RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 CRYGAP11844 174 aa7.45□□□□□ -1.22
SNORD55-201ENST00000581525 LRP2P98164 4655 aa7.44□□□□□ -1.22
SNORD55-201ENST00000581525 KRTAP13-2Q52LG2 175 aa7.44□□□□□ -1.22
SNORD55-201ENST00000581525 PCP2Q8IVA1 136 aa7.44□□□□□ -1.22
SNORD55-201ENST00000581525 IFITM1P13164 125 aa7.43□□□□□ -1.22
SNORD55-201ENST00000581525 SMCR5Q8TEV8 140 aa7.43□□□□□ -1.22
SNORD55-201ENST00000581525 ETDCA0A1B0GVM5 59 aa7.42□□□□□ -1.22
SNORD55-201ENST00000581525 NPC2P61916 151 aa7.42□□□□□ -1.22
SNORD55-201ENST00000581525 LINC00518Q8N0U6 118 aa7.42□□□□□ -1.22
SNORD55-201ENST00000581525 SPRR4Q96PI1 79 aa7.42□□□□□ -1.22
SNORD55-201ENST00000581525 ANAPC11Q9NYG5 84 aa7.42□□□□□ -1.22
SNORD55-201ENST00000581525 S100A7L2Q5SY68 101 aa7.41□□□□□ -1.22
SNORD55-201ENST00000581525 SCGB1D4Q6XE38 83 aa7.41□□□□□ -1.22
SNORD55-201ENST00000581525 HIGD2AQ9BW72 106 aa7.41□□□□□ -1.22
SNORD55-201ENST00000581525 TRAV23DV6A0A075B6W5 121 aa7.4□□□□□ -1.22
SNORD55-201ENST00000581525 Q6ZRX8 168 aa7.4□□□□□ -1.22
SNORD55-201ENST00000581525 TYMSOSQ8TAI1 123 aa7.4□□□□□ -1.22
SNORD55-201ENST00000581525 COPS9Q8WXC6 57 aa7.4□□□□□ -1.22
SNORD55-201ENST00000581525 Q9BRP9 147 aa7.4□□□□□ -1.22
SNORD55-201ENST00000581525 UBR4Q5T4S7 5183 aa7.39□□□□□ -1.23
SNORD55-201ENST00000581525 ZNF73O43830 326 aaPredicted RBP7.39□□□□□ -1.23
SNORD55-201ENST00000581525 LINC00483Q53H64 154 aa7.39□□□□□ -1.23
SNORD55-201ENST00000581525 ZNF706Q9Y5V0 76 aaPredicted RBP7.39□□□□□ -1.23
SNORD55-201ENST00000581525 HSBP1L1C9JCN9 74 aa7.38□□□□□ -1.23
SNORD55-201ENST00000581525 ERC2-IT1O76042 136 aa7.37□□□□□ -1.23
SNORD55-201ENST00000581525 JOSD1Q15040 202 aaPredicted RBP7.37□□□□□ -1.23
SNORD55-201ENST00000581525 MUSTN1Q8IVN3 82 aa7.37□□□□□ -1.23
SNORD55-201ENST00000581525 SCGB1D1O95968 90 aa7.36□□□□□ -1.23
SNORD55-201ENST00000581525 TRBV7-6A0A0J9YX20 115 aa7.35□□□□□ -1.23
SNORD55-201ENST00000581525 DLEU1O43261 78 aa7.35□□□□□ -1.23
SNORD55-201ENST00000581525 C3orf22Q8N5N4 141 aa7.34□□□□□ -1.23
SNORD55-201ENST00000581525 OR13C6PQ8NH95 151 aa7.34□□□□□ -1.23
SNORD55-201ENST00000581525 LPAP08519 4548 aa7.34□□□□□ -1.23
SNORD55-201ENST00000581525 COX8AP10176 69 aa7.33□□□□□ -1.24
SNORD55-201ENST00000581525 HINT1P49773 126 aaPredicted RBP7.33□□□□□ -1.24
SNORD55-201ENST00000581525 ELOF1P60002 83 aaKnown RBP7.33□□□□□ -1.24
SNORD55-201ENST00000581525 LINC00304Q8N9R0 145 aa7.32□□□□□ -1.24
SNORD55-201ENST00000581525 TRAV13-2A0A0B4J235 113 aa7.31□□□□□ -1.24
SNORD55-201ENST00000581525 SPAG11AQ6PDA7 123 aa7.31□□□□□ -1.24
SNORD55-201ENST00000581525 DHRS4-AS1Q9P1J3 65 aa7.31□□□□□ -1.24
SNORD55-201ENST00000581525 SPRR1BP22528 89 aa7.3□□□□□ -1.24
SNORD55-201ENST00000581525 C6orf99Q4VX62 202 aa7.3□□□□□ -1.24
SNORD55-201ENST00000581525 SSBP3-AS1Q7Z2R9 100 aa7.3□□□□□ -1.24
SNORD55-201ENST00000581525 PCP4P48539 62 aa7.29□□□□□ -1.24
SNORD55-201ENST00000581525 GAGE2AQ6NT46 116 aa7.29□□□□□ -1.24
SNORD55-201ENST00000581525 PCP4L1A6NKN8 68 aa7.28□□□□□ -1.24
SNORD55-201ENST00000581525 COX7BP24311 80 aa7.28□□□□□ -1.24
SNORD55-201ENST00000581525 HIGD1BQ9P298 99 aa7.28□□□□□ -1.24
SNORD55-201ENST00000581525 A0A1B0GWB2 263 aa7.27□□□□□ -1.25
SNORD55-201ENST00000581525 A4D1N5 150 aa7.27□□□□□ -1.25
SNORD55-201ENST00000581525 A6NDN8 102 aa7.27□□□□□ -1.25
SNORD55-201ENST00000581525 TSPAN13O95857 204 aa7.27□□□□□ -1.25
SNORD55-201ENST00000581525 SPATA45Q537H7 98 aa7.26□□□□□ -1.25
SNORD55-201ENST00000581525 ST20-AS1Q8NBB2 130 aa7.26□□□□□ -1.25
SNORD55-201ENST00000581525 SMIM11BQ8TCY0 68 aa7.26□□□□□ -1.25
SNORD55-201ENST00000581525 PYY3Q5JQD4 70 aa7.25□□□□□ -1.25
SNORD55-201ENST00000581525 C14orf144Q96I85 54 aa7.25□□□□□ -1.25
SNORD55-201ENST00000581525 SPINK1P00995 79 aa7.24□□□□□ -1.25
SNORD55-201ENST00000581525 RPS29P62273 56 aaKnown RBP7.24□□□□□ -1.25
SNORD55-201ENST00000581525 VAMP8Q9BV40 100 aa7.24□□□□□ -1.25
SNORD55-201ENST00000581525 PAM16Q9Y3D7 125 aa7.24□□□□□ -1.25
SNORD55-201ENST00000581525 LINC01547P58512 204 aaPredicted RBP7.23□□□□□ -1.25
SNORD55-201ENST00000581525 SLC25A34Q6PIV7 304 aa7.23□□□□□ -1.25
SNORD55-201ENST00000581525 C2orf91Q6ZV80 131 aa7.23□□□□□ -1.25
SNORD55-201ENST00000581525 Q8NBF4 154 aa7.23□□□□□ -1.25
SNORD55-201ENST00000581525 HIST1H4GQ99525 98 aa7.23□□□□□ -1.25
SNORD55-201ENST00000581525 IGLV5-48A0A075B6I7 105 aa7.22□□□□□ -1.25
SNORD55-201ENST00000581525 PRR4Q16378 134 aa7.22□□□□□ -1.25
SNORD55-201ENST00000581525 TAL2Q16559 108 aa7.21□□□□□ -1.26
SNORD55-201ENST00000581525 C12orf57Q99622 126 aa7.21□□□□□ -1.26
SNORD55-201ENST00000581525 IGLV9-49A0A0B4J1Y8 123 aa7.2□□□□□ -1.26
SNORD55-201ENST00000581525 TEX49A0A1B0GTD5 131 aa7.2□□□□□ -1.26
SNORD55-201ENST00000581525 SMIM6P0DI80 62 aa7.2□□□□□ -1.26
SNORD55-201ENST00000581525 MOBPQ13875 183 aa7.2□□□□□ -1.26
SNORD55-201ENST00000581525 C4orf48Q5BLP8 95 aa7.2□□□□□ -1.26
SNORD55-201ENST00000581525 CFC1BP0CG36 223 aa7.19□□□□□ -1.26
SNORD55-201ENST00000581525 CFC1P0CG37 223 aa7.19□□□□□ -1.26
SNORD55-201ENST00000581525 VAMP3Q15836 100 aa7.19□□□□□ -1.26
SNORD55-201ENST00000581525 LINC00575Q6W349 94 aa7.19□□□□□ -1.26
SNORD55-201ENST00000581525 SMIM29Q86T20 159 aa7.19□□□□□ -1.26
SNORD55-201ENST00000581525 NHP2Q9NX24 153 aaKnown RBP7.19□□□□□ -1.26
SNORD55-201ENST00000581525 RNF213Q63HN8 5207 aa7.18□□□□□ -1.26
SNORD55-201ENST00000581525 LAMTOR3Q9UHA4 124 aa7.18□□□□□ -1.26
SNORD55-201ENST00000581525 A0A0B4J2C4 111 aa7.17□□□□□ -1.26
SNORD55-201ENST00000581525 TPRXLQ17RH7 258 aa7.17□□□□□ -1.26
SNORD55-201ENST00000581525 FP248Q71RG6 208 aaPredicted RBP7.17□□□□□ -1.26
SNORD55-201ENST00000581525 CEND1Q8N111 149 aa7.17□□□□□ -1.26
SNORD55-201ENST00000581525 Q8N377 158 aa7.16□□□□□ -1.26
SNORD55-201ENST00000581525 RETNLBQ9BQ08 111 aa7.16□□□□□ -1.26
SNORD55-201ENST00000581525 BVES-AS1Q5T3Y7 98 aa7.15□□□□□ -1.26
SNORD55-201ENST00000581525 IGLV7-46A0A075B6I9 117 aa7.14□□□□□ -1.27
SNORD55-201ENST00000581525 hADV29S1A0JD25 119 aa7.14□□□□□ -1.27
SNORD55-201ENST00000581525 CD164Q04900 197 aa7.14□□□□□ -1.27
SNORD55-201ENST00000581525 SLC25A20O43772 301 aa7.13□□□□□ -1.27
SNORD55-201ENST00000581525 C9orf153Q5TBE3 101 aa7.13□□□□□ -1.27
SNORD55-201ENST00000581525 DEFB105AQ8NG35 78 aa7.13□□□□□ -1.27
SNORD55-201ENST00000581525 MUC17Q685J3 4493 aa7.12□□□□□ -1.27
SNORD55-201ENST00000581525 FXYD2P54710 66 aa7.11□□□□□ -1.27
SNORD55-201ENST00000581525 Q5XG85 94 aa7.11□□□□□ -1.27
SNORD55-201ENST00000581525 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms