RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 SACSQ9NZJ4 4579 aa2.28□□□□□ -2.04
GAPLINC-201ENST00000578664 CSMD3Q7Z407 3707 aa2.28□□□□□ -2.05
GAPLINC-201ENST00000578664 PLCE1Q9P212 2302 aa2.28□□□□□ -2.05
GAPLINC-201ENST00000578664 C7orf77A4D0Y5 90 aa2.27□□□□□ -2.05
GAPLINC-201ENST00000578664 IGHV3-30P01768 117 aa2.27□□□□□ -2.05
GAPLINC-201ENST00000578664 SFTA3P0C7M3 94 aa2.27□□□□□ -2.05
GAPLINC-201ENST00000578664 IGHV3-30-5P0DP03 117 aa2.27□□□□□ -2.05
GAPLINC-201ENST00000578664 RNASE3P12724 160 aaKnown RBP2.27□□□□□ -2.05
GAPLINC-201ENST00000578664 FXYD4P59646 89 aa2.27□□□□□ -2.05
GAPLINC-201ENST00000578664 DEFA5Q01523 94 aa2.27□□□□□ -2.05
GAPLINC-201ENST00000578664 TDRG1Q3Y452 100 aa2.27□□□□□ -2.05
GAPLINC-201ENST00000578664 FAM213BQ8TBF2 198 aa2.27□□□□□ -2.05
GAPLINC-201ENST00000578664 MANBALQ9NQG1 85 aa2.27□□□□□ -2.05
GAPLINC-201ENST00000578664 PSENENQ9NZ42 101 aa2.27□□□□□ -2.05
GAPLINC-201ENST00000578664 EPPK1P58107 5090 aaKnown RBP2.27□□□□□ -2.05
GAPLINC-201ENST00000578664 MUC4Q99102 2169 aa2.26□□□□□ -2.05
GAPLINC-201ENST00000578664 CTXND1A0A1B0GTU2 59 aa2.26□□□□□ -2.05
GAPLINC-201ENST00000578664 H3BRN7 92 aa2.26□□□□□ -2.05
GAPLINC-201ENST00000578664 SYS1-DBNDD2H3BUS1 97 aa2.26□□□□□ -2.05
GAPLINC-201ENST00000578664 PRH1P02810 166 aa2.26□□□□□ -2.05
GAPLINC-201ENST00000578664 RNASE2P10153 161 aaKnown RBP2.26□□□□□ -2.05
GAPLINC-201ENST00000578664 UBE2D3P61077 147 aa2.26□□□□□ -2.05
GAPLINC-201ENST00000578664 UBE2D2P62837 147 aa2.26□□□□□ -2.05
GAPLINC-201ENST00000578664 KLK9Q2XQG4 91 aa2.26□□□□□ -2.05
GAPLINC-201ENST00000578664 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
GAPLINC-201ENST00000578664 HEPN1Q6WQI6 88 aa2.26□□□□□ -2.05
GAPLINC-201ENST00000578664 TMEM14BQ9NUH8 114 aa2.26□□□□□ -2.05
GAPLINC-201ENST00000578664 MRPL36Q9P0J6 103 aaKnown RBP2.26□□□□□ -2.05
GAPLINC-201ENST00000578664 KLK9Q9UKQ9 250 aa2.26□□□□□ -2.05
GAPLINC-201ENST00000578664 NOTCH1P46531 2555 aa2.26□□□□□ -2.05
GAPLINC-201ENST00000578664 IGKV3-7A0A075B6H7 116 aa2.25□□□□□ -2.05
GAPLINC-201ENST00000578664 CYP2G1PQ6ZSU1 146 aa2.25□□□□□ -2.05
GAPLINC-201ENST00000578664 TMEM167AQ8TBQ9 72 aa2.25□□□□□ -2.05
GAPLINC-201ENST00000578664 LIMD2Q9BT23 127 aa2.25□□□□□ -2.05
GAPLINC-201ENST00000578664 TRGV4A0A0C4DH28 118 aa2.24□□□□□ -2.05
GAPLINC-201ENST00000578664 PDE6GP18545 87 aa2.24□□□□□ -2.05
GAPLINC-201ENST00000578664 KRTAP10-5P60370 271 aa2.24□□□□□ -2.05
GAPLINC-201ENST00000578664 PRCDQ00LT1 54 aa2.24□□□□□ -2.05
GAPLINC-201ENST00000578664 LYSTQ99698 3801 aa2.24□□□□□ -2.05
GAPLINC-201ENST00000578664 NDUFA4L2Q9NRX3 87 aa2.24□□□□□ -2.05
GAPLINC-201ENST00000578664 TMEM167BQ9NRX6 74 aa2.24□□□□□ -2.05
GAPLINC-201ENST00000578664 DYNC2H1Q8NCM8 4307 aaKnown RBP2.24□□□□□ -2.05
GAPLINC-201ENST00000578664 HYDINQ4G0P3 5121 aa2.24□□□□□ -2.05
GAPLINC-201ENST00000578664 DNAH7Q8WXX0 4024 aa2.23□□□□□ -2.05
GAPLINC-201ENST00000578664 TRBV7-3A0A075B6L6 115 aa2.23□□□□□ -2.05
GAPLINC-201ENST00000578664 TRBV6-1A0A0K0K1D8 114 aa2.23□□□□□ -2.05
GAPLINC-201ENST00000578664 TEX49A0A1B0GTD5 131 aa2.23□□□□□ -2.05
GAPLINC-201ENST00000578664 CEBPZOSA8MTT3 80 aa2.23□□□□□ -2.05
GAPLINC-201ENST00000578664 JMJD7-PLA2G4BH0Y9G9 81 aa2.23□□□□□ -2.05
GAPLINC-201ENST00000578664 EFNA4P52798 201 aa2.23□□□□□ -2.05
GAPLINC-201ENST00000578664 VMO1Q7Z5L0 202 aa2.23□□□□□ -2.05
GAPLINC-201ENST00000578664 GAFA1Q96PS6 74 aa2.23□□□□□ -2.05
GAPLINC-201ENST00000578664 ST20Q9HBF5 79 aa2.23□□□□□ -2.05
GAPLINC-201ENST00000578664 RYR2Q92736 4967 aa2.23□□□□□ -2.05
GAPLINC-201ENST00000578664 DNAH1Q9P2D7 4330 aa2.23□□□□□ -2.05
GAPLINC-201ENST00000578664 WNK2Q9Y3S1 2297 aa2.22□□□□□ -2.05
GAPLINC-201ENST00000578664 SDHAF1A6NFY7 115 aa2.22□□□□□ -2.05
GAPLINC-201ENST00000578664 H7BZZ5 65 aa2.22□□□□□ -2.05
GAPLINC-201ENST00000578664 M0R1W7 72 aa2.22□□□□□ -2.05
GAPLINC-201ENST00000578664 TFF1P04155 84 aa2.22□□□□□ -2.05
GAPLINC-201ENST00000578664 ADIRFQ15847 76 aa2.22□□□□□ -2.05
GAPLINC-201ENST00000578664 MINOS1Q5TGZ0 78 aa2.22□□□□□ -2.05
GAPLINC-201ENST00000578664 CYSTM1Q9H1C7 97 aa2.22□□□□□ -2.05
GAPLINC-201ENST00000578664 PRO1854Q9UHT4 67 aa2.22□□□□□ -2.05
GAPLINC-201ENST00000578664 SPCS1Q9Y6A9 102 aa2.22□□□□□ -2.05
GAPLINC-201ENST00000578664 HUWE1Q7Z6Z7 4374 aaKnown RBP2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 HIGD1CA8MV81 97 aa2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 LYNX1G3V0Z9 82 aa2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 BCE1O60756 84 aa2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 COX6CP09669 75 aa2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 SAA2P0DJI9 122 aaPredicted RBP2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 LYNX1P0DP58 116 aa2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 IAPPP10997 89 aa2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 EDDM3BP56851 147 aa2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 ELOF1P60002 83 aaKnown RBP2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 KLKP1Q107X0 134 aa2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 PSMG4Q5JS54 123 aa2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 HCP5Q6MZN7 132 aa2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 Q8N6K4 173 aa2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 BPESC1Q9GZL8 116 aa2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 TMEM14CQ9P0S9 112 aa2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 GNG13Q9P2W3 67 aa2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 WNK1Q9H4A3 2382 aa2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 DOCK11Q5JSL3 2073 aa2.21□□□□□ -2.06
GAPLINC-201ENST00000578664 TENM3Q9P273 2699 aa2.2□□□□□ -2.06
GAPLINC-201ENST00000578664 TRAV22A0A0B4J277 110 aa2.2□□□□□ -2.06
GAPLINC-201ENST00000578664 A0A1B0GVY2 172 aa2.2□□□□□ -2.06
GAPLINC-201ENST00000578664 A0A1W2PPM0 123 aa2.2□□□□□ -2.06
GAPLINC-201ENST00000578664 CLPSL1A2RUU4 121 aa2.2□□□□□ -2.06
GAPLINC-201ENST00000578664 NDUFA3O95167 84 aa2.2□□□□□ -2.06
GAPLINC-201ENST00000578664 GCHFRP30047 84 aa2.2□□□□□ -2.06
GAPLINC-201ENST00000578664 RPL39P5Q59GN2 51 aa2.2□□□□□ -2.06
GAPLINC-201ENST00000578664 Q5VV11 94 aa2.2□□□□□ -2.06
GAPLINC-201ENST00000578664 LINC01600Q96MT4 127 aa2.2□□□□□ -2.06
GAPLINC-201ENST00000578664 NXT2Q9NPJ8 142 aaKnown RBP2.2□□□□□ -2.06
GAPLINC-201ENST00000578664 LENEPQ9Y5L5 61 aa2.2□□□□□ -2.06
GAPLINC-201ENST00000578664 BIRC6Q9NR09 4857 aa2.2□□□□□ -2.06
GAPLINC-201ENST00000578664 FRAS1Q86XX4 4008 aa2.2□□□□□ -2.06
GAPLINC-201ENST00000578664 SMIM27A0A1W2PRY6 76 aa2.19□□□□□ -2.06
GAPLINC-201ENST00000578664 INE1O15225 51 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms