RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 RPL39LQ96EH5 51 aaKnown RBP3.3□□□□□ -1.88
COPS3-216ENST00000579716 USMG5Q96IX5 58 aa3.3□□□□□ -1.88
COPS3-216ENST00000579716 ANKRD17O75179 2603 aaKnown RBP3.29□□□□□ -1.88
COPS3-216ENST00000579716 SPINK9Q5DT21 86 aa3.29□□□□□ -1.88
COPS3-216ENST00000579716 RTTNQ86VV8 2226 aa3.28□□□□□ -1.88
COPS3-216ENST00000579716 IGFL1Q6UW32 110 aa3.28□□□□□ -1.88
COPS3-216ENST00000579716 MRPL34Q9BQ48 92 aaKnown RBP3.28□□□□□ -1.88
COPS3-216ENST00000579716 TECTAO75443 2155 aa3.28□□□□□ -1.88
COPS3-216ENST00000579716 RPS27P42677 84 aaKnown RBP3.27□□□□□ -1.89
COPS3-216ENST00000579716 PIGYQ3MUY2 71 aa3.27□□□□□ -1.89
COPS3-216ENST00000579716 BPTFQ12830 3046 aa3.27□□□□□ -1.89
COPS3-216ENST00000579716 CCL22O00626 93 aa3.26□□□□□ -1.89
COPS3-216ENST00000579716 RPL37P61927 97 aaKnown RBP3.26□□□□□ -1.89
COPS3-216ENST00000579716 PCOTHQ58A44 107 aa3.26□□□□□ -1.89
COPS3-216ENST00000579716 IGLV5-48A0A075B6I7 105 aa3.25□□□□□ -1.89
COPS3-216ENST00000579716 I3L2K1 104 aa3.24□□□□□ -1.89
COPS3-216ENST00000579716 SHANK1Q9Y566 2161 aa3.24□□□□□ -1.89
COPS3-216ENST00000579716 ABCA1O95477 2261 aa3.23□□□□□ -1.89
COPS3-216ENST00000579716 WFDC13Q8IUB5 93 aa3.23□□□□□ -1.89
COPS3-216ENST00000579716 URB1O60287 2271 aaKnown RBP3.23□□□□□ -1.89
COPS3-216ENST00000579716 WFDC10BQ8IUB3 73 aa3.22□□□□□ -1.89
COPS3-216ENST00000579716 FN1P02751 2386 aaKnown RBP3.22□□□□□ -1.89
COPS3-216ENST00000579716 CADP27708 2225 aa3.21□□□□□ -1.9
COPS3-216ENST00000579716 KNTC1P50748 2209 aa3.21□□□□□ -1.9
COPS3-216ENST00000579716 H0YAA0 97 aa3.2□□□□□ -1.9
COPS3-216ENST00000579716 UNQ6190/PRO20217Q6UXQ8 127 aa3.2□□□□□ -1.9
COPS3-216ENST00000579716 SORL1Q92673 2214 aa3.19□□□□□ -1.9
COPS3-216ENST00000579716 DEFB123Q8N688 67 aa3.18□□□□□ -1.9
COPS3-216ENST00000579716 LEAP2Q969E1 77 aa3.17□□□□□ -1.9
COPS3-216ENST00000579716 GPR179Q6PRD1 2367 aa3.17□□□□□ -1.9
COPS3-216ENST00000579716 PDE4DIPQ5VU43 2346 aa3.16□□□□□ -1.9
COPS3-216ENST00000579716 LYNX1P0DP58 116 aa3.16□□□□□ -1.9
COPS3-216ENST00000579716 M0QY20 66 aa3.15□□□□□ -1.91
COPS3-216ENST00000579716 KRTAP1-4P0C5Y4 121 aa3.15□□□□□ -1.91
COPS3-216ENST00000579716 DEFB131AP59861 70 aa3.15□□□□□ -1.91
COPS3-216ENST00000579716 ASXL3Q9C0F0 2248 aa3.13□□□□□ -1.91
COPS3-216ENST00000579716 CACNA1EQ15878 2313 aa3.13□□□□□ -1.91
COPS3-216ENST00000579716 DEFB106AQ8N104 65 aa3.12□□□□□ -1.91
COPS3-216ENST00000579716 CNOT1A5YKK6 2376 aaKnown RBP3.11□□□□□ -1.91
COPS3-216ENST00000579716 H1FX-AS1Q4G0G2 97 aa3.11□□□□□ -1.91
COPS3-216ENST00000579716 Q6ZSA8 131 aa3.11□□□□□ -1.91
COPS3-216ENST00000579716 KAAG1Q9UBP8 84 aa3.11□□□□□ -1.91
COPS3-216ENST00000579716 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.1□□□□□ -1.91
COPS3-216ENST00000579716 PTPRQQ9UMZ3 2332 aa3.09□□□□□ -1.91
COPS3-216ENST00000579716 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
COPS3-216ENST00000579716 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
COPS3-216ENST00000579716 COX6A2Q02221 97 aa3.08□□□□□ -1.92
COPS3-216ENST00000579716 BRD3OSQ6XYD6 125 aa3.08□□□□□ -1.92
COPS3-216ENST00000579716 TMEM167AQ8TBQ9 72 aa3.08□□□□□ -1.92
COPS3-216ENST00000579716 ATRXP46100 2492 aa3.08□□□□□ -1.92
COPS3-216ENST00000579716 MMP24-AS1A0A0U1RRL7 71 aa3.07□□□□□ -1.92
COPS3-216ENST00000579716 C10orf95Q9H7T3 257 aa3.06□□□□□ -1.92
COPS3-216ENST00000579716 AHCTF1Q8WYP5 2266 aa3.05□□□□□ -1.92
COPS3-216ENST00000579716 DEFB130BP0DP73 79 aa3.04□□□□□ -1.92
COPS3-216ENST00000579716 DEFB130AP0DP74 79 aa3.04□□□□□ -1.92
COPS3-216ENST00000579716 KRTAP10-1P60331 282 aa3.03□□□□□ -1.92
COPS3-216ENST00000579716 KRTAP13-4Q3LI77 160 aa3.03□□□□□ -1.92
COPS3-216ENST00000579716 DOPEY2Q9Y3R5 2298 aa3.02□□□□□ -1.93
COPS3-216ENST00000579716 H3BUA1 57 aa3.02□□□□□ -1.93
COPS3-216ENST00000579716 WT1-ASQ06250 92 aa3.02□□□□□ -1.93
COPS3-216ENST00000579716 TOMM7Q9P0U1 55 aa3.02□□□□□ -1.93
COPS3-216ENST00000579716 ALMS1Q8TCU4 4167 aa3.01□□□□□ -1.93
COPS3-216ENST00000579716 LELP1Q5T871 98 aa3□□□□□ -1.93
COPS3-216ENST00000579716 KNL1Q8NG31 2342 aa3□□□□□ -1.93
COPS3-216ENST00000579716 ASCC3Q8N3C0 2202 aaKnown RBP3□□□□□ -1.93
COPS3-216ENST00000579716 K7EIM0 57 aa2.99□□□□□ -1.93
COPS3-216ENST00000579716 DEFB103AP81534 67 aa2.99□□□□□ -1.93
COPS3-216ENST00000579716 DEFB109BQ30KR1 87 aa2.98□□□□□ -1.93
COPS3-216ENST00000579716 ICE1Q9Y2F5 2266 aa2.98□□□□□ -1.93
COPS3-216ENST00000579716 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
COPS3-216ENST00000579716 RPL39P5Q59GN2 51 aa2.97□□□□□ -1.93
COPS3-216ENST00000579716 K7EIL1 84 aa2.96□□□□□ -1.94
COPS3-216ENST00000579716 PRO0255Q9UI72 69 aa2.96□□□□□ -1.94
COPS3-216ENST00000579716 TRIOBPQ9H2D6 2365 aa2.96□□□□□ -1.94
COPS3-216ENST00000579716 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
COPS3-216ENST00000579716 APLNQ9ULZ1 77 aa2.94□□□□□ -1.94
COPS3-216ENST00000579716 A8MTW9 85 aa2.93□□□□□ -1.94
COPS3-216ENST00000579716 DEFB105AQ8NG35 78 aa2.92□□□□□ -1.94
COPS3-216ENST00000579716 UNC79Q9P2D8 2635 aa2.92□□□□□ -1.94
COPS3-216ENST00000579716 FAM208BQ5VWN6 2430 aa2.92□□□□□ -1.94
COPS3-216ENST00000579716 CACNA1BQ00975 2339 aa2.92□□□□□ -1.94
COPS3-216ENST00000579716 USF3Q68DE3 2245 aa2.91□□□□□ -1.94
COPS3-216ENST00000579716 SPRR1AP35321 89 aa2.91□□□□□ -1.94
COPS3-216ENST00000579716 Q5VSD8 79 aa2.91□□□□□ -1.94
COPS3-216ENST00000579716 CLPSL2Q6UWE3 100 aa2.91□□□□□ -1.94
COPS3-216ENST00000579716 DEFB104AQ8WTQ1 72 aa2.91□□□□□ -1.94
COPS3-216ENST00000579716 DEFB108AA8MXU0 73 aa2.9□□□□□ -1.95
COPS3-216ENST00000579716 COL6A6A6NMZ7 2263 aa2.89□□□□□ -1.95
COPS3-216ENST00000579716 PRLHP81277 87 aa2.88□□□□□ -1.95
COPS3-216ENST00000579716 FLG2Q5D862 2391 aaPredicted RBP2.88□□□□□ -1.95
COPS3-216ENST00000579716 PLCE1Q9P212 2302 aa2.87□□□□□ -1.95
COPS3-216ENST00000579716 TPRP12270 2363 aaKnown RBP2.86□□□□□ -1.95
COPS3-216ENST00000579716 WNK2Q9Y3S1 2297 aa2.86□□□□□ -1.95
COPS3-216ENST00000579716 PIEZO2Q9H5I5 2752 aa2.84□□□□□ -1.95
COPS3-216ENST00000579716 OTOGLQ3ZCN5 2332 aa2.84□□□□□ -1.95
COPS3-216ENST00000579716 CACNA1GO43497 2377 aa2.83□□□□□ -1.96
COPS3-216ENST00000579716 NAV3Q8IVL0 2385 aa2.83□□□□□ -1.96
COPS3-216ENST00000579716 CNTRLQ7Z7A1 2325 aa2.83□□□□□ -1.96
COPS3-216ENST00000579716 JMJD1CQ15652 2540 aa2.81□□□□□ -1.96
COPS3-216ENST00000579716 S4R3F8 94 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms