RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 PYY3Q5JQD4 70 aa14.03□□□□□ -0.16
LSM7-202ENST00000585395 EIF4EBP3O60516 100 aaPredicted RBP14.02□□□□□ -0.17
LSM7-202ENST00000585395 SLC25A34Q6PIV7 304 aa14.01□□□□□ -0.17
LSM7-202ENST00000585395 MUSTN1Q8IVN3 82 aa14.01□□□□□ -0.17
LSM7-202ENST00000585395 OR13C6PQ8NH95 151 aa14.01□□□□□ -0.17
LSM7-202ENST00000585395 ETDCA0A1B0GVM5 59 aa14□□□□□ -0.17
LSM7-202ENST00000585395 IGLV6-57P01721 117 aa14□□□□□ -0.17
LSM7-202ENST00000585395 LINC00337Q8N6G1 96 aa14□□□□□ -0.17
LSM7-202ENST00000585395 C14orf144Q96I85 54 aa13.99□□□□□ -0.17
LSM7-202ENST00000585395 TRAV23DV6A0A075B6W5 121 aa13.97□□□□□ -0.17
LSM7-202ENST00000585395 SPRR1AP35321 89 aa13.96□□□□□ -0.17
LSM7-202ENST00000585395 HINT1P49773 126 aaPredicted RBP13.96□□□□□ -0.17
LSM7-202ENST00000585395 HIST1H4GQ99525 98 aa13.96□□□□□ -0.17
LSM7-202ENST00000585395 PRLHP81277 87 aa13.95□□□□□ -0.18
LSM7-202ENST00000585395 KRTAP13-1Q8IUC0 172 aa13.95□□□□□ -0.18
LSM7-202ENST00000585395 HIGD1BQ9P298 99 aa13.95□□□□□ -0.18
LSM7-202ENST00000585395 TRAV13-2A0A0B4J235 113 aa13.92□□□□□ -0.18
LSM7-202ENST00000585395 A6NDN8 102 aa13.91□□□□□ -0.18
LSM7-202ENST00000585395 ZNF73O43830 326 aaPredicted RBP13.91□□□□□ -0.18
LSM7-202ENST00000585395 KRTAP10-8P60410 259 aa13.9□□□□□ -0.18
LSM7-202ENST00000585395 HIGD2AQ9BW72 106 aa13.9□□□□□ -0.18
LSM7-202ENST00000585395 KRTAP4-16G5E9R7 235 aaPredicted RBP13.88□□□□□ -0.19
LSM7-202ENST00000585395 ZNF706Q9Y5V0 76 aaPredicted RBP13.87□□□□□ -0.19
LSM7-202ENST00000585395 A4D1N5 150 aa13.86□□□□□ -0.19
LSM7-202ENST00000585395 B5MCH6 92 aa13.86□□□□□ -0.19
LSM7-202ENST00000585395 TAL2Q16559 108 aa13.86□□□□□ -0.19
LSM7-202ENST00000585395 PRR26Q8N8Z3 221 aa13.86□□□□□ -0.19
LSM7-202ENST00000585395 Q6ZRX8 168 aa13.85□□□□□ -0.19
LSM7-202ENST00000585395 RPL13AP40429 203 aaKnown RBP13.84□□□□□ -0.19
LSM7-202ENST00000585395 UQCR10Q9UDW1 63 aa13.83□□□□□ -0.2
LSM7-202ENST00000585395 SMIM6P0DI80 62 aa13.82□□□□□ -0.2
LSM7-202ENST00000585395 C2orf91Q6ZV80 131 aa13.82□□□□□ -0.2
LSM7-202ENST00000585395 KRTAP1-4P0C5Y4 121 aa13.81□□□□□ -0.2
LSM7-202ENST00000585395 TMEM238LA0A1B0GVL6 79 aa13.8□□□□□ -0.2
LSM7-202ENST00000585395 A6NJY4 79 aa13.8□□□□□ -0.2
LSM7-202ENST00000585395 SMCR5Q8TEV8 140 aa13.8□□□□□ -0.2
LSM7-202ENST00000585395 TRBV7-6A0A0J9YX20 115 aa13.79□□□□□ -0.2
LSM7-202ENST00000585395 C6orf99Q4VX62 202 aa13.79□□□□□ -0.2
LSM7-202ENST00000585395 CRYGAP11844 174 aa13.78□□□□□ -0.2
LSM7-202ENST00000585395 COX7BP24311 80 aa13.78□□□□□ -0.2
LSM7-202ENST00000585395 FAM229BQ4G0N7 80 aa13.78□□□□□ -0.2
LSM7-202ENST00000585395 DHRS4-AS1Q9P1J3 65 aa13.77□□□□□ -0.21
LSM7-202ENST00000585395 CEND1Q8N111 149 aa13.76□□□□□ -0.21
LSM7-202ENST00000585395 RAB37Q96AX2 223 aa13.76□□□□□ -0.21
LSM7-202ENST00000585395 A0A1B0GWB2 263 aa13.75□□□□□ -0.21
LSM7-202ENST00000585395 HSD52Q0P140 79 aa13.75□□□□□ -0.21
LSM7-202ENST00000585395 VAMP3Q15836 100 aa13.75□□□□□ -0.21
LSM7-202ENST00000585395 ELOF1P60002 83 aaKnown RBP13.74□□□□□ -0.21
LSM7-202ENST00000585395 SPRR4Q96PI1 79 aa13.74□□□□□ -0.21
LSM7-202ENST00000585395 C12orf57Q99622 126 aa13.73□□□□□ -0.21
LSM7-202ENST00000585395 SMIM11BQ8TCY0 68 aa13.72□□□□□ -0.21
LSM7-202ENST00000585395 Q9BRP9 147 aa13.72□□□□□ -0.21
LSM7-202ENST00000585395 A0A0B4J2C4 111 aa13.71□□□□□ -0.21
LSM7-202ENST00000585395 NHP2Q9NX24 153 aaKnown RBP13.71□□□□□ -0.21
LSM7-202ENST00000585395 LOC105371267A0A1B0GV96 52 aa13.68□□□□□ -0.22
LSM7-202ENST00000585395 CFC1BP0CG36 223 aa13.68□□□□□ -0.22
LSM7-202ENST00000585395 CFC1P0CG37 223 aa13.68□□□□□ -0.22
LSM7-202ENST00000585395 TYMSOSQ8TAI1 123 aa13.68□□□□□ -0.22
LSM7-202ENST00000585395 KRTAP9-2Q9BYQ4 174 aa13.67□□□□□ -0.22
LSM7-202ENST00000585395 SLC25A20O43772 301 aa13.66□□□□□ -0.22
LSM7-202ENST00000585395 ERC2-IT1O76042 136 aa13.66□□□□□ -0.22
LSM7-202ENST00000585395 GAGE2AQ6NT46 116 aa13.66□□□□□ -0.22
LSM7-202ENST00000585395 ANAPC11Q9NYG5 84 aa13.66□□□□□ -0.22
LSM7-202ENST00000585395 A0A087X002 238 aa13.65□□□□□ -0.22
LSM7-202ENST00000585395 BVES-AS1Q5T3Y7 98 aa13.65□□□□□ -0.22
LSM7-202ENST00000585395 LINC00483Q53H64 154 aa13.64□□□□□ -0.23
LSM7-202ENST00000585395 PRO1933Q9H354 126 aa13.64□□□□□ -0.23
LSM7-202ENST00000585395 FXYD2P54710 66 aa13.63□□□□□ -0.23
LSM7-202ENST00000585395 PRO1854Q9UHT4 67 aa13.63□□□□□ -0.23
LSM7-202ENST00000585395 H7C2G1 150 aa13.62□□□□□ -0.23
LSM7-202ENST00000585395 Q1RN00 199 aa13.62□□□□□ -0.23
LSM7-202ENST00000585395 TSTD3H0UI37 97 aa13.61□□□□□ -0.23
LSM7-202ENST00000585395 SNCGO76070 127 aa13.59□□□□□ -0.23
LSM7-202ENST00000585395 KRTAP13-2Q52LG2 175 aa13.57□□□□□ -0.24
LSM7-202ENST00000585395 ST20-AS1Q8NBB2 130 aa13.56□□□□□ -0.24
LSM7-202ENST00000585395 H0YGX0 51 aa13.55□□□□□ -0.24
LSM7-202ENST00000585395 M0R143 59 aa13.55□□□□□ -0.24
LSM7-202ENST00000585395 TSPAN13O95857 204 aa13.55□□□□□ -0.24
LSM7-202ENST00000585395 LPAP08519 4548 aa13.55□□□□□ -0.24
LSM7-202ENST00000585395 SPRR1BP22528 89 aa13.54□□□□□ -0.24
LSM7-202ENST00000585395 LINC00575Q6W349 94 aa13.54□□□□□ -0.24
LSM7-202ENST00000585395 TEX49A0A1B0GTD5 131 aa13.53□□□□□ -0.24
LSM7-202ENST00000585395 hADV29S1A0JD25 119 aa13.53□□□□□ -0.24
LSM7-202ENST00000585395 LAMTOR3Q9UHA4 124 aa13.53□□□□□ -0.24
LSM7-202ENST00000585395 C3orf22Q8N5N4 141 aa13.52□□□□□ -0.25
LSM7-202ENST00000585395 MUC2Q02817 5179 aa13.51□□□□□ -0.25
LSM7-202ENST00000585395 LINC00304Q8N9R0 145 aa13.51□□□□□ -0.25
LSM7-202ENST00000585395 DEFB105AQ8NG35 78 aa13.51□□□□□ -0.25
LSM7-202ENST00000585395 IGLV9-49A0A0B4J1Y8 123 aa13.5□□□□□ -0.25
LSM7-202ENST00000585395 PRR4Q16378 134 aa13.5□□□□□ -0.25
LSM7-202ENST00000585395 C4orf48Q5BLP8 95 aa13.5□□□□□ -0.25
LSM7-202ENST00000585395 SSBP3-AS1Q7Z2R9 100 aa13.5□□□□□ -0.25
LSM7-202ENST00000585395 CTAG1AP78358 180 aa13.49□□□□□ -0.25
LSM7-202ENST00000585395 SPAG11AQ6PDA7 123 aa13.49□□□□□ -0.25
LSM7-202ENST00000585395 C9orf153Q5TBE3 101 aa13.48□□□□□ -0.25
LSM7-202ENST00000585395 IGLV5-48A0A075B6I7 105 aa13.47□□□□□ -0.25
LSM7-202ENST00000585395 COX6CP09669 75 aa13.47□□□□□ -0.25
LSM7-202ENST00000585395 PSMB2P49721 201 aa13.47□□□□□ -0.25
LSM7-202ENST00000585395 MOBPQ13875 183 aa13.47□□□□□ -0.25
LSM7-202ENST00000585395 KRTAP9-6A0A140TA67 174 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms