RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 RPS28P62857 69 aaKnown RBP3.33□□□□□ -1.88
TPM4-203ENST00000586193 RPL39P62891 51 aaKnown RBP3.33□□□□□ -1.88
TPM4-203ENST00000586193 DEFB114Q30KQ6 69 aa3.33□□□□□ -1.88
TPM4-203ENST00000586193 C4orf3Q8WVX3 66 aa3.33□□□□□ -1.88
TPM4-203ENST00000586193 PRO2289Q9P1D8 64 aa3.33□□□□□ -1.88
TPM4-203ENST00000586193 HIGD1BQ9P298 99 aa3.33□□□□□ -1.88
TPM4-203ENST00000586193 HLA-DRB4X5D2U9 266 aa3.33□□□□□ -1.88
TPM4-203ENST00000586193 TRBV25-1A0A075B6N4 114 aa3.32□□□□□ -1.88
TPM4-203ENST00000586193 TRAV2A0A0B4J234 112 aa3.32□□□□□ -1.88
TPM4-203ENST00000586193 H3BRM9 83 aa3.32□□□□□ -1.88
TPM4-203ENST00000586193 J3QQQ9 107 aa3.32□□□□□ -1.88
TPM4-203ENST00000586193 FUSP35637 526 aaKnown RBP eCLIP3.32□□□□□ -1.88
TPM4-203ENST00000586193 TRBV27A0A0K0K1C4 114 aa3.31□□□□□ -1.88
TPM4-203ENST00000586193 K7EIL1 84 aa3.31□□□□□ -1.88
TPM4-203ENST00000586193 SNRPD3P62318 126 aaKnown RBP3.31□□□□□ -1.88
TPM4-203ENST00000586193 SEC11AP67812 179 aa3.31□□□□□ -1.88
TPM4-203ENST00000586193 FAM74A4Q5TZK3 123 aa3.31□□□□□ -1.88
TPM4-203ENST00000586193 WFDC9Q8NEX5 89 aa3.31□□□□□ -1.88
TPM4-203ENST00000586193 AMELXQ99217 191 aa3.31□□□□□ -1.88
TPM4-203ENST00000586193 LINC00467Q9BRT7 94 aa3.31□□□□□ -1.88
TPM4-203ENST00000586193 NOTCH1P46531 2555 aa3.3□□□□□ -1.88
TPM4-203ENST00000586193 A0A1B0GX51 115 aa3.3□□□□□ -1.88
TPM4-203ENST00000586193 H3BUT2 72 aa3.3□□□□□ -1.88
TPM4-203ENST00000586193 FABP2P12104 132 aa3.3□□□□□ -1.88
TPM4-203ENST00000586193 PLNP26678 52 aa3.3□□□□□ -1.88
TPM4-203ENST00000586193 CKS1BP61024 79 aa3.3□□□□□ -1.88
TPM4-203ENST00000586193 RHOHQ15669 191 aa3.3□□□□□ -1.88
TPM4-203ENST00000586193 ZNF56Q15929 161 aa3.3□□□□□ -1.88
TPM4-203ENST00000586193 RAB37Q96AX2 223 aa3.3□□□□□ -1.88
TPM4-203ENST00000586193 CST9LQ9H4G1 147 aa3.3□□□□□ -1.88
TPM4-203ENST00000586193 A0A0G2JQZ4 141 aa3.29□□□□□ -1.88
TPM4-203ENST00000586193 MYMXA0A1B0GTQ4 84 aa3.29□□□□□ -1.88
TPM4-203ENST00000586193 K7EP34 96 aa3.29□□□□□ -1.88
TPM4-203ENST00000586193 TIMM17BO60830 172 aa3.29□□□□□ -1.88
TPM4-203ENST00000586193 PPP1R17O96001 155 aa3.29□□□□□ -1.88
TPM4-203ENST00000586193 CFAP126Q5VTH2 177 aa3.29□□□□□ -1.88
TPM4-203ENST00000586193 Q6ZTI0 123 aa3.29□□□□□ -1.88
TPM4-203ENST00000586193 DYNLRB2Q8TF09 96 aa3.29□□□□□ -1.88
TPM4-203ENST00000586193 TMEM141Q96I45 108 aa3.29□□□□□ -1.88
TPM4-203ENST00000586193 WFDC10AQ9H1F0 79 aa3.29□□□□□ -1.88
TPM4-203ENST00000586193 SPANXCQ9NY87 97 aa3.29□□□□□ -1.88
TPM4-203ENST00000586193 A0A0J9YY99 117 aa3.28□□□□□ -1.88
TPM4-203ENST00000586193 A0A1W2PPM0 123 aa3.28□□□□□ -1.88
TPM4-203ENST00000586193 M0R2P5 195 aa3.28□□□□□ -1.88
TPM4-203ENST00000586193 TIMM21Q9BVV7 248 aa3.28□□□□□ -1.88
TPM4-203ENST00000586193 NHP2Q9NX24 153 aaKnown RBP3.28□□□□□ -1.88
TPM4-203ENST00000586193 ZNF815PA8K554 130 aa3.27□□□□□ -1.89
TPM4-203ENST00000586193 I3L3M4 83 aa3.27□□□□□ -1.89
TPM4-203ENST00000586193 SMIM13P0DJ93 91 aa3.27□□□□□ -1.89
TPM4-203ENST00000586193 HTN1P15515 57 aa3.27□□□□□ -1.89
TPM4-203ENST00000586193 UBE2D1P51668 147 aa3.27□□□□□ -1.89
TPM4-203ENST00000586193 Q6ZUT4 128 aa3.27□□□□□ -1.89
TPM4-203ENST00000586193 DNAH3Q8TD57 4116 aa3.26□□□□□ -1.89
TPM4-203ENST00000586193 COL7A1Q02388 2944 aa3.26□□□□□ -1.89
TPM4-203ENST00000586193 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.26□□□□□ -1.89
TPM4-203ENST00000586193 IGKV2-29A2NJV5 120 aaPredicted RBP3.26□□□□□ -1.89
TPM4-203ENST00000586193 A8MWV9 139 aa3.26□□□□□ -1.89
TPM4-203ENST00000586193 IBA57-AS1B1ANH7 110 aa3.26□□□□□ -1.89
TPM4-203ENST00000586193 IGLV1-51P01701 117 aa3.26□□□□□ -1.89
TPM4-203ENST00000586193 PHF5AQ7RTV0 110 aaKnown RBP3.26□□□□□ -1.89
TPM4-203ENST00000586193 SBSPONQ8IVN8 264 aa3.26□□□□□ -1.89
TPM4-203ENST00000586193 UBE2D4Q9Y2X8 147 aa3.26□□□□□ -1.89
TPM4-203ENST00000586193 SPCS1Q9Y6A9 102 aa3.26□□□□□ -1.89
TPM4-203ENST00000586193 IGHV3-30P01768 117 aa3.25□□□□□ -1.89
TPM4-203ENST00000586193 LINC00694P0DN24 101 aa3.25□□□□□ -1.89
TPM4-203ENST00000586193 IGHV3-30-5P0DP03 117 aa3.25□□□□□ -1.89
TPM4-203ENST00000586193 TPRXLQ17RH7 258 aa3.25□□□□□ -1.89
TPM4-203ENST00000586193 ESRGQ1W209 222 aa3.25□□□□□ -1.89
TPM4-203ENST00000586193 OCIAD2Q56VL3 154 aa3.25□□□□□ -1.89
TPM4-203ENST00000586193 TMEM170BQ5T4T1 132 aa3.25□□□□□ -1.89
TPM4-203ENST00000586193 TRGV1A0A0A0MS02 117 aa3.24□□□□□ -1.89
TPM4-203ENST00000586193 IGHV1-58A0A0C4DH39 117 aa3.24□□□□□ -1.89
TPM4-203ENST00000586193 LOC107984640A0A0U1RRK4 108 aa3.24□□□□□ -1.89
TPM4-203ENST00000586193 LINC01549A6NIU2 74 aa3.24□□□□□ -1.89
TPM4-203ENST00000586193 MRPS36P82909 103 aaKnown RBP3.24□□□□□ -1.89
TPM4-203ENST00000586193 COX6A2Q02221 97 aa3.24□□□□□ -1.89
TPM4-203ENST00000586193 WFDC2Q14508 124 aa3.24□□□□□ -1.89
TPM4-203ENST00000586193 DNAH9Q9NYC9 4486 aa3.23□□□□□ -1.89
TPM4-203ENST00000586193 C9JAW5 83 aa3.23□□□□□ -1.89
TPM4-203ENST00000586193 UBE2D3P61077 147 aa3.23□□□□□ -1.89
TPM4-203ENST00000586193 UBE2D2P62837 147 aa3.23□□□□□ -1.89
TPM4-203ENST00000586193 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
TPM4-203ENST00000586193 GTF2H5Q6ZYL4 71 aa3.23□□□□□ -1.89
TPM4-203ENST00000586193 C9orf163Q8N9P6 203 aa3.23□□□□□ -1.89
TPM4-203ENST00000586193 NOP10Q9NPE3 64 aaKnown RBP3.23□□□□□ -1.89
TPM4-203ENST00000586193 TRGV4A0A0C4DH28 118 aa3.22□□□□□ -1.89
TPM4-203ENST00000586193 SPINK8P0C7L1 97 aa3.22□□□□□ -1.89
TPM4-203ENST00000586193 C7orf65Q6ZTY9 151 aa3.22□□□□□ -1.89
TPM4-203ENST00000586193 MUSTN1Q8IVN3 82 aa3.22□□□□□ -1.89
TPM4-203ENST00000586193 TMEM263Q8WUH6 116 aaKnown RBP3.22□□□□□ -1.89
TPM4-203ENST00000586193 TRBV7-6A0A0J9YX20 115 aa3.21□□□□□ -1.9
TPM4-203ENST00000586193 H3BMG7 143 aa3.21□□□□□ -1.9
TPM4-203ENST00000586193 IGHV3-33P01772 117 aa3.21□□□□□ -1.9
TPM4-203ENST00000586193 SFTA2Q6UW10 78 aa3.21□□□□□ -1.9
TPM4-203ENST00000586193 BRK1Q8WUW1 75 aa3.21□□□□□ -1.9
TPM4-203ENST00000586193 RETNLBQ9BQ08 111 aa3.21□□□□□ -1.9
TPM4-203ENST00000586193 CDKN2A-AS1Q9UH64 79 aa3.21□□□□□ -1.9
TPM4-203ENST00000586193 KMT2CQ8NEZ4 4911 aaKnown RBP3.21□□□□□ -1.9
TPM4-203ENST00000586193 TRAV13-1A0A0B4J241 112 aa3.2□□□□□ -1.9
TPM4-203ENST00000586193 TRBV10-1A0A0K0K1A3 114 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms