RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 NCR3O14931 201 aa9.68□□□□□ -0.86
SS18-216ENST00000580751 MRPL55Q7Z7F7 128 aaKnown RBP9.68□□□□□ -0.86
SS18-216ENST00000580751 OR13C6PQ8NH95 151 aa9.68□□□□□ -0.86
SS18-216ENST00000580751 C9orf118A6NHY6 69 aa9.67□□□□□ -0.86
SS18-216ENST00000580751 RPL28P46779 137 aaKnown RBP9.66□□□□□ -0.86
SS18-216ENST00000580751 TSPAN13O95857 204 aa9.65□□□□□ -0.86
SS18-216ENST00000580751 COX6CP09669 75 aa9.65□□□□□ -0.86
SS18-216ENST00000580751 UBE2BP63146 152 aa9.65□□□□□ -0.86
SS18-216ENST00000580751 Q1RN00 199 aa9.65□□□□□ -0.86
SS18-216ENST00000580751 LYRM7Q5U5X0 104 aa9.65□□□□□ -0.86
SS18-216ENST00000580751 KCNQ1DNQ9H478 68 aa9.65□□□□□ -0.86
SS18-216ENST00000580751 VPS13BQ7Z7G8 4022 aa9.65□□□□□ -0.87
SS18-216ENST00000580751 IGLV1-50A0A075B6I6 118 aa9.64□□□□□ -0.87
SS18-216ENST00000580751 TRBV10-3A0A0K0K1G6 114 aa9.64□□□□□ -0.87
SS18-216ENST00000580751 SMIM11BQ8TCY0 68 aa9.63□□□□□ -0.87
SS18-216ENST00000580751 LINC00167Q96N53 147 aa9.63□□□□□ -0.87
SS18-216ENST00000580751 KRTAP4-5Q9BYR2 181 aa9.63□□□□□ -0.87
SS18-216ENST00000580751 TRAV23DV6A0A075B6W5 121 aa9.62□□□□□ -0.87
SS18-216ENST00000580751 TRBV7-6A0A0J9YX20 115 aa9.62□□□□□ -0.87
SS18-216ENST00000580751 PRYO14603 147 aa9.62□□□□□ -0.87
SS18-216ENST00000580751 KRTAP10-4P60372 401 aaPredicted RBP9.62□□□□□ -0.87
SS18-216ENST00000580751 VAMP3Q15836 100 aa9.62□□□□□ -0.87
SS18-216ENST00000580751 ABCA13Q86UQ4 5058 aa9.61□□□□□ -0.87
SS18-216ENST00000580751 H0YGX0 51 aa9.61□□□□□ -0.87
SS18-216ENST00000580751 H7C2G1 150 aa9.61□□□□□ -0.87
SS18-216ENST00000580751 PSMB2P49721 201 aa9.61□□□□□ -0.87
SS18-216ENST00000580751 PSORS1C2Q9UIG4 136 aa9.61□□□□□ -0.87
SS18-216ENST00000580751 H3BUT2 72 aa9.6□□□□□ -0.87
SS18-216ENST00000580751 A0A1W2PPM0 123 aa9.59□□□□□ -0.87
SS18-216ENST00000580751 GAGE10A6NGK3 116 aa9.59□□□□□ -0.87
SS18-216ENST00000580751 ZNF73O43830 326 aaPredicted RBP9.59□□□□□ -0.87
SS18-216ENST00000580751 FABP2P12104 132 aa9.59□□□□□ -0.87
SS18-216ENST00000580751 SPRR1AP35321 89 aa9.59□□□□□ -0.87
SS18-216ENST00000580751 DIRC1Q969H9 104 aa9.59□□□□□ -0.87
SS18-216ENST00000580751 TRBV20-1A0A075B6N2 111 aa9.58□□□□□ -0.88
SS18-216ENST00000580751 TRIAP1O43715 76 aa9.58□□□□□ -0.88
SS18-216ENST00000580751 KRTAP11-1Q8IUC1 163 aa9.58□□□□□ -0.88
SS18-216ENST00000580751 INAFM2P0DMQ5 153 aa9.57□□□□□ -0.88
SS18-216ENST00000580751 C6orf99Q4VX62 202 aa9.57□□□□□ -0.88
SS18-216ENST00000580751 C1orf137Q5JT78 98 aa9.57□□□□□ -0.88
SS18-216ENST00000580751 RPL37AP8A6NKH3 93 aa9.56□□□□□ -0.88
SS18-216ENST00000580751 SCGB1C2P0DMR2 95 aa9.56□□□□□ -0.88
SS18-216ENST00000580751 A0A1B0GX51 115 aa9.55□□□□□ -0.88
SS18-216ENST00000580751 SNCGO76070 127 aa9.55□□□□□ -0.88
SS18-216ENST00000580751 REG3GQ6UW15 175 aa9.55□□□□□ -0.88
SS18-216ENST00000580751 FLG2Q5D862 2391 aaPredicted RBP9.54□□□□□ -0.88
SS18-216ENST00000580751 KRTAP4-16G5E9R7 235 aaPredicted RBP9.53□□□□□ -0.88
SS18-216ENST00000580751 ELOF1P60002 83 aaKnown RBP9.53□□□□□ -0.88
SS18-216ENST00000580751 H0Y9J4 135 aa9.52□□□□□ -0.89
SS18-216ENST00000580751 IGLV7-43P04211 117 aa9.52□□□□□ -0.89
SS18-216ENST00000580751 COX7BP24311 80 aa9.52□□□□□ -0.89
SS18-216ENST00000580751 ETDCA0A1B0GVM5 59 aa9.51□□□□□ -0.89
SS18-216ENST00000580751 NAA38Q9BRA0 125 aaKnown RBP9.51□□□□□ -0.89
SS18-216ENST00000580751 PCLOQ9Y6V0 5065 aa9.51□□□□□ -0.89
SS18-216ENST00000580751 BCE1O60756 84 aa9.5□□□□□ -0.89
SS18-216ENST00000580751 ATXN8Q156A1 80 aa9.5□□□□□ -0.89
SS18-216ENST00000580751 SPINK6Q6UWN8 80 aa9.5□□□□□ -0.89
SS18-216ENST00000580751 GTF2H5Q6ZYL4 71 aa9.5□□□□□ -0.89
SS18-216ENST00000580751 SPCS1Q9Y6A9 102 aa9.5□□□□□ -0.89
SS18-216ENST00000580751 B5MCH6 92 aa9.49□□□□□ -0.89
SS18-216ENST00000580751 LST1O00453 97 aa9.49□□□□□ -0.89
SS18-216ENST00000580751 SLC25A20O43772 301 aa9.49□□□□□ -0.89
SS18-216ENST00000580751 TRACP01848 142 aa9.49□□□□□ -0.89
SS18-216ENST00000580751 Q6ZRX8 168 aa9.49□□□□□ -0.89
SS18-216ENST00000580751 DHRS4-AS1Q9P1J3 65 aa9.49□□□□□ -0.89
SS18-216ENST00000580751 MYCBP2O75592 4640 aa9.48□□□□□ -0.89
SS18-216ENST00000580751 K7EP34 96 aa9.48□□□□□ -0.89
SS18-216ENST00000580751 LINC00575Q6W349 94 aa9.48□□□□□ -0.89
SS18-216ENST00000580751 ZNF861PO60384 105 aa9.46□□□□□ -0.9
SS18-216ENST00000580751 TCL1BO95988 128 aa9.46□□□□□ -0.9
SS18-216ENST00000580751 GHRHP01286 108 aa9.46□□□□□ -0.9
SS18-216ENST00000580751 hADV29S1A0JD25 119 aa9.45□□□□□ -0.9
SS18-216ENST00000580751 H3BQ85 93 aa9.45□□□□□ -0.9
SS18-216ENST00000580751 UBE2AP49459 152 aa9.45□□□□□ -0.9
SS18-216ENST00000580751 PKHD1L1Q86WI1 4243 aa9.45□□□□□ -0.9
SS18-216ENST00000580751 A0A1B0GV90 55 aa9.44□□□□□ -0.9
SS18-216ENST00000580751 FAM19A1Q7Z5A9 133 aa9.44□□□□□ -0.9
SS18-216ENST00000580751 CLEC2BQ92478 149 aa9.44□□□□□ -0.9
SS18-216ENST00000580751 DNAL4O96015 105 aa9.43□□□□□ -0.9
SS18-216ENST00000580751 OCIAD2Q56VL3 154 aa9.43□□□□□ -0.9
SS18-216ENST00000580751 KRTAP13-1Q8IUC0 172 aa9.43□□□□□ -0.9
SS18-216ENST00000580751 FAM218AQ96MZ4 157 aa9.43□□□□□ -0.9
SS18-216ENST00000580751 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.42□□□□□ -0.9
SS18-216ENST00000580751 DMBT1Q9UGM3 2413 aaPredicted RBP9.41□□□□□ -0.9
SS18-216ENST00000580751 UBE2V1Q13404 147 aa9.41□□□□□ -0.9
SS18-216ENST00000580751 H3BMG7 143 aa9.4□□□□□ -0.9
SS18-216ENST00000580751 PRLHP81277 87 aa9.4□□□□□ -0.9
SS18-216ENST00000580751 OXTP01178 125 aa9.39□□□□□ -0.91
SS18-216ENST00000580751 PPDPFLQ8WWR9 84 aa9.39□□□□□ -0.91
SS18-216ENST00000580751 Q9BRP9 147 aa9.39□□□□□ -0.91
SS18-216ENST00000580751 SMCR5Q8TEV8 140 aa9.38□□□□□ -0.91
SS18-216ENST00000580751 LINC01600Q96MT4 127 aa9.38□□□□□ -0.91
SS18-216ENST00000580751 LRP1Q07954 4544 aaKnown RBP9.38□□□□□ -0.91
SS18-216ENST00000580751 KRTAP29-1A8MX34 341 aaPredicted RBP9.37□□□□□ -0.91
SS18-216ENST00000580751 F8W1H4 67 aa9.37□□□□□ -0.91
SS18-216ENST00000580751 H3BT86 120 aa9.36□□□□□ -0.91
SS18-216ENST00000580751 ORMDL1Q9P0S3 153 aa9.36□□□□□ -0.91
SS18-216ENST00000580751 C9JAW5 83 aa9.35□□□□□ -0.91
SS18-216ENST00000580751 TMEM256-PLSCR3K7ERE1 68 aa9.35□□□□□ -0.91
SS18-216ENST00000580751 Q6ZQY7 126 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms