RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 KCNQ1DNQ9H478 68 aa10.17□□□□□ -0.78
CDK5RAP3-228ENST00000583363 VPS13BQ7Z7G8 4022 aa10.17□□□□□ -0.78
CDK5RAP3-228ENST00000583363 MYCBP2O75592 4640 aa10.16□□□□□ -0.78
CDK5RAP3-228ENST00000583363 K7ERJ3 54 aa10.16□□□□□ -0.78
CDK5RAP3-228ENST00000583363 SNHG12Q9BXW3 62 aa10.16□□□□□ -0.78
CDK5RAP3-228ENST00000583363 RPL13AP40429 203 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-228ENST00000583363 CBY1Q9Y3M2 126 aa10.14□□□□□ -0.79
CDK5RAP3-228ENST00000583363 TRAV23DV6A0A075B6W5 121 aa10.13□□□□□ -0.79
CDK5RAP3-228ENST00000583363 PRYO14603 147 aa10.13□□□□□ -0.79
CDK5RAP3-228ENST00000583363 Q5VSD8 79 aa10.13□□□□□ -0.79
CDK5RAP3-228ENST00000583363 SMIM11BQ8TCY0 68 aa10.13□□□□□ -0.79
CDK5RAP3-228ENST00000583363 FLG2Q5D862 2391 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP3-228ENST00000583363 H7C2G1 150 aa10.11□□□□□ -0.79
CDK5RAP3-228ENST00000583363 SPRR1AP35321 89 aa10.11□□□□□ -0.79
CDK5RAP3-228ENST00000583363 REG3GQ6UW15 175 aa10.11□□□□□ -0.79
CDK5RAP3-228ENST00000583363 PSORS1C2Q9UIG4 136 aa10.11□□□□□ -0.79
CDK5RAP3-228ENST00000583363 SMR3BP02814 79 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-228ENST00000583363 RPL28P46779 137 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-228ENST00000583363 ZNF73O43830 326 aaPredicted RBP10.09□□□□□ -0.79
CDK5RAP3-228ENST00000583363 KRTAP4-16G5E9R7 235 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP3-228ENST00000583363 TSPAN13O95857 204 aa10.08□□□□□ -0.8
CDK5RAP3-228ENST00000583363 Q1RN00 199 aa10.08□□□□□ -0.8
CDK5RAP3-228ENST00000583363 C6orf99Q4VX62 202 aa10.08□□□□□ -0.8
CDK5RAP3-228ENST00000583363 SRRM2Q9UQ35 2752 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-228ENST00000583363 LINC00528Q8N1L1 170 aa10.07□□□□□ -0.8
CDK5RAP3-228ENST00000583363 BCE1O60756 84 aa10.06□□□□□ -0.8
CDK5RAP3-228ENST00000583363 C1orf137Q5JT78 98 aa10.06□□□□□ -0.8
CDK5RAP3-228ENST00000583363 COL5A1-AS1Q5SY13 56 aa10.06□□□□□ -0.8
CDK5RAP3-228ENST00000583363 DIRC1Q969H9 104 aa10.06□□□□□ -0.8
CDK5RAP3-228ENST00000583363 TRBV7-6A0A0J9YX20 115 aa10.05□□□□□ -0.8
CDK5RAP3-228ENST00000583363 TAX1BP3O14907 124 aa10.05□□□□□ -0.8
CDK5RAP3-228ENST00000583363 ETDCA0A1B0GVM5 59 aa10.04□□□□□ -0.8
CDK5RAP3-228ENST00000583363 B5MCH6 92 aa10.04□□□□□ -0.8
CDK5RAP3-228ENST00000583363 VAMP3Q15836 100 aa10.03□□□□□ -0.8
CDK5RAP3-228ENST00000583363 FAM19A1Q7Z5A9 133 aa10.03□□□□□ -0.8
CDK5RAP3-228ENST00000583363 TRIAP1O43715 76 aa10.02□□□□□ -0.81
CDK5RAP3-228ENST00000583363 COX7BP24311 80 aa10.02□□□□□ -0.81
CDK5RAP3-228ENST00000583363 PSMB2P49721 201 aa10.02□□□□□ -0.81
CDK5RAP3-228ENST00000583363 RPL37AP61513 92 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-228ENST00000583363 C9orf118A6NHY6 69 aa10.01□□□□□ -0.81
CDK5RAP3-228ENST00000583363 H0Y9J4 135 aa10.01□□□□□ -0.81
CDK5RAP3-228ENST00000583363 IGLV7-43P04211 117 aa10.01□□□□□ -0.81
CDK5RAP3-228ENST00000583363 ELOF1P60002 83 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-228ENST00000583363 KRTAP13-1Q8IUC0 172 aa10.01□□□□□ -0.81
CDK5RAP3-228ENST00000583363 H0YGX0 51 aa10□□□□□ -0.81
CDK5RAP3-228ENST00000583363 UBE2AP49459 152 aa10□□□□□ -0.81
CDK5RAP3-228ENST00000583363 Q6ZRX8 168 aa10□□□□□ -0.81
CDK5RAP3-228ENST00000583363 NAA38Q9BRA0 125 aaKnown RBP10□□□□□ -0.81
CDK5RAP3-228ENST00000583363 FAM229AH3BQW9 127 aa9.99□□□□□ -0.81
CDK5RAP3-228ENST00000583363 COX6CP09669 75 aa9.99□□□□□ -0.81
CDK5RAP3-228ENST00000583363 PRLHP81277 87 aa9.99□□□□□ -0.81
CDK5RAP3-228ENST00000583363 H3BUT2 72 aa9.98□□□□□ -0.81
CDK5RAP3-228ENST00000583363 ZNF861PO60384 105 aa9.98□□□□□ -0.81
CDK5RAP3-228ENST00000583363 SCGB1C2P0DMR2 95 aa9.98□□□□□ -0.81
CDK5RAP3-228ENST00000583363 KRTAP10-4P60372 401 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-228ENST00000583363 Q9BRP9 147 aa9.97□□□□□ -0.81
CDK5RAP3-228ENST00000583363 LINC00575Q6W349 94 aa9.96□□□□□ -0.82
CDK5RAP3-228ENST00000583363 PLA2G1BP04054 148 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-228ENST00000583363 SMCR5Q8TEV8 140 aa9.95□□□□□ -0.82
CDK5RAP3-228ENST00000583363 DHRS4-AS1Q9P1J3 65 aa9.95□□□□□ -0.82
CDK5RAP3-228ENST00000583363 J3QL48 77 aa9.94□□□□□ -0.82
CDK5RAP3-228ENST00000583363 FAM218AQ96MZ4 157 aa9.94□□□□□ -0.82
CDK5RAP3-228ENST00000583363 CLEC2BQ92478 149 aa9.93□□□□□ -0.82
CDK5RAP3-228ENST00000583363 HIGD2AQ9BW72 106 aa9.93□□□□□ -0.82
CDK5RAP3-228ENST00000583363 PKHD1L1Q86WI1 4243 aa9.92□□□□□ -0.82
CDK5RAP3-228ENST00000583363 A0A1W2PPM0 123 aa9.92□□□□□ -0.82
CDK5RAP3-228ENST00000583363 SLC25A20O43772 301 aa9.92□□□□□ -0.82
CDK5RAP3-228ENST00000583363 ERC2-IT1O76042 136 aa9.92□□□□□ -0.82
CDK5RAP3-228ENST00000583363 hADV29S1A0JD25 119 aa9.91□□□□□ -0.82
CDK5RAP3-228ENST00000583363 A0A1B0GX51 115 aa9.9□□□□□ -0.82
CDK5RAP3-228ENST00000583363 LYRM7Q5U5X0 104 aa9.9□□□□□ -0.82
CDK5RAP3-228ENST00000583363 SPINK6Q6UWN8 80 aa9.9□□□□□ -0.82
CDK5RAP3-228ENST00000583363 TCL1BO95988 128 aa9.89□□□□□ -0.83
CDK5RAP3-228ENST00000583363 FABP2P12104 132 aa9.89□□□□□ -0.83
CDK5RAP3-228ENST00000583363 LST1O00453 97 aa9.88□□□□□ -0.83
CDK5RAP3-228ENST00000583363 SNCGO76070 127 aa9.88□□□□□ -0.83
CDK5RAP3-228ENST00000583363 HMCN2Q8NDA2 5059 aa9.88□□□□□ -0.83
CDK5RAP3-228ENST00000583363 TRBV20-1A0A075B6N2 111 aa9.87□□□□□ -0.83
CDK5RAP3-228ENST00000583363 KRTAP29-1A8MX34 341 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-228ENST00000583363 ATXN8Q156A1 80 aa9.86□□□□□ -0.83
CDK5RAP3-228ENST00000583363 LRP1Q07954 4544 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-228ENST00000583363 TRACP01848 142 aa9.85□□□□□ -0.83
CDK5RAP3-228ENST00000583363 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-228ENST00000583363 ST20-AS1Q8NBB2 130 aa9.85□□□□□ -0.83
CDK5RAP3-228ENST00000583363 UBR4Q5T4S7 5183 aa9.84□□□□□ -0.83
CDK5RAP3-228ENST00000583363 Q6ZQY7 126 aa9.83□□□□□ -0.84
CDK5RAP3-228ENST00000583363 SPRR4Q96PI1 79 aa9.83□□□□□ -0.84
CDK5RAP3-228ENST00000583363 SPCS1Q9Y6A9 102 aa9.83□□□□□ -0.84
CDK5RAP3-228ENST00000583363 LINC01547P58512 204 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-228ENST00000583363 FAT3Q8TDW7 4589 aa9.82□□□□□ -0.84
CDK5RAP3-228ENST00000583363 A0A1B0GV90 55 aa9.81□□□□□ -0.84
CDK5RAP3-228ENST00000583363 ZNF706Q9Y5V0 76 aaPredicted RBP9.81□□□□□ -0.84
CDK5RAP3-228ENST00000583363 IGLV5-48A0A075B6I7 105 aa9.8□□□□□ -0.84
CDK5RAP3-228ENST00000583363 DNAL4O96015 105 aa9.8□□□□□ -0.84
CDK5RAP3-228ENST00000583363 GAGE2AQ6NT46 116 aa9.8□□□□□ -0.84
CDK5RAP3-228ENST00000583363 DEFB105AQ8NG35 78 aa9.8□□□□□ -0.84
CDK5RAP3-228ENST00000583363 K7EP34 96 aa9.79□□□□□ -0.84
CDK5RAP3-228ENST00000583363 SPRR1BP22528 89 aa9.79□□□□□ -0.84
CDK5RAP3-228ENST00000583363 OCIAD2Q56VL3 154 aa9.79□□□□□ -0.84
CDK5RAP3-228ENST00000583363 Q8N377 158 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms