RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 MUC17Q685J3 4493 aa-0.29□□□□□ -2.46
SMCHD1-207ENST00000581711 PZPP20742 1482 aa-0.29□□□□□ -2.46
SMCHD1-207ENST00000581711 PLEKHH2Q8IVE3 1493 aa-0.29□□□□□ -2.46
SMCHD1-207ENST00000581711 NLRP1Q9C000 1473 aa-0.29□□□□□ -2.46
SMCHD1-207ENST00000581711 ABCA3Q99758 1704 aa-0.3□□□□□ -2.46
SMCHD1-207ENST00000581711 PKHD1L1Q86WI1 4243 aa-0.3□□□□□ -2.46
SMCHD1-207ENST00000581711 CC2D2AQ9P2K1 1620 aa-0.3□□□□□ -2.46
SMCHD1-207ENST00000581711 A0A1B0GU69 56 aa-0.3□□□□□ -2.46
SMCHD1-207ENST00000581711 MRPS10P82664 201 aaKnown RBP-0.3□□□□□ -2.46
SMCHD1-207ENST00000581711 GTF2H5Q6ZYL4 71 aa-0.3□□□□□ -2.46
SMCHD1-207ENST00000581711 TMEM203Q969S6 136 aa-0.3□□□□□ -2.46
SMCHD1-207ENST00000581711 CGREF1Q99674 301 aa-0.3□□□□□ -2.46
SMCHD1-207ENST00000581711 VAMP8Q9BV40 100 aa-0.3□□□□□ -2.46
SMCHD1-207ENST00000581711 CRIPTQ9P021 101 aa-0.3□□□□□ -2.46
SMCHD1-207ENST00000581711 CCDC141Q6ZP82 1450 aa-0.3□□□□□ -2.46
SMCHD1-207ENST00000581711 TOPAZ1Q8N9V7 1692 aa-0.3□□□□□ -2.46
SMCHD1-207ENST00000581711 A0A087WVE0 104 aa-0.31□□□□□ -2.46
SMCHD1-207ENST00000581711 SARNPP82979 210 aaKnown RBP-0.31□□□□□ -2.46
SMCHD1-207ENST00000581711 C2orf88Q9BSF0 95 aa-0.31□□□□□ -2.46
SMCHD1-207ENST00000581711 KNDC1Q76NI1 1749 aa-0.31□□□□□ -2.46
SMCHD1-207ENST00000581711 DNAH9Q9NYC9 4486 aa-0.31□□□□□ -2.46
SMCHD1-207ENST00000581711 GOLGB1Q14789 3259 aaKnown RBP-0.31□□□□□ -2.46
SMCHD1-207ENST00000581711 COL4A6Q14031 1691 aa-0.31□□□□□ -2.46
SMCHD1-207ENST00000581711 hADV29S1A0JD25 119 aa-0.32□□□□□ -2.46
SMCHD1-207ENST00000581711 C7orf77A4D0Y5 90 aa-0.32□□□□□ -2.46
SMCHD1-207ENST00000581711 TMEM262E9PQX1 116 aa-0.32□□□□□ -2.46
SMCHD1-207ENST00000581711 H3BQF6 201 aa-0.32□□□□□ -2.46
SMCHD1-207ENST00000581711 I3L3M4 83 aa-0.32□□□□□ -2.46
SMCHD1-207ENST00000581711 DEFB135Q30KP9 77 aa-0.32□□□□□ -2.46
SMCHD1-207ENST00000581711 C6orf201Q7Z4U5 140 aa-0.32□□□□□ -2.46
SMCHD1-207ENST00000581711 SACSQ9NZJ4 4579 aa-0.32□□□□□ -2.46
SMCHD1-207ENST00000581711 DNAH3Q8TD57 4116 aa-0.32□□□□□ -2.46
SMCHD1-207ENST00000581711 KIAA1551Q9HCM1 1747 aa-0.33□□□□□ -2.46
SMCHD1-207ENST00000581711 FAM135AQ9P2D6 1515 aa-0.33□□□□□ -2.46
SMCHD1-207ENST00000581711 SHPRHQ149N8 1683 aa-0.33□□□□□ -2.46
SMCHD1-207ENST00000581711 KIF20BQ96Q89 1820 aa-0.33□□□□□ -2.46
SMCHD1-207ENST00000581711 NKTRP30414 1462 aaKnown RBP-0.33□□□□□ -2.46
SMCHD1-207ENST00000581711 ANK3Q12955 4377 aaKnown RBP-0.33□□□□□ -2.46
SMCHD1-207ENST00000581711 TARBP1Q13395 1621 aaKnown RBP-0.33□□□□□ -2.46
SMCHD1-207ENST00000581711 LINC00587B1AMM8 73 aa-0.33□□□□□ -2.46
SMCHD1-207ENST00000581711 HSD52Q0P140 79 aa-0.33□□□□□ -2.46
SMCHD1-207ENST00000581711 EDC4Q6P2E9 1401 aaKnown RBP-0.33□□□□□ -2.46
SMCHD1-207ENST00000581711 LRRC37AA6NMS7 1700 aa-0.33□□□□□ -2.46
SMCHD1-207ENST00000581711 MON2Q7Z3U7 1717 aa-0.33□□□□□ -2.46
SMCHD1-207ENST00000581711 CMYA5Q8N3K9 4069 aa-0.34□□□□□ -2.46
SMCHD1-207ENST00000581711 TRBV25-1A0A075B6N4 114 aa-0.34□□□□□ -2.46
SMCHD1-207ENST00000581711 A0A0G2JND7 137 aa-0.34□□□□□ -2.46
SMCHD1-207ENST00000581711 H0Y9P7 68 aa-0.34□□□□□ -2.46
SMCHD1-207ENST00000581711 NDUFC1O43677 76 aa-0.34□□□□□ -2.46
SMCHD1-207ENST00000581711 SMR3BP02814 79 aaPredicted RBP-0.34□□□□□ -2.46
SMCHD1-207ENST00000581711 GNGT1P63211 74 aa-0.34□□□□□ -2.46
SMCHD1-207ENST00000581711 PMCHL1Q16048 86 aa-0.34□□□□□ -2.46
SMCHD1-207ENST00000581711 H1FX-AS1Q4G0G2 97 aa-0.34□□□□□ -2.46
SMCHD1-207ENST00000581711 PSMG4Q5JS54 123 aa-0.34□□□□□ -2.46
SMCHD1-207ENST00000581711 DEFB107AQ8IZN7 70 aa-0.34□□□□□ -2.46
SMCHD1-207ENST00000581711 CACFD1Q9UGQ2 172 aa-0.34□□□□□ -2.46
SMCHD1-207ENST00000581711 DNAH6Q9C0G6 4158 aa-0.34□□□□□ -2.46
SMCHD1-207ENST00000581711 KNL1Q8NG31 2342 aa-0.35□□□□□ -2.46
SMCHD1-207ENST00000581711 TRRAPQ9Y4A5 3859 aa-0.35□□□□□ -2.46
SMCHD1-207ENST00000581711 ABCC5O15440 1437 aa-0.35□□□□□ -2.47
SMCHD1-207ENST00000581711 C20orf202A1L168 122 aa-0.35□□□□□ -2.47
SMCHD1-207ENST00000581711 GNGT2O14610 69 aa-0.35□□□□□ -2.47
SMCHD1-207ENST00000581711 ARMS2P0C7Q2 107 aa-0.35□□□□□ -2.47
SMCHD1-207ENST00000581711 RGPD2P0DJD1 1756 aa-0.35□□□□□ -2.47
SMCHD1-207ENST00000581711 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.35□□□□□ -2.47
SMCHD1-207ENST00000581711 MLH3Q9UHC1 1453 aa-0.35□□□□□ -2.47
SMCHD1-207ENST00000581711 C5P01031 1676 aa-0.36□□□□□ -2.47
SMCHD1-207ENST00000581711 CCL22O00626 93 aa-0.36□□□□□ -2.47
SMCHD1-207ENST00000581711 MPC2O95563 127 aa-0.36□□□□□ -2.47
SMCHD1-207ENST00000581711 KRTAP6-2Q3LI66 62 aa-0.36□□□□□ -2.47
SMCHD1-207ENST00000581711 C9orf62Q8N4C0 152 aa-0.36□□□□□ -2.47
SMCHD1-207ENST00000581711 SMARCA2P51531 1590 aa-0.36□□□□□ -2.47
SMCHD1-207ENST00000581711 MYH4Q9Y623 1939 aa-0.36□□□□□ -2.47
SMCHD1-207ENST00000581711 BCORQ6W2J9 1755 aa-0.37□□□□□ -2.47
SMCHD1-207ENST00000581711 ZFYVE16Q7Z3T8 1539 aa-0.37□□□□□ -2.47
SMCHD1-207ENST00000581711 ABCC2Q92887 1545 aa-0.37□□□□□ -2.47
SMCHD1-207ENST00000581711 H7BZZ5 65 aa-0.37□□□□□ -2.47
SMCHD1-207ENST00000581711 UQCRHP07919 91 aa-0.37□□□□□ -2.47
SMCHD1-207ENST00000581711 KRTAP19-8Q3LI54 63 aa-0.37□□□□□ -2.47
SMCHD1-207ENST00000581711 HEPN1Q6WQI6 88 aa-0.37□□□□□ -2.47
SMCHD1-207ENST00000581711 TRGV9Q99603 122 aa-0.37□□□□□ -2.47
SMCHD1-207ENST00000581711 MRPL34Q9BQ48 92 aaKnown RBP-0.37□□□□□ -2.47
SMCHD1-207ENST00000581711 AP4S1Q9Y587 144 aa-0.37□□□□□ -2.47
SMCHD1-207ENST00000581711 AKAP9Q99996 3911 aa-0.37□□□□□ -2.47
SMCHD1-207ENST00000581711 UBR3Q6ZT12 1888 aa-0.37□□□□□ -2.47
SMCHD1-207ENST00000581711 CUX1P39880 1505 aa-0.38□□□□□ -2.47
SMCHD1-207ENST00000581711 PRDM15P57071 1507 aaPredicted RBP-0.38□□□□□ -2.47
SMCHD1-207ENST00000581711 CRYBG1Q9Y4K1 1723 aa-0.38□□□□□ -2.47
SMCHD1-207ENST00000581711 TRAV30A0A087WSZ9 112 aa-0.38□□□□□ -2.47
SMCHD1-207ENST00000581711 TRBV7-7A0A0K0K1E9 115 aa-0.38□□□□□ -2.47
SMCHD1-207ENST00000581711 SPTY2D1-AS1A0A0U1RR47 76 aa-0.38□□□□□ -2.47
SMCHD1-207ENST00000581711 ATOX1O00244 68 aa-0.38□□□□□ -2.47
SMCHD1-207ENST00000581711 DEFB112Q30KQ8 113 aa-0.38□□□□□ -2.47
SMCHD1-207ENST00000581711 PMCHL2Q9BQD1 86 aa-0.38□□□□□ -2.47
SMCHD1-207ENST00000581711 CDKN2A-AS1Q9UH64 79 aa-0.38□□□□□ -2.47
SMCHD1-207ENST00000581711 RAPGEF2Q9Y4G8 1499 aa-0.38□□□□□ -2.47
SMCHD1-207ENST00000581711 PKD1L3Q7Z443 1732 aa-0.38□□□□□ -2.47
SMCHD1-207ENST00000581711 CLIP1P30622 1438 aa-0.38□□□□□ -2.47
SMCHD1-207ENST00000581711 NCOA3Q9Y6Q9 1424 aa-0.38□□□□□ -2.47
SMCHD1-207ENST00000581711 SAMD9Q5K651 1589 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms