RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 NDUFA1O15239 70 aa4.55□□□□□ -1.68
CCDC47-205ENST00000582331 TIMM17BO60830 172 aa4.55□□□□□ -1.68
CCDC47-205ENST00000582331 KRTAP1-4P0C5Y4 121 aa4.55□□□□□ -1.68
CCDC47-205ENST00000582331 CFC1BP0CG36 223 aa4.55□□□□□ -1.68
CCDC47-205ENST00000582331 CFC1P0CG37 223 aa4.55□□□□□ -1.68
CCDC47-205ENST00000582331 FABP2P12104 132 aa4.55□□□□□ -1.68
CCDC47-205ENST00000582331 SPANXDQ9BXN6 97 aa4.55□□□□□ -1.68
CCDC47-205ENST00000582331 SPANXCQ9NY87 97 aa4.55□□□□□ -1.68
CCDC47-205ENST00000582331 SPCS1Q9Y6A9 102 aa4.55□□□□□ -1.68
CCDC47-205ENST00000582331 IGHV3OR16-9A0A0B4J2B5 98 aa4.54□□□□□ -1.68
CCDC47-205ENST00000582331 A4D1N5 150 aa4.54□□□□□ -1.68
CCDC47-205ENST00000582331 TMEM238C9JI98 176 aa4.54□□□□□ -1.68
CCDC47-205ENST00000582331 APOMO95445 188 aa4.54□□□□□ -1.68
CCDC47-205ENST00000582331 TSPAN13O95857 204 aa4.54□□□□□ -1.68
CCDC47-205ENST00000582331 SS18Q15532 418 aa4.54□□□□□ -1.68
CCDC47-205ENST00000582331 GTF2H5Q6ZYL4 71 aa4.54□□□□□ -1.68
CCDC47-205ENST00000582331 ZNF625Q96I27 306 aaPredicted RBP4.54□□□□□ -1.68
CCDC47-205ENST00000582331 RPL18AQ02543 176 aaKnown RBP4.53□□□□□ -1.68
CCDC47-205ENST00000582331 CD164L2Q6UWJ8 174 aa4.53□□□□□ -1.68
CCDC47-205ENST00000582331 CAMK2N2Q96S95 79 aa4.53□□□□□ -1.68
CCDC47-205ENST00000582331 A0A0B4J2C4 111 aa4.52□□□□□ -1.69
CCDC47-205ENST00000582331 IFITM1P13164 125 aa4.52□□□□□ -1.69
CCDC47-205ENST00000582331 MALP21145 153 aa4.52□□□□□ -1.69
CCDC47-205ENST00000582331 RPL24P83731 157 aaKnown RBP4.52□□□□□ -1.69
CCDC47-205ENST00000582331 KRTAP11-1Q8IUC1 163 aa4.52□□□□□ -1.69
CCDC47-205ENST00000582331 PRO1854Q9UHT4 67 aa4.52□□□□□ -1.69
CCDC47-205ENST00000582331 MUC17Q685J3 4493 aa4.52□□□□□ -1.69
CCDC47-205ENST00000582331 FSIP2Q5CZC0 6907 aa4.51□□□□□ -1.69
CCDC47-205ENST00000582331 PRSS2P07478 247 aa4.51□□□□□ -1.69
CCDC47-205ENST00000582331 HERV-K104P63124 156 aa4.51□□□□□ -1.69
CCDC47-205ENST00000582331 LINC01561Q8N1V8 128 aa4.51□□□□□ -1.69
CCDC47-205ENST00000582331 COX7B2Q8TF08 81 aa4.51□□□□□ -1.69
CCDC47-205ENST00000582331 C2orf48Q96LS8 159 aa4.51□□□□□ -1.69
CCDC47-205ENST00000582331 COX7A2LO14548 114 aa4.5□□□□□ -1.69
CCDC47-205ENST00000582331 SOSTDC1Q6X4U4 206 aa4.5□□□□□ -1.69
CCDC47-205ENST00000582331 C5orf38Q86SI9 138 aa4.5□□□□□ -1.69
CCDC47-205ENST00000582331 LINC00308Q8TCZ7 52 aa4.5□□□□□ -1.69
CCDC47-205ENST00000582331 PPDPFQ9H3Y8 114 aa4.5□□□□□ -1.69
CCDC47-205ENST00000582331 PRO0461Q9UI25 63 aa4.5□□□□□ -1.69
CCDC47-205ENST00000582331 FAM168BA1KXE4 195 aa4.49□□□□□ -1.69
CCDC47-205ENST00000582331 DAND5Q8N907 189 aa4.49□□□□□ -1.69
CCDC47-205ENST00000582331 ERG28Q9UKR5 140 aa4.49□□□□□ -1.69
CCDC47-205ENST00000582331 A0A0U1RRA0 63 aa4.48□□□□□ -1.69
CCDC47-205ENST00000582331 H3BMG7 143 aa4.48□□□□□ -1.69
CCDC47-205ENST00000582331 NPC2P61916 151 aa4.48□□□□□ -1.69
CCDC47-205ENST00000582331 UBE2BP63146 152 aa4.48□□□□□ -1.69
CCDC47-205ENST00000582331 KIAA0087Q14695 138 aa4.48□□□□□ -1.69
CCDC47-205ENST00000582331 MEIG1Q5JSS6 88 aa4.48□□□□□ -1.69
CCDC47-205ENST00000582331 FAM19A5Q7Z5A7 132 aaPredicted RBP4.48□□□□□ -1.69
CCDC47-205ENST00000582331 TOMM7Q9P0U1 55 aa4.48□□□□□ -1.69
CCDC47-205ENST00000582331 LOC107984156A0A0G2JMH3 177 aa4.47□□□□□ -1.69
CCDC47-205ENST00000582331 TRBV30A0A0K0K1B3 111 aa4.47□□□□□ -1.69
CCDC47-205ENST00000582331 TCL1BO95988 128 aa4.47□□□□□ -1.69
CCDC47-205ENST00000582331 LINC01547P58512 204 aaPredicted RBP4.47□□□□□ -1.69
CCDC47-205ENST00000582331 SPAG11BQ08648 103 aa4.47□□□□□ -1.69
CCDC47-205ENST00000582331 OCIAD2Q56VL3 154 aa4.47□□□□□ -1.69
CCDC47-205ENST00000582331 SFTA2Q6UW10 78 aa4.47□□□□□ -1.69
CCDC47-205ENST00000582331 ARL17AQ8IVW1 177 aa4.47□□□□□ -1.69
CCDC47-205ENST00000582331 Q8IZM0 81 aa4.47□□□□□ -1.69
CCDC47-205ENST00000582331 TRBV20-1A0A075B6N2 111 aa4.46□□□□□ -1.7
CCDC47-205ENST00000582331 F8W1H4 67 aa4.46□□□□□ -1.7
CCDC47-205ENST00000582331 F8WDY8 70 aa4.46□□□□□ -1.7
CCDC47-205ENST00000582331 ZNF861PO60384 105 aa4.46□□□□□ -1.7
CCDC47-205ENST00000582331 PSMB2P49721 201 aa4.46□□□□□ -1.7
CCDC47-205ENST00000582331 TPRXLQ17RH7 258 aa4.46□□□□□ -1.7
CCDC47-205ENST00000582331 LYRM7Q5U5X0 104 aa4.46□□□□□ -1.7
CCDC47-205ENST00000582331 TYMSOSQ8TAI1 123 aa4.46□□□□□ -1.7
CCDC47-205ENST00000582331 H7C2G1 150 aa4.45□□□□□ -1.7
CCDC47-205ENST00000582331 M0QXV9 152 aa4.45□□□□□ -1.7
CCDC47-205ENST00000582331 TRIAP1O43715 76 aa4.45□□□□□ -1.7
CCDC47-205ENST00000582331 TLX1NBP0CAT3 122 aa4.45□□□□□ -1.7
CCDC47-205ENST00000582331 SCGB1C2P0DMR2 95 aa4.45□□□□□ -1.7
CCDC47-205ENST00000582331 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
CCDC47-205ENST00000582331 GAGE2EQ4V326 116 aa4.45□□□□□ -1.7
CCDC47-205ENST00000582331 C6orf226Q5I0X4 101 aa4.45□□□□□ -1.7
CCDC47-205ENST00000582331 KRTAP7-1Q8IUC3 87 aa4.45□□□□□ -1.7
CCDC47-205ENST00000582331 MIR7-3HGQ8N6C7 128 aa4.45□□□□□ -1.7
CCDC47-205ENST00000582331 COPS9Q8WXC6 57 aa4.45□□□□□ -1.7
CCDC47-205ENST00000582331 RETNLBQ9BQ08 111 aa4.45□□□□□ -1.7
CCDC47-205ENST00000582331 GAGE2DQ9UEU5 116 aa4.45□□□□□ -1.7
CCDC47-205ENST00000582331 IGLV7-46A0A075B6I9 117 aa4.44□□□□□ -1.7
CCDC47-205ENST00000582331 A0A087X002 238 aa4.44□□□□□ -1.7
CCDC47-205ENST00000582331 CRYGAP11844 174 aa4.44□□□□□ -1.7
CCDC47-205ENST00000582331 LINC00158P58513 81 aa4.44□□□□□ -1.7
CCDC47-205ENST00000582331 Q1RN00 199 aa4.44□□□□□ -1.7
CCDC47-205ENST00000582331 C2orf82Q6UX34 121 aa4.44□□□□□ -1.7
CCDC47-205ENST00000582331 IGKV2-28A0A075B6P5 120 aa4.43□□□□□ -1.7
CCDC47-205ENST00000582331 K7ERU9 68 aa4.43□□□□□ -1.7
CCDC47-205ENST00000582331 IGKV2D-28P01615 120 aa4.43□□□□□ -1.7
CCDC47-205ENST00000582331 CXCL5P42830 114 aa4.43□□□□□ -1.7
CCDC47-205ENST00000582331 C10orf25Q5T742 122 aa4.43□□□□□ -1.7
CCDC47-205ENST00000582331 UNQ6190/PRO20217Q6UXQ8 127 aa4.43□□□□□ -1.7
CCDC47-205ENST00000582331 MTURNQ8N3F0 131 aa4.43□□□□□ -1.7
CCDC47-205ENST00000582331 C6orf48Q9UBA6 75 aa4.43□□□□□ -1.7
CCDC47-205ENST00000582331 PFN2P35080 140 aa4.42□□□□□ -1.7
CCDC47-205ENST00000582331 ETDBQ3ZM63 59 aa4.42□□□□□ -1.7
CCDC47-205ENST00000582331 LINC00337Q8N6G1 96 aa4.42□□□□□ -1.7
CCDC47-205ENST00000582331 SND1-IT1Q9HBX3 110 aa4.42□□□□□ -1.7
CCDC47-205ENST00000582331 CKS1BP61024 79 aa4.41□□□□□ -1.7
CCDC47-205ENST00000582331 COX17Q14061 63 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms