RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 DNAH10OSP0CZ25 163 aa3.11□□□□□ -1.91
ZNF540-204ENST00000586792 UBE2AP49459 152 aa3.11□□□□□ -1.91
ZNF540-204ENST00000586792 LELP1Q5T871 98 aa3.11□□□□□ -1.91
ZNF540-204ENST00000586792 BRK1Q8WUW1 75 aa3.11□□□□□ -1.91
ZNF540-204ENST00000586792 IFI27L1Q96BM0 104 aa3.11□□□□□ -1.91
ZNF540-204ENST00000586792 IGLV1-50A0A075B6I6 118 aa3.1□□□□□ -1.91
ZNF540-204ENST00000586792 TRBV7-3A0A075B6L6 115 aa3.1□□□□□ -1.91
ZNF540-204ENST00000586792 NUPR1O60356 82 aa3.1□□□□□ -1.91
ZNF540-204ENST00000586792 IGHV3-30P01768 117 aa3.1□□□□□ -1.91
ZNF540-204ENST00000586792 IGHV3-33P01772 117 aa3.1□□□□□ -1.91
ZNF540-204ENST00000586792 IGKCP01834 107 aa3.1□□□□□ -1.91
ZNF540-204ENST00000586792 CRPP02741 224 aa3.1□□□□□ -1.91
ZNF540-204ENST00000586792 IGHV3-30-3P0DP02 117 aa3.1□□□□□ -1.91
ZNF540-204ENST00000586792 IGHV3-30-5P0DP03 117 aa3.1□□□□□ -1.91
ZNF540-204ENST00000586792 LINC01556Q5JQF7 62 aa3.1□□□□□ -1.91
ZNF540-204ENST00000586792 LINC00643Q86TS7 51 aa3.1□□□□□ -1.91
ZNF540-204ENST00000586792 C14orf178Q8N769 122 aaPredicted RBP3.1□□□□□ -1.91
ZNF540-204ENST00000586792 CHAC1Q9BUX1 264 aa3.1□□□□□ -1.91
ZNF540-204ENST00000586792 RPP21Q9H633 154 aaKnown RBP3.1□□□□□ -1.91
ZNF540-204ENST00000586792 SND1-IT1Q9HBX3 110 aa3.1□□□□□ -1.91
ZNF540-204ENST00000586792 FAT2Q9NYQ8 4349 aa3.1□□□□□ -1.91
ZNF540-204ENST00000586792 H3BT86 120 aa3.09□□□□□ -1.91
ZNF540-204ENST00000586792 NPYP01303 97 aa3.09□□□□□ -1.91
ZNF540-204ENST00000586792 UBE2BP63146 152 aa3.09□□□□□ -1.91
ZNF540-204ENST00000586792 SERP2Q8N6R1 65 aa3.09□□□□□ -1.91
ZNF540-204ENST00000586792 MUC4Q99102 2169 aa3.09□□□□□ -1.91
ZNF540-204ENST00000586792 DNAH17Q9UFH2 4485 aa3.09□□□□□ -1.92
ZNF540-204ENST00000586792 FRAS1Q86XX4 4008 aa3.09□□□□□ -1.92
ZNF540-204ENST00000586792 TRBV25-1A0A075B6N4 114 aa3.08□□□□□ -1.92
ZNF540-204ENST00000586792 MYMXA0A1B0GTQ4 84 aa3.08□□□□□ -1.92
ZNF540-204ENST00000586792 SMIM27A0A1W2PRY6 76 aa3.08□□□□□ -1.92
ZNF540-204ENST00000586792 C19orf71A6NCJ1 209 aa3.08□□□□□ -1.92
ZNF540-204ENST00000586792 IBA57-AS1B1ANH7 110 aa3.08□□□□□ -1.92
ZNF540-204ENST00000586792 K7ERS5 55 aa3.08□□□□□ -1.92
ZNF540-204ENST00000586792 M0R378 163 aa3.08□□□□□ -1.92
ZNF540-204ENST00000586792 HBDP02042 147 aa3.08□□□□□ -1.92
ZNF540-204ENST00000586792 INAFM2P0DMQ5 153 aa3.08□□□□□ -1.92
ZNF540-204ENST00000586792 UBE2D3P61077 147 aa3.08□□□□□ -1.92
ZNF540-204ENST00000586792 HIST1H4AP62805 103 aaKnown RBP3.08□□□□□ -1.92
ZNF540-204ENST00000586792 UBE2D2P62837 147 aa3.08□□□□□ -1.92
ZNF540-204ENST00000586792 HBBP68871 147 aa3.08□□□□□ -1.92
ZNF540-204ENST00000586792 LYZL1Q6UWQ5 148 aa3.08□□□□□ -1.92
ZNF540-204ENST00000586792 CHCHD7Q9BUK0 85 aa3.08□□□□□ -1.92
ZNF540-204ENST00000586792 DPH3P1Q9H4G8 78 aa3.08□□□□□ -1.92
ZNF540-204ENST00000586792 IGKV2D-24A0A075B6R9 120 aa3.07□□□□□ -1.92
ZNF540-204ENST00000586792 TRBV6-8A0A0A6YYG3 113 aa3.07□□□□□ -1.92
ZNF540-204ENST00000586792 FAM236AA0A1B0GUQ0 79 aa3.07□□□□□ -1.92
ZNF540-204ENST00000586792 FAM236BA0A1B0GV22 79 aa3.07□□□□□ -1.92
ZNF540-204ENST00000586792 LINC01549A6NIU2 74 aa3.07□□□□□ -1.92
ZNF540-204ENST00000586792 UBE2WQ96B02 151 aa3.07□□□□□ -1.92
ZNF540-204ENST00000586792 NAA38Q9BRA0 125 aaKnown RBP3.07□□□□□ -1.92
ZNF540-204ENST00000586792 HECTD4Q9Y4D8 3996 aa3.07□□□□□ -1.92
ZNF540-204ENST00000586792 A0A087WTM6 91 aa3.06□□□□□ -1.92
ZNF540-204ENST00000586792 TRBV27A0A0K0K1C4 114 aa3.06□□□□□ -1.92
ZNF540-204ENST00000586792 TMEM256-PLSCR3K7ERE1 68 aa3.06□□□□□ -1.92
ZNF540-204ENST00000586792 ANGP03950 147 aaKnown RBP3.06□□□□□ -1.92
ZNF540-204ENST00000586792 ATP5EP2Q5VTU8 51 aa3.06□□□□□ -1.92
ZNF540-204ENST00000586792 FAM104BQ5XKR9 115 aa3.06□□□□□ -1.92
ZNF540-204ENST00000586792 SDIM1Q6ZPB5 146 aa3.06□□□□□ -1.92
ZNF540-204ENST00000586792 Q6ZRN7 208 aaPredicted RBP3.06□□□□□ -1.92
ZNF540-204ENST00000586792 PHF5AQ7RTV0 110 aaKnown RBP3.06□□□□□ -1.92
ZNF540-204ENST00000586792 C5orf38Q86SI9 138 aa3.06□□□□□ -1.92
ZNF540-204ENST00000586792 DAND5Q8N907 189 aa3.06□□□□□ -1.92
ZNF540-204ENST00000586792 KLK12Q9UKR0 248 aa3.06□□□□□ -1.92
ZNF540-204ENST00000586792 DNAH11Q96DT5 4516 aa3.05□□□□□ -1.92
ZNF540-204ENST00000586792 PKD1P98161 4303 aa3.05□□□□□ -1.92
ZNF540-204ENST00000586792 A0A1B0GUT8 65 aa3.05□□□□□ -1.92
ZNF540-204ENST00000586792 A8MU10 97 aa3.05□□□□□ -1.92
ZNF540-204ENST00000586792 HIGD1CA8MV81 97 aa3.05□□□□□ -1.92
ZNF540-204ENST00000586792 M0QY20 66 aa3.05□□□□□ -1.92
ZNF540-204ENST00000586792 SLC25A20O43772 301 aa3.05□□□□□ -1.92
ZNF540-204ENST00000586792 MIAQ16674 131 aa3.05□□□□□ -1.92
ZNF540-204ENST00000586792 S100A7L2Q5SY68 101 aa3.05□□□□□ -1.92
ZNF540-204ENST00000586792 Q8N814 137 aa3.05□□□□□ -1.92
ZNF540-204ENST00000586792 CNFNQ9BYD5 112 aa3.05□□□□□ -1.92
ZNF540-204ENST00000586792 XAGE1AQ9HD64 81 aa3.05□□□□□ -1.92
ZNF540-204ENST00000586792 NXT2Q9NPJ8 142 aaKnown RBP3.05□□□□□ -1.92
ZNF540-204ENST00000586792 NHP2Q9NX24 153 aaKnown RBP3.05□□□□□ -1.92
ZNF540-204ENST00000586792 TP73-AS1Q9UF72 201 aa3.05□□□□□ -1.92
ZNF540-204ENST00000586792 KIF25-AS1Q9Y6Z4 181 aa3.05□□□□□ -1.92
ZNF540-204ENST00000586792 BIRC6Q9NR09 4857 aa3.04□□□□□ -1.92
ZNF540-204ENST00000586792 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.04□□□□□ -1.92
ZNF540-204ENST00000586792 A0A087X002 238 aa3.04□□□□□ -1.92
ZNF540-204ENST00000586792 LECT2O14960 151 aa3.04□□□□□ -1.92
ZNF540-204ENST00000586792 PPP1R17O96001 155 aa3.04□□□□□ -1.92
ZNF540-204ENST00000586792 ATXN8Q156A1 80 aa3.04□□□□□ -1.92
ZNF540-204ENST00000586792 LINC01554Q52M75 96 aa3.04□□□□□ -1.92
ZNF540-204ENST00000586792 CLPSL2Q6UWE3 100 aa3.04□□□□□ -1.92
ZNF540-204ENST00000586792 C8orf17Q9NRJ1 99 aa3.04□□□□□ -1.92
ZNF540-204ENST00000586792 V9GYV3 84 aa3.04□□□□□ -1.92
ZNF540-204ENST00000586792 DYNC1H1Q14204 4646 aaKnown RBP3.04□□□□□ -1.92
ZNF540-204ENST00000586792 TRBV10-2A0A0K0K1G8 114 aa3.03□□□□□ -1.92
ZNF540-204ENST00000586792 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
ZNF540-204ENST00000586792 SDHAF1A6NFY7 115 aa3.03□□□□□ -1.92
ZNF540-204ENST00000586792 I3L3M4 83 aa3.03□□□□□ -1.92
ZNF540-204ENST00000586792 BPY2O14599 106 aa3.03□□□□□ -1.92
ZNF540-204ENST00000586792 COX6CP09669 75 aa3.03□□□□□ -1.92
ZNF540-204ENST00000586792 PLNP26678 52 aa3.03□□□□□ -1.92
ZNF540-204ENST00000586792 FCER1GP30273 86 aa3.03□□□□□ -1.92
ZNF540-204ENST00000586792 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms