H9 118 aa6.45□□□□□ -1.38
LINC01539-201ENST00000587904 MGAM2Q2M2H8 2515 aa6.44□□□□□ -1.38
LINC01539-201ENST00000587904 MEGF8Q7Z7M0 2845 aa6.43□□□□□ -1.38
LINC01539-201ENST00000587904 IGLV10-54A0A075B6I4 117 aa6.43□□□□□ -1.38
LINC01539-201ENST00000587904 A6NN06 94 aa6.43□□□□□ -1.38
LINC01539-201ENST00000587904 J3QL48 77 aa6.43□□□□□ -1.38
LINC01539-201ENST00000587904 LINC00158P58513 81 aa6.43□□□□□ -1.38
LINC01539-201ENST00000587904 COX17Q14061 63 aa6.43□□□□□ -1.38
LINC01539-201ENST00000587904 WFDC10BQ8IUB3 73 aa6.43□□□□□ -1.38
LINC01539-201ENST00000587904 LINC00528Q8N1L1 170 aa6.43□□□□□ -1.38
LINC01539-201ENST00000587904 KIAA0087Q14695 138 aa6.43□□□□□ -1.38
LINC01539-201ENST00000587904 LINC01556Q5JQF7 62 aa6.43□□□□□ -1.38
LINC01539-201ENST00000587904 C7orf65Q6ZTY9 151 aa6.43□□□□□ -1.38
LINC01539-201ENST00000587904 LCA10Q71F78 164 aa6.43□□□□□ -1.38
LINC01539-201ENST00000587904 MUC7Q8TAX7 377 aa6.43□□□□□ -1.38
LINC01539-201ENST00000587904 LCE6AA0A183 80 aa6.42□□□□□ -1.38
LINC01539-201ENST00000587904 PSCAO43653 123 aa6.41□□□□□ -1.38
LINC01539-201ENST00000587904 Q5VV11 94 aa6.41□□□□□ -1.38
LINC01539-201ENST00000587904 DIRC1Q969H9 104 aa6.41□□□□□ -1.38
LINC01539-201ENST00000587904 A8MUN3 132 aa6.41□□□□□ -1.38
LINC01539-201ENST00000587904 SPAG11BQ08648 103 aa6.41□□□□□ -1.38
LINC01539-201ENST00000587904 C16orf90A8MZG2 172 aa6.4□□□□□ -1.38
LINC01539-201ENST00000587904 HIGD2AQ9BW72 106 aa6.4□□□□□ -1.38
LINC01539-201ENST00000587904 DNAH10OSP0CZ25 163 aa6.4□□□□□ -1.39
LINC01539-201ENST00000587904 B9D2Q9BPU9 175 aa6.39□□□□□ -1.39
LINC01539-201ENST00000587904 LIMD2Q9BT23 127 aa6.39□□□□□ -1.39
LINC01539-201ENST00000587904 HUWE1Q7Z6Z7 4374 aaKnown RBP6.38□□□□□ -1.39
LINC01539-201ENST00000587904 GVQW2A0A096LPI5 108 aaPredicted RBP6.38□□□□□ -1.39
LINC01539-201ENST00000587904 LRCOL1A6NCL2 159 aa6.37□□□□□ -1.39
LINC01539-201ENST00000587904 M0R2N4 97 aa6.37□□□□□ -1.39
LINC01539-201ENST00000587904 KRTAP26-1Q6PEX3 210 aa6.37□□□□□ -1.39
LINC01539-201ENST00000587904 IGKV4-1P06312 121 aa6.37□□□□□ -1.39
LINC01539-201ENST00000587904 ZCCHC13Q8WW36 166 aaKnown RBP6.37□□□□□ -1.39
LINC01539-201ENST00000587904 HCG22E2RYF7 251 aa6.36□□□□□ -1.39
LINC01539-201ENST00000587904 CHKB-CPT1BH3BT56 60 aa6.35□□□□□ -1.39
LINC01539-201ENST00000587904 LINC00575Q6W349 94 aa6.35□□□□□ -1.39
LINC01539-201ENST00000587904 A8MU10 97 aa6.35□□□□□ -1.39
LINC01539-201ENST00000587904 UNQ6190/PRO20217Q6UXQ8 127 aa6.34□□□□□ -1.39
LINC01539-201ENST00000587904 SPTSSBQ8NFR3 76 aa6.34□□□□□ -1.39
LINC01539-201ENST00000587904 Q75L30 129 aa6.34□□□□□ -1.4
LINC01539-201ENST00000587904 SCXQ7RTU7 201 aa6.34□□□□□ -1.4
LINC01539-201ENST00000587904 IGKV2D-24A0A075B6R9 120 aa6.33□□□□□ -1.4
LINC01539-201ENST00000587904 VPREB1P12018 145 aa6.33□□□□□ -1.4
LINC01539-201ENST00000587904 ELOF1P60002 83 aaKnown RBP6.33□□□□□ -1.4
LINC01539-201ENST00000587904 TNP2Q05952 138 aa6.33□□□□□ -1.4
LINC01539-201ENST00000587904 C10orf25Q5T742 122 aa6.33□□□□□ -1.4
LINC01539-201ENST00000587904 STAB2Q8WWQ8 2551 aa6.33□□□□□ -1.4
LINC01539-201ENST00000587904 C15orf56Q8N910 161 aa6.32□□□□□ -1.4
LINC01539-201ENST00000587904 NKAPP1Q8N9T2 125 aa6.32□□□□□ -1.4
LINC01539-201ENST00000587904 CAMK2N2Q96S95 79 aa6.32□□□□□ -1.4
LINC01539-201ENST00000587904 DNAH9Q9NYC9 4486 aa6.32□□□□□ -1.4
LINC01539-201ENST00000587904 C9orf116Q5BN46 136 aaPredicted RBP6.32□□□□□ -1.4
LINC01539-201ENST00000587904 CDC42SE1Q9NRR8 79 aa6.32□□□□□ -1.4
LINC01539-201ENST00000587904 NDUFB1O75438 58 aa6.31□□□□□ -1.4
LINC01539-201ENST00000587904 C6orf48Q9UBA6 75 aa6.31□□□□□ -1.4
LINC01539-201ENST00000587904 PRR26Q8N8Z3 221 aa6.3□□□□□ -1.4
LINC01539-201ENST00000587904 HIGD2BQ4VC39 106 aa6.3□□□□□ -1.4
LINC01539-201ENST00000587904 Q8N9P0 234 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms