RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 PSORS1C2Q9UIG4 136 aa11.71□□□□□ -0.53
LIMD2-209ENST00000580222 UQCR10Q9UDW1 63 aa11.7□□□□□ -0.54
LIMD2-209ENST00000580222 C1orf137Q5JT78 98 aa11.69□□□□□ -0.54
LIMD2-209ENST00000580222 IGLV1-50A0A075B6I6 118 aa11.68□□□□□ -0.54
LIMD2-209ENST00000580222 S100A7L2Q5SY68 101 aa11.68□□□□□ -0.54
LIMD2-209ENST00000580222 C12orf57Q99622 126 aa11.68□□□□□ -0.54
LIMD2-209ENST00000580222 DDTP30046 118 aa11.67□□□□□ -0.54
LIMD2-209ENST00000580222 PRO1933Q9H354 126 aa11.67□□□□□ -0.54
LIMD2-209ENST00000580222 TRBV10-3A0A0K0K1G6 114 aa11.66□□□□□ -0.54
LIMD2-209ENST00000580222 LINC00518Q8N0U6 118 aa11.66□□□□□ -0.54
LIMD2-209ENST00000580222 OR13C6PQ8NH95 151 aa11.65□□□□□ -0.54
LIMD2-209ENST00000580222 FSIP2Q5CZC0 6907 aa11.65□□□□□ -0.55
LIMD2-209ENST00000580222 PRR4Q16378 134 aa11.64□□□□□ -0.55
LIMD2-209ENST00000580222 A4D1N5 150 aa11.63□□□□□ -0.55
LIMD2-209ENST00000580222 PRYO14603 147 aa11.63□□□□□ -0.55
LIMD2-209ENST00000580222 TAL2Q16559 108 aa11.63□□□□□ -0.55
LIMD2-209ENST00000580222 IGLV6-57P01721 117 aa11.62□□□□□ -0.55
LIMD2-209ENST00000580222 LINC00337Q8N6G1 96 aa11.62□□□□□ -0.55
LIMD2-209ENST00000580222 TMEM126AQ9H061 195 aa11.62□□□□□ -0.55
LIMD2-209ENST00000580222 BCE1O60756 84 aa11.61□□□□□ -0.55
LIMD2-209ENST00000580222 IGLV7-43P04211 117 aa11.6□□□□□ -0.55
LIMD2-209ENST00000580222 HSD52Q0P140 79 aa11.6□□□□□ -0.55
LIMD2-209ENST00000580222 KCNQ1DNQ9H478 68 aa11.6□□□□□ -0.55
LIMD2-209ENST00000580222 TRAV23DV6A0A075B6W5 121 aa11.59□□□□□ -0.55
LIMD2-209ENST00000580222 A6NDN8 102 aa11.59□□□□□ -0.55
LIMD2-209ENST00000580222 TSTD3H0UI37 97 aa11.59□□□□□ -0.55
LIMD2-209ENST00000580222 CEND1Q8N111 149 aa11.59□□□□□ -0.55
LIMD2-209ENST00000580222 CBY1Q9Y3M2 126 aa11.59□□□□□ -0.55
LIMD2-209ENST00000580222 TRAV13-2A0A0B4J235 113 aa11.58□□□□□ -0.56
LIMD2-209ENST00000580222 UBE2AP49459 152 aa11.58□□□□□ -0.56
LIMD2-209ENST00000580222 FAM19A1Q7Z5A9 133 aa11.58□□□□□ -0.56
LIMD2-209ENST00000580222 TMEM238LA0A1B0GVL6 79 aa11.56□□□□□ -0.56
LIMD2-209ENST00000580222 A6NJY4 79 aa11.56□□□□□ -0.56
LIMD2-209ENST00000580222 MUC17Q685J3 4493 aa11.55□□□□□ -0.56
LIMD2-209ENST00000580222 ETDCA0A1B0GVM5 59 aa11.55□□□□□ -0.56
LIMD2-209ENST00000580222 SPRR1AP35321 89 aa11.54□□□□□ -0.56
LIMD2-209ENST00000580222 RPL28P46779 137 aaKnown RBP11.54□□□□□ -0.56
LIMD2-209ENST00000580222 FXYD2P54710 66 aa11.54□□□□□ -0.56
LIMD2-209ENST00000580222 PRLHP81277 87 aa11.54□□□□□ -0.56
LIMD2-209ENST00000580222 ZNF73O43830 326 aaPredicted RBP11.53□□□□□ -0.56
LIMD2-209ENST00000580222 ZNF861PO60384 105 aa11.52□□□□□ -0.57
LIMD2-209ENST00000580222 RPL13AP40429 203 aaKnown RBP11.52□□□□□ -0.57
LIMD2-209ENST00000580222 DIRC1Q969H9 104 aa11.52□□□□□ -0.57
LIMD2-209ENST00000580222 RAB37Q96AX2 223 aa11.52□□□□□ -0.57
LIMD2-209ENST00000580222 KRTAP1-4P0C5Y4 121 aa11.51□□□□□ -0.57
LIMD2-209ENST00000580222 A0A0B4J2C4 111 aa11.5□□□□□ -0.57
LIMD2-209ENST00000580222 CFC1BP0CG36 223 aa11.5□□□□□ -0.57
LIMD2-209ENST00000580222 CFC1P0CG37 223 aa11.5□□□□□ -0.57
LIMD2-209ENST00000580222 HINT1P49773 126 aaPredicted RBP11.5□□□□□ -0.57
LIMD2-209ENST00000580222 KRTAP4-16G5E9R7 235 aaPredicted RBP11.49□□□□□ -0.57
LIMD2-209ENST00000580222 KRTAP13-1Q8IUC0 172 aa11.49□□□□□ -0.57
LIMD2-209ENST00000580222 CTAG1AP78358 180 aa11.48□□□□□ -0.57
LIMD2-209ENST00000580222 C6orf99Q4VX62 202 aa11.48□□□□□ -0.57
LIMD2-209ENST00000580222 NHP2Q9NX24 153 aaKnown RBP11.48□□□□□ -0.57
LIMD2-209ENST00000580222 B5MCH6 92 aa11.47□□□□□ -0.57
LIMD2-209ENST00000580222 H0Y9J4 135 aa11.47□□□□□ -0.57
LIMD2-209ENST00000580222 SMIM11BQ8TCY0 68 aa11.47□□□□□ -0.57
LIMD2-209ENST00000580222 HIGD2AQ9BW72 106 aa11.47□□□□□ -0.57
LIMD2-209ENST00000580222 H7C2G1 150 aa11.45□□□□□ -0.58
LIMD2-209ENST00000580222 BVES-AS1Q5T3Y7 98 aa11.45□□□□□ -0.58
LIMD2-209ENST00000580222 Q6ZRX8 168 aa11.45□□□□□ -0.58
LIMD2-209ENST00000580222 CRCT1Q9UGL9 99 aa11.45□□□□□ -0.58
LIMD2-209ENST00000580222 M0R143 59 aa11.44□□□□□ -0.58
LIMD2-209ENST00000580222 COX7BP24311 80 aa11.44□□□□□ -0.58
LIMD2-209ENST00000580222 Q1RN00 199 aa11.43□□□□□ -0.58
LIMD2-209ENST00000580222 PRO1854Q9UHT4 67 aa11.43□□□□□ -0.58
LIMD2-209ENST00000580222 ELOF1P60002 83 aaKnown RBP11.42□□□□□ -0.58
LIMD2-209ENST00000580222 A0A1B0GWB2 263 aa11.41□□□□□ -0.58
LIMD2-209ENST00000580222 K7ERJ3 54 aa11.41□□□□□ -0.58
LIMD2-209ENST00000580222 LCE2DQ5TA82 110 aaPredicted RBP11.41□□□□□ -0.58
LIMD2-209ENST00000580222 TRBV7-6A0A0J9YX20 115 aa11.4□□□□□ -0.58
LIMD2-209ENST00000580222 TSPAN13O95857 204 aa11.4□□□□□ -0.58
LIMD2-209ENST00000580222 SMCR5Q8TEV8 140 aa11.4□□□□□ -0.58
LIMD2-209ENST00000580222 Q9BRP9 147 aa11.39□□□□□ -0.59
LIMD2-209ENST00000580222 VAMP3Q15836 100 aa11.38□□□□□ -0.59
LIMD2-209ENST00000580222 DHRS4-AS1Q9P1J3 65 aa11.37□□□□□ -0.59
LIMD2-209ENST00000580222 BATFQ16520 125 aa11.35□□□□□ -0.59
LIMD2-209ENST00000580222 ZNF706Q9Y5V0 76 aaPredicted RBP11.35□□□□□ -0.59
LIMD2-209ENST00000580222 ERC2-IT1O76042 136 aa11.34□□□□□ -0.59
LIMD2-209ENST00000580222 PSMB2P49721 201 aa11.31□□□□□ -0.6
LIMD2-209ENST00000580222 SPRR4Q96PI1 79 aa11.31□□□□□ -0.6
LIMD2-209ENST00000580222 SLC25A20O43772 301 aa11.3□□□□□ -0.6
LIMD2-209ENST00000580222 TRIAP1O43715 76 aa11.29□□□□□ -0.6
LIMD2-209ENST00000580222 LINC00575Q6W349 94 aa11.28□□□□□ -0.6
LIMD2-209ENST00000580222 ANAPC11Q9NYG5 84 aa11.28□□□□□ -0.6
LIMD2-209ENST00000580222 H0YGX0 51 aa11.27□□□□□ -0.61
LIMD2-209ENST00000580222 GAGE2AQ6NT46 116 aa11.27□□□□□ -0.61
LIMD2-209ENST00000580222 ST20-AS1Q8NBB2 130 aa11.27□□□□□ -0.61
LIMD2-209ENST00000580222 PCP4L1A6NKN8 68 aa11.26□□□□□ -0.61
LIMD2-209ENST00000580222 hADV29S1A0JD25 119 aa11.25□□□□□ -0.61
LIMD2-209ENST00000580222 COX6CP09669 75 aa11.25□□□□□ -0.61
LIMD2-209ENST00000580222 FAM229BQ4G0N7 80 aa11.24□□□□□ -0.61
LIMD2-209ENST00000580222 RETNLBQ9BQ08 111 aa11.24□□□□□ -0.61
LIMD2-209ENST00000580222 CRYGAP11844 174 aa11.23□□□□□ -0.61
LIMD2-209ENST00000580222 A0A087X002 238 aa11.22□□□□□ -0.61
LIMD2-209ENST00000580222 SNCGO76070 127 aa11.22□□□□□ -0.61
LIMD2-209ENST00000580222 LINC00483Q53H64 154 aa11.22□□□□□ -0.61
LIMD2-209ENST00000580222 DEFB105AQ8NG35 78 aa11.21□□□□□ -0.61
LIMD2-209ENST00000580222 FAM218AQ96MZ4 157 aa11.21□□□□□ -0.61
LIMD2-209ENST00000580222 SCGB1C2P0DMR2 95 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms