RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 HNRNPA3P51991 378 aaKnown RBP5.72□□□□□ -1.49
UBBP4-201ENST00000583708 A0A0B4J2C4 111 aa5.71□□□□□ -1.5
UBBP4-201ENST00000583708 ETDCA0A1B0GVM5 59 aa5.71□□□□□ -1.5
UBBP4-201ENST00000583708 A6NDN8 102 aa5.71□□□□□ -1.5
UBBP4-201ENST00000583708 ZNF73O43830 326 aaPredicted RBP5.71□□□□□ -1.5
UBBP4-201ENST00000583708 INAFM2P0DMQ5 153 aa5.71□□□□□ -1.5
UBBP4-201ENST00000583708 UBE2AP49459 152 aa5.71□□□□□ -1.5
UBBP4-201ENST00000583708 KRTAP11-1Q8IUC1 163 aa5.71□□□□□ -1.5
UBBP4-201ENST00000583708 KRTAP4-16G5E9R7 235 aaPredicted RBP5.7□□□□□ -1.5
UBBP4-201ENST00000583708 VAMP3Q15836 100 aa5.7□□□□□ -1.5
UBBP4-201ENST00000583708 KRTAP13-1Q8IUC0 172 aa5.7□□□□□ -1.5
UBBP4-201ENST00000583708 M0R143 59 aa5.69□□□□□ -1.5
UBBP4-201ENST00000583708 FAM19A1Q7Z5A9 133 aa5.69□□□□□ -1.5
UBBP4-201ENST00000583708 RAB37Q96AX2 223 aa5.69□□□□□ -1.5
UBBP4-201ENST00000583708 A0A1B0GWB2 263 aa5.68□□□□□ -1.5
UBBP4-201ENST00000583708 B5MCH6 92 aa5.68□□□□□ -1.5
UBBP4-201ENST00000583708 OXTP01178 125 aa5.68□□□□□ -1.5
UBBP4-201ENST00000583708 CFC1BP0CG36 223 aa5.68□□□□□ -1.5
UBBP4-201ENST00000583708 CFC1P0CG37 223 aa5.68□□□□□ -1.5
UBBP4-201ENST00000583708 DHRS4-AS1Q9P1J3 65 aa5.68□□□□□ -1.5
UBBP4-201ENST00000583708 SNCGO76070 127 aa5.67□□□□□ -1.5
UBBP4-201ENST00000583708 Q6ZRX8 168 aa5.67□□□□□ -1.5
UBBP4-201ENST00000583708 KRTAP17-1Q9BYP8 105 aa5.67□□□□□ -1.5
UBBP4-201ENST00000583708 PRO1933Q9H354 126 aa5.67□□□□□ -1.5
UBBP4-201ENST00000583708 NHP2Q9NX24 153 aaKnown RBP5.67□□□□□ -1.5
UBBP4-201ENST00000583708 PRO1854Q9UHT4 67 aa5.67□□□□□ -1.5
UBBP4-201ENST00000583708 ZNF706Q9Y5V0 76 aaPredicted RBP5.67□□□□□ -1.5
UBBP4-201ENST00000583708 COX7BP24311 80 aa5.66□□□□□ -1.5
UBBP4-201ENST00000583708 BVES-AS1Q5T3Y7 98 aa5.66□□□□□ -1.5
UBBP4-201ENST00000583708 PKHD1L1Q86WI1 4243 aa5.66□□□□□ -1.5
UBBP4-201ENST00000583708 H0YGX0 51 aa5.65□□□□□ -1.5
UBBP4-201ENST00000583708 RPL13AP40429 203 aaKnown RBP5.65□□□□□ -1.5
UBBP4-201ENST00000583708 FXYD2P54710 66 aa5.65□□□□□ -1.5
UBBP4-201ENST00000583708 ELOF1P60002 83 aaKnown RBP5.65□□□□□ -1.5
UBBP4-201ENST00000583708 C6orf99Q4VX62 202 aa5.65□□□□□ -1.5
UBBP4-201ENST00000583708 SMIM11BQ8TCY0 68 aa5.65□□□□□ -1.5
UBBP4-201ENST00000583708 SLC25A20O43772 301 aa5.64□□□□□ -1.51
UBBP4-201ENST00000583708 CTAG1AP78358 180 aa5.64□□□□□ -1.51
UBBP4-201ENST00000583708 FAM229BQ4G0N7 80 aa5.64□□□□□ -1.51
UBBP4-201ENST00000583708 KRTAP4-5Q9BYR2 181 aa5.64□□□□□ -1.51
UBBP4-201ENST00000583708 KRTAP29-1A8MX34 341 aaPredicted RBP5.63□□□□□ -1.51
UBBP4-201ENST00000583708 PRLHP81277 87 aa5.63□□□□□ -1.51
UBBP4-201ENST00000583708 SMCR5Q8TEV8 140 aa5.63□□□□□ -1.51
UBBP4-201ENST00000583708 HIGD2AQ9BW72 106 aa5.63□□□□□ -1.51
UBBP4-201ENST00000583708 A0A1B0GX51 115 aa5.62□□□□□ -1.51
UBBP4-201ENST00000583708 GHRHP01286 108 aa5.62□□□□□ -1.51
UBBP4-201ENST00000583708 COX6CP09669 75 aa5.62□□□□□ -1.51
UBBP4-201ENST00000583708 LINC01600Q96MT4 127 aa5.62□□□□□ -1.51
UBBP4-201ENST00000583708 LCE2DQ5TA82 110 aaPredicted RBP5.61□□□□□ -1.51
UBBP4-201ENST00000583708 Q9BRP9 147 aa5.61□□□□□ -1.51
UBBP4-201ENST00000583708 Q1RN00 199 aa5.6□□□□□ -1.51
UBBP4-201ENST00000583708 LINC00575Q6W349 94 aa5.6□□□□□ -1.51
UBBP4-201ENST00000583708 SPRR4Q96PI1 79 aa5.6□□□□□ -1.51
UBBP4-201ENST00000583708 FLG2Q5D862 2391 aaPredicted RBP5.59□□□□□ -1.51
UBBP4-201ENST00000583708 H3BQ85 93 aa5.59□□□□□ -1.51
UBBP4-201ENST00000583708 KRTAP1-4P0C5Y4 121 aa5.59□□□□□ -1.51
UBBP4-201ENST00000583708 CRYGAP11844 174 aa5.59□□□□□ -1.51
UBBP4-201ENST00000583708 LINC00483Q53H64 154 aa5.59□□□□□ -1.51
UBBP4-201ENST00000583708 OCIAD2Q56VL3 154 aa5.59□□□□□ -1.51
UBBP4-201ENST00000583708 PPDPFLQ8WWR9 84 aa5.59□□□□□ -1.51
UBBP4-201ENST00000583708 hADV29S1A0JD25 119 aa5.58□□□□□ -1.52
UBBP4-201ENST00000583708 H7C2G1 150 aa5.58□□□□□ -1.52
UBBP4-201ENST00000583708 SPRR1BP22528 89 aa5.58□□□□□ -1.52
UBBP4-201ENST00000583708 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.58□□□□□ -1.52
UBBP4-201ENST00000583708 PSMB2P49721 201 aa5.57□□□□□ -1.52
UBBP4-201ENST00000583708 KRTAP10-8P60410 259 aa5.57□□□□□ -1.52
UBBP4-201ENST00000583708 IGLV5-48A0A075B6I7 105 aa5.56□□□□□ -1.52
UBBP4-201ENST00000583708 TEX49A0A1B0GTD5 131 aa5.56□□□□□ -1.52
UBBP4-201ENST00000583708 LYRM7Q5U5X0 104 aa5.56□□□□□ -1.52
UBBP4-201ENST00000583708 ABCA13Q86UQ4 5058 aa5.55□□□□□ -1.52
UBBP4-201ENST00000583708 J3QL48 77 aa5.55□□□□□ -1.52
UBBP4-201ENST00000583708 ERC2-IT1O76042 136 aa5.55□□□□□ -1.52
UBBP4-201ENST00000583708 TSPAN13O95857 204 aa5.55□□□□□ -1.52
UBBP4-201ENST00000583708 SSBP3-AS1Q7Z2R9 100 aa5.55□□□□□ -1.52
UBBP4-201ENST00000583708 MYCBP2O75592 4640 aa5.54□□□□□ -1.52
UBBP4-201ENST00000583708 FAT3Q8TDW7 4589 aa5.54□□□□□ -1.52
UBBP4-201ENST00000583708 K7ERJ3 54 aa5.54□□□□□ -1.52
UBBP4-201ENST00000583708 TRIAP1O43715 76 aa5.54□□□□□ -1.52
UBBP4-201ENST00000583708 SCGB1C2P0DMR2 95 aa5.54□□□□□ -1.52
UBBP4-201ENST00000583708 GAGE2AQ6NT46 116 aa5.54□□□□□ -1.52
UBBP4-201ENST00000583708 LAMTOR3Q9UHA4 124 aa5.54□□□□□ -1.52
UBBP4-201ENST00000583708 DMBT1Q9UGM3 2413 aaPredicted RBP5.52□□□□□ -1.53
UBBP4-201ENST00000583708 TRBV20-1A0A075B6N2 111 aa5.52□□□□□ -1.53
UBBP4-201ENST00000583708 DNAL4O96015 105 aa5.52□□□□□ -1.53
UBBP4-201ENST00000583708 TRACP01848 142 aa5.52□□□□□ -1.53
UBBP4-201ENST00000583708 SPAG11AQ6PDA7 123 aa5.52□□□□□ -1.53
UBBP4-201ENST00000583708 TYMSOSQ8TAI1 123 aa5.52□□□□□ -1.53
UBBP4-201ENST00000583708 MT1HL1P0DM35 61 aa5.51□□□□□ -1.53
UBBP4-201ENST00000583708 BATFQ16520 125 aa5.51□□□□□ -1.53
UBBP4-201ENST00000583708 COL5A1-AS1Q5SY13 56 aa5.51□□□□□ -1.53
UBBP4-201ENST00000583708 Q6ZQY7 126 aa5.51□□□□□ -1.53
UBBP4-201ENST00000583708 PRR26Q8N8Z3 221 aa5.51□□□□□ -1.53
UBBP4-201ENST00000583708 LRP1Q07954 4544 aaKnown RBP5.5□□□□□ -1.53
UBBP4-201ENST00000583708 A0A087X002 238 aa5.5□□□□□ -1.53
UBBP4-201ENST00000583708 C9orf118A6NHY6 69 aa5.5□□□□□ -1.53
UBBP4-201ENST00000583708 LINC01547P58512 204 aaPredicted RBP5.5□□□□□ -1.53
UBBP4-201ENST00000583708 Q8N377 158 aa5.5□□□□□ -1.53
UBBP4-201ENST00000583708 ST20-AS1Q8NBB2 130 aa5.5□□□□□ -1.53
UBBP4-201ENST00000583708 PCLOQ9Y6V0 5065 aa5.49□□□□□ -1.53
UBBP4-201ENST00000583708 TMEM256-PLSCR3K7ERE1 68 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms