RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 RAB37Q96AX2 223 aa5.87□□□□□ -1.47
RFFL-210ENST00000582308 TRAV23DV6A0A075B6W5 121 aa5.86□□□□□ -1.47
RFFL-210ENST00000582308 KRTAP4-16G5E9R7 235 aaPredicted RBP5.86□□□□□ -1.47
RFFL-210ENST00000582308 KRTAP10-4P60372 401 aaPredicted RBP5.86□□□□□ -1.47
RFFL-210ENST00000582308 RPL37AP61513 92 aaKnown RBP5.86□□□□□ -1.47
RFFL-210ENST00000582308 C1orf137Q5JT78 98 aa5.86□□□□□ -1.47
RFFL-210ENST00000582308 SMIM11BQ8TCY0 68 aa5.86□□□□□ -1.47
RFFL-210ENST00000582308 PRO1854Q9UHT4 67 aa5.86□□□□□ -1.47
RFFL-210ENST00000582308 FAM229AH3BQW9 127 aa5.85□□□□□ -1.47
RFFL-210ENST00000582308 H7C2G1 150 aa5.85□□□□□ -1.47
RFFL-210ENST00000582308 ZNF73O43830 326 aaPredicted RBP5.85□□□□□ -1.47
RFFL-210ENST00000582308 BCE1O60756 84 aa5.85□□□□□ -1.47
RFFL-210ENST00000582308 BATFQ16520 125 aa5.85□□□□□ -1.47
RFFL-210ENST00000582308 Q8N1X5 172 aa5.85□□□□□ -1.47
RFFL-210ENST00000582308 PKHD1L1Q86WI1 4243 aa5.85□□□□□ -1.47
RFFL-210ENST00000582308 C6orf99Q4VX62 202 aa5.84□□□□□ -1.47
RFFL-210ENST00000582308 Q5VSD8 79 aa5.84□□□□□ -1.47
RFFL-210ENST00000582308 CBY1Q9Y3M2 126 aa5.84□□□□□ -1.47
RFFL-210ENST00000582308 B5MCH6 92 aa5.83□□□□□ -1.48
RFFL-210ENST00000582308 IGLV7-43P04211 117 aa5.83□□□□□ -1.48
RFFL-210ENST00000582308 FAM19A1Q7Z5A9 133 aa5.83□□□□□ -1.48
RFFL-210ENST00000582308 KRTAP13-1Q8IUC0 172 aa5.83□□□□□ -1.48
RFFL-210ENST00000582308 DIRC1Q969H9 104 aa5.83□□□□□ -1.48
RFFL-210ENST00000582308 SNHG12Q9BXW3 62 aa5.83□□□□□ -1.48
RFFL-210ENST00000582308 ETDCA0A1B0GVM5 59 aa5.82□□□□□ -1.48
RFFL-210ENST00000582308 PLA2G1BP04054 148 aaKnown RBP5.82□□□□□ -1.48
RFFL-210ENST00000582308 RPL28P46779 137 aaKnown RBP5.82□□□□□ -1.48
RFFL-210ENST00000582308 PRLHP81277 87 aa5.82□□□□□ -1.48
RFFL-210ENST00000582308 TRBV7-6A0A0J9YX20 115 aa5.81□□□□□ -1.48
RFFL-210ENST00000582308 TSPAN13O95857 204 aa5.81□□□□□ -1.48
RFFL-210ENST00000582308 UBE2AP49459 152 aa5.81□□□□□ -1.48
RFFL-210ENST00000582308 Q6ZRX8 168 aa5.81□□□□□ -1.48
RFFL-210ENST00000582308 H0Y9J4 135 aa5.8□□□□□ -1.48
RFFL-210ENST00000582308 ZNF861PO60384 105 aa5.8□□□□□ -1.48
RFFL-210ENST00000582308 COX7BP24311 80 aa5.8□□□□□ -1.48
RFFL-210ENST00000582308 ELOF1P60002 83 aaKnown RBP5.8□□□□□ -1.48
RFFL-210ENST00000582308 Q1RN00 199 aa5.8□□□□□ -1.48
RFFL-210ENST00000582308 Q9BRP9 147 aa5.8□□□□□ -1.48
RFFL-210ENST00000582308 KRTAP4-5Q9BYR2 181 aa5.8□□□□□ -1.48
RFFL-210ENST00000582308 TRIAP1O43715 76 aa5.79□□□□□ -1.48
RFFL-210ENST00000582308 HERC2O95714 4834 aa5.78□□□□□ -1.48
RFFL-210ENST00000582308 VAMP3Q15836 100 aa5.78□□□□□ -1.48
RFFL-210ENST00000582308 SMCR5Q8TEV8 140 aa5.78□□□□□ -1.48
RFFL-210ENST00000582308 NAA38Q9BRA0 125 aaKnown RBP5.78□□□□□ -1.48
RFFL-210ENST00000582308 TAX1BP3O14907 124 aa5.77□□□□□ -1.49
RFFL-210ENST00000582308 ERC2-IT1O76042 136 aa5.77□□□□□ -1.49
RFFL-210ENST00000582308 PSMB2P49721 201 aa5.77□□□□□ -1.49
RFFL-210ENST00000582308 HIGD2AQ9BW72 106 aa5.77□□□□□ -1.49
RFFL-210ENST00000582308 FLG2Q5D862 2391 aaPredicted RBP5.76□□□□□ -1.49
RFFL-210ENST00000582308 INAFM2P0DMQ5 153 aa5.76□□□□□ -1.49
RFFL-210ENST00000582308 SPINK6Q6UWN8 80 aa5.76□□□□□ -1.49
RFFL-210ENST00000582308 LINC00575Q6W349 94 aa5.76□□□□□ -1.49
RFFL-210ENST00000582308 C9orf118A6NHY6 69 aa5.75□□□□□ -1.49
RFFL-210ENST00000582308 H0YGX0 51 aa5.75□□□□□ -1.49
RFFL-210ENST00000582308 COL5A1-AS1Q5SY13 56 aa5.75□□□□□ -1.49
RFFL-210ENST00000582308 CLEC2BQ92478 149 aa5.75□□□□□ -1.49
RFFL-210ENST00000582308 FAM218AQ96MZ4 157 aa5.75□□□□□ -1.49
RFFL-210ENST00000582308 DHRS4-AS1Q9P1J3 65 aa5.75□□□□□ -1.49
RFFL-210ENST00000582308 H3BUT2 72 aa5.74□□□□□ -1.49
RFFL-210ENST00000582308 COX6CP09669 75 aa5.74□□□□□ -1.49
RFFL-210ENST00000582308 SCGB1C2P0DMR2 95 aa5.73□□□□□ -1.49
RFFL-210ENST00000582308 ST20-AS1Q8NBB2 130 aa5.73□□□□□ -1.49
RFFL-210ENST00000582308 hADV29S1A0JD25 119 aa5.72□□□□□ -1.49
RFFL-210ENST00000582308 SLC25A20O43772 301 aa5.72□□□□□ -1.49
RFFL-210ENST00000582308 KRTAP1-4P0C5Y4 121 aa5.71□□□□□ -1.5
RFFL-210ENST00000582308 SPRR4Q96PI1 79 aa5.71□□□□□ -1.5
RFFL-210ENST00000582308 A0A1W2PPM0 123 aa5.7□□□□□ -1.5
RFFL-210ENST00000582308 ANAPC11Q9NYG5 84 aa5.7□□□□□ -1.5
RFFL-210ENST00000582308 FAT3Q8TDW7 4589 aa5.69□□□□□ -1.5
RFFL-210ENST00000582308 A0A1B0GX51 115 aa5.69□□□□□ -1.5
RFFL-210ENST00000582308 LST1O00453 97 aa5.69□□□□□ -1.5
RFFL-210ENST00000582308 TCL1BO95988 128 aa5.69□□□□□ -1.5
RFFL-210ENST00000582308 LINC01547P58512 204 aaPredicted RBP5.69□□□□□ -1.5
RFFL-210ENST00000582308 GAGE2AQ6NT46 116 aa5.69□□□□□ -1.5
RFFL-210ENST00000582308 Q6ZQY7 126 aa5.69□□□□□ -1.5
RFFL-210ENST00000582308 DEFB105AQ8NG35 78 aa5.69□□□□□ -1.5
RFFL-210ENST00000582308 ZNF706Q9Y5V0 76 aaPredicted RBP5.69□□□□□ -1.5
RFFL-210ENST00000582308 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
RFFL-210ENST00000582308 IGLV5-48A0A075B6I7 105 aa5.68□□□□□ -1.5
RFFL-210ENST00000582308 SNCGO76070 127 aa5.68□□□□□ -1.5
RFFL-210ENST00000582308 LINC00483Q53H64 154 aa5.68□□□□□ -1.5
RFFL-210ENST00000582308 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.68□□□□□ -1.5
RFFL-210ENST00000582308 Q8N377 158 aa5.68□□□□□ -1.5
RFFL-210ENST00000582308 TRACP01848 142 aa5.67□□□□□ -1.5
RFFL-210ENST00000582308 FABP2P12104 132 aa5.67□□□□□ -1.5
RFFL-210ENST00000582308 SPRR1BP22528 89 aa5.67□□□□□ -1.5
RFFL-210ENST00000582308 LYRM7Q5U5X0 104 aa5.67□□□□□ -1.5
RFFL-210ENST00000582308 TRBV20-1A0A075B6N2 111 aa5.66□□□□□ -1.5
RFFL-210ENST00000582308 A0A087X002 238 aa5.66□□□□□ -1.5
RFFL-210ENST00000582308 TEX49A0A1B0GTD5 131 aa5.66□□□□□ -1.5
RFFL-210ENST00000582308 ATXN8Q156A1 80 aa5.66□□□□□ -1.5
RFFL-210ENST00000582308 MYCBP2O75592 4640 aa5.66□□□□□ -1.5
RFFL-210ENST00000582308 ABCA13Q86UQ4 5058 aa5.66□□□□□ -1.5
RFFL-210ENST00000582308 FAM229BQ4G0N7 80 aa5.65□□□□□ -1.5
RFFL-210ENST00000582308 LINC01600Q96MT4 127 aa5.65□□□□□ -1.5
RFFL-210ENST00000582308 TNXBP22105 4242 aa5.64□□□□□ -1.51
RFFL-210ENST00000582308 DNAL4O96015 105 aa5.64□□□□□ -1.51
RFFL-210ENST00000582308 KRTAP13-2Q52LG2 175 aa5.64□□□□□ -1.51
RFFL-210ENST00000582308 OCIAD2Q56VL3 154 aa5.64□□□□□ -1.51
RFFL-210ENST00000582308 SMIM29Q86T20 159 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms