RNA–Protein interactions for RNA: ENST00000584992.1

RIOK3-211, Transcript of RIO kinase 3, humanhuman

TSL 3

Gene RIOK3, Length 396 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-211ENST00000584992 DOT1LQ8TEK3 1739 aa-0.12□□□□□ -2.43
RIOK3-211ENST00000584992 ACYP1P07311 99 aa-0.12□□□□□ -2.43
RIOK3-211ENST00000584992 GNG2P59768 71 aa-0.12□□□□□ -2.43
RIOK3-211ENST00000584992 DEFB135Q30KP9 77 aa-0.12□□□□□ -2.43
RIOK3-211ENST00000584992 GAFA1Q96PS6 74 aa-0.12□□□□□ -2.43
RIOK3-211ENST00000584992 FLNBO75369 2602 aaKnown RBP-0.12□□□□□ -2.43
RIOK3-211ENST00000584992 DCHS2Q6V1P9 2916 aa-0.12□□□□□ -2.43
RIOK3-211ENST00000584992 NSD1Q96L73 2696 aaPredicted RBP-0.12□□□□□ -2.43
RIOK3-211ENST00000584992 UACAQ9BZF9 1416 aa-0.13□□□□□ -2.43
RIOK3-211ENST00000584992 NESP48681 1621 aa-0.13□□□□□ -2.43
RIOK3-211ENST00000584992 ACANP16112 2415 aa-0.13□□□□□ -2.43
RIOK3-211ENST00000584992 DSTQ03001 7570 aaKnown RBP-0.13□□□□□ -2.43
RIOK3-211ENST00000584992 ZANQ9Y493 2812 aa-0.13□□□□□ -2.43
RIOK3-211ENST00000584992 CNOT1A5YKK6 2376 aaKnown RBP-0.13□□□□□ -2.43
RIOK3-211ENST00000584992 NWD1Q149M9 1564 aa-0.13□□□□□ -2.43
RIOK3-211ENST00000584992 CEBPZOSA8MTT3 80 aa-0.13□□□□□ -2.43
RIOK3-211ENST00000584992 LELP1Q5T871 98 aa-0.13□□□□□ -2.43
RIOK3-211ENST00000584992 COX6B2Q6YFQ2 88 aa-0.13□□□□□ -2.43
RIOK3-211ENST00000584992 WFDC13Q8IUB5 93 aa-0.13□□□□□ -2.43
RIOK3-211ENST00000584992 LRP2P98164 4655 aa-0.13□□□□□ -2.43
RIOK3-211ENST00000584992 ARFGEF2Q9Y6D5 1785 aa-0.14□□□□□ -2.43
RIOK3-211ENST00000584992 ZNF831Q5JPB2 1677 aa-0.14□□□□□ -2.43
RIOK3-211ENST00000584992 KNL1Q8NG31 2342 aa-0.14□□□□□ -2.43
RIOK3-211ENST00000584992 HECTD4Q9Y4D8 3996 aa-0.14□□□□□ -2.43
RIOK3-211ENST00000584992 TRAV21A0A0B4J279 112 aa-0.14□□□□□ -2.43
RIOK3-211ENST00000584992 NDUFB1O75438 58 aa-0.14□□□□□ -2.43
RIOK3-211ENST00000584992 PIK3C2BO00750 1634 aa-0.14□□□□□ -2.43
RIOK3-211ENST00000584992 USP32Q8NFA0 1604 aa-0.14□□□□□ -2.43
RIOK3-211ENST00000584992 CICQ96RK0 1608 aaPredicted RBP-0.14□□□□□ -2.43
RIOK3-211ENST00000584992 PTPN23Q9H3S7 1636 aa-0.14□□□□□ -2.43
RIOK3-211ENST00000584992 URB2Q14146 1524 aaKnown RBP-0.14□□□□□ -2.43
RIOK3-211ENST00000584992 MAGI3Q5TCQ9 1506 aa-0.14□□□□□ -2.43
RIOK3-211ENST00000584992 PCNX1Q96RV3 2341 aa-0.14□□□□□ -2.43
RIOK3-211ENST00000584992 SCN11AQ9UI33 1791 aa-0.14□□□□□ -2.43
RIOK3-211ENST00000584992 ADAMTS12P58397 1594 aa-0.15□□□□□ -2.43
RIOK3-211ENST00000584992 MED14O60244 1454 aa-0.15□□□□□ -2.43
RIOK3-211ENST00000584992 SETXQ7Z333 2677 aaKnown RBP-0.15□□□□□ -2.43
RIOK3-211ENST00000584992 STAB1Q9NY15 2570 aa-0.15□□□□□ -2.43
RIOK3-211ENST00000584992 KANTRA0A1W2PQU2 76 aa-0.15□□□□□ -2.43
RIOK3-211ENST00000584992 KRTAP6-1Q3LI64 71 aa-0.15□□□□□ -2.43
RIOK3-211ENST00000584992 WFDC9Q8NEX5 89 aa-0.15□□□□□ -2.43
RIOK3-211ENST00000584992 TDRG1Q3Y452 100 aa-0.16□□□□□ -2.44
RIOK3-211ENST00000584992 NCOA2Q15596 1464 aa-0.16□□□□□ -2.44
RIOK3-211ENST00000584992 CFAP43Q8NDM7 1665 aa-0.17□□□□□ -2.44
RIOK3-211ENST00000584992 NDUFA3O95167 84 aa-0.17□□□□□ -2.44
RIOK3-211ENST00000584992 DDX60LQ5H9U9 1706 aaKnown RBP-0.17□□□□□ -2.44
RIOK3-211ENST00000584992 DIP2BQ9P265 1576 aa-0.17□□□□□ -2.44
RIOK3-211ENST00000584992 COL6A3P12111 3177 aa-0.17□□□□□ -2.44
RIOK3-211ENST00000584992 CCDC88BA6NC98 1476 aa-0.17□□□□□ -2.44
RIOK3-211ENST00000584992 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.18□□□□□ -2.44
RIOK3-211ENST00000584992 TENM2Q9NT68 2774 aa-0.18□□□□□ -2.44
RIOK3-211ENST00000584992 MUC12Q9UKN1 5478 aa-0.18□□□□□ -2.44
RIOK3-211ENST00000584992 PLCH1Q4KWH8 1693 aa-0.18□□□□□ -2.44
RIOK3-211ENST00000584992 DCAF1Q9Y4B6 1507 aa-0.18□□□□□ -2.44
RIOK3-211ENST00000584992 PDE4DIPQ5VU43 2346 aa-0.19□□□□□ -2.44
RIOK3-211ENST00000584992 SPRR2AP35326 72 aa-0.19□□□□□ -2.44
RIOK3-211ENST00000584992 ST20Q9HBF5 79 aa-0.19□□□□□ -2.44
RIOK3-211ENST00000584992 CCDC18Q5T9S5 1454 aa-0.19□□□□□ -2.44
RIOK3-211ENST00000584992 WIZO95785 1651 aa-0.19□□□□□ -2.44
RIOK3-211ENST00000584992 PLXNC1O60486 1568 aa-0.19□□□□□ -2.44
RIOK3-211ENST00000584992 LRP1BQ9NZR2 4599 aa-0.2□□□□□ -2.44
RIOK3-211ENST00000584992 NBASA2RRP1 2371 aa-0.2□□□□□ -2.44
RIOK3-211ENST00000584992 H0YGG7 62 aa-0.2□□□□□ -2.44
RIOK3-211ENST00000584992 C3orf79P0CE67 100 aa-0.2□□□□□ -2.44
RIOK3-211ENST00000584992 ADIRFQ15847 76 aa-0.2□□□□□ -2.44
RIOK3-211ENST00000584992 ATP5EP2Q5VTU8 51 aa-0.2□□□□□ -2.44
RIOK3-211ENST00000584992 S100A13Q99584 98 aa-0.2□□□□□ -2.44
RIOK3-211ENST00000584992 SRRM2Q9UQ35 2752 aaKnown RBP-0.21□□□□□ -2.44
RIOK3-211ENST00000584992 ABCC1P33527 1531 aa-0.21□□□□□ -2.44
RIOK3-211ENST00000584992 KDM5DQ9BY66 1539 aa-0.21□□□□□ -2.44
RIOK3-211ENST00000584992 LCE6AA0A183 80 aa-0.21□□□□□ -2.44
RIOK3-211ENST00000584992 UMAD1C9J7I0 102 aa-0.21□□□□□ -2.44
RIOK3-211ENST00000584992 IFI27P40305 119 aaPredicted RBP-0.21□□□□□ -2.44
RIOK3-211ENST00000584992 KRTAP6-2Q3LI66 62 aa-0.21□□□□□ -2.44
RIOK3-211ENST00000584992 DEFB121Q5J5C9 76 aa-0.21□□□□□ -2.44
RIOK3-211ENST00000584992 PRO3102Q9H379 93 aa-0.21□□□□□ -2.44
RIOK3-211ENST00000584992 CFAP74Q9C0B2 1584 aa-0.21□□□□□ -2.44
RIOK3-211ENST00000584992 DEPDC5O75140 1603 aa-0.21□□□□□ -2.44
RIOK3-211ENST00000584992 ITSN1Q15811 1721 aa-0.21□□□□□ -2.44
RIOK3-211ENST00000584992 ERVK-7P63135 1459 aa-0.22□□□□□ -2.44
RIOK3-211ENST00000584992 IFI6P09912 130 aa-0.22□□□□□ -2.44
RIOK3-211ENST00000584992 RICTORQ6R327 1708 aa-0.22□□□□□ -2.44
RIOK3-211ENST00000584992 ARHGAP35Q9NRY4 1499 aa-0.22□□□□□ -2.45
RIOK3-211ENST00000584992 REV3LO60673 3130 aa-0.23□□□□□ -2.45
RIOK3-211ENST00000584992 TJP1Q07157 1748 aa-0.23□□□□□ -2.45
RIOK3-211ENST00000584992 HMGA1P17096 107 aaKnown RBP-0.23□□□□□ -2.45
RIOK3-211ENST00000584992 LINC00158P58513 81 aa-0.23□□□□□ -2.45
RIOK3-211ENST00000584992 KRTAP19-7Q3SYF9 63 aa-0.23□□□□□ -2.45
RIOK3-211ENST00000584992 PKHD1P08F94 4074 aa-0.23□□□□□ -2.45
RIOK3-211ENST00000584992 STAB2Q8WWQ8 2551 aa-0.23□□□□□ -2.45
RIOK3-211ENST00000584992 SETD2Q9BYW2 2564 aaPredicted RBP-0.23□□□□□ -2.45
RIOK3-211ENST00000584992 THOC2Q8NI27 1593 aaKnown RBP-0.23□□□□□ -2.45
RIOK3-211ENST00000584992 FLGP20930 4061 aaPredicted RBP-0.24□□□□□ -2.45
RIOK3-211ENST00000584992 MUC2Q02817 5179 aa-0.24□□□□□ -2.45
RIOK3-211ENST00000584992 H3BUT2 72 aa-0.24□□□□□ -2.45
RIOK3-211ENST00000584992 SPRR2EP22531 72 aa-0.24□□□□□ -2.45
RIOK3-211ENST00000584992 NREPQ16612 68 aa-0.24□□□□□ -2.45
RIOK3-211ENST00000584992 SPTBN4Q9H254 2564 aa-0.24□□□□□ -2.45
RIOK3-211ENST00000584992 MAP1AP78559 2803 aaPredicted RBP-0.24□□□□□ -2.45
RIOK3-211ENST00000584992 SVEP1Q4LDE5 3571 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms