RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 DYNC1H1Q14204 4646 aaKnown RBP8.47□□□□□ -1.05
SRSF1-202ENST00000578430 IGLV1-50A0A075B6I6 118 aa8.46□□□□□ -1.06
SRSF1-202ENST00000578430 COX6CP09669 75 aa8.46□□□□□ -1.06
SRSF1-202ENST00000578430 PSMB2P49721 201 aa8.46□□□□□ -1.06
SRSF1-202ENST00000578430 KRTAP10-1P60331 282 aa8.46□□□□□ -1.06
SRSF1-202ENST00000578430 LYRM7Q5U5X0 104 aa8.46□□□□□ -1.06
SRSF1-202ENST00000578430 SMIM11BQ8TCY0 68 aa8.46□□□□□ -1.06
SRSF1-202ENST00000578430 KCNQ1DNQ9H478 68 aa8.46□□□□□ -1.06
SRSF1-202ENST00000578430 TRAV23DV6A0A075B6W5 121 aa8.45□□□□□ -1.06
SRSF1-202ENST00000578430 GAGE10A6NGK3 116 aa8.45□□□□□ -1.06
SRSF1-202ENST00000578430 H3BUT2 72 aa8.45□□□□□ -1.06
SRSF1-202ENST00000578430 PRYO14603 147 aa8.45□□□□□ -1.06
SRSF1-202ENST00000578430 DNAH8Q96JB1 4490 aa8.44□□□□□ -1.06
SRSF1-202ENST00000578430 KRTAP4-8Q9BYQ9 185 aa8.44□□□□□ -1.06
SRSF1-202ENST00000578430 TRBV7-6A0A0J9YX20 115 aa8.43□□□□□ -1.06
SRSF1-202ENST00000578430 A0A1W2PPM0 123 aa8.43□□□□□ -1.06
SRSF1-202ENST00000578430 TRIAP1O43715 76 aa8.43□□□□□ -1.06
SRSF1-202ENST00000578430 FABP2P12104 132 aa8.43□□□□□ -1.06
SRSF1-202ENST00000578430 VAMP3Q15836 100 aa8.43□□□□□ -1.06
SRSF1-202ENST00000578430 DIRC1Q969H9 104 aa8.43□□□□□ -1.06
SRSF1-202ENST00000578430 H0YGX0 51 aa8.42□□□□□ -1.06
SRSF1-202ENST00000578430 ZNF73O43830 326 aaPredicted RBP8.42□□□□□ -1.06
SRSF1-202ENST00000578430 SCGB1C2P0DMR2 95 aa8.42□□□□□ -1.06
SRSF1-202ENST00000578430 UBE2BP63146 152 aa8.42□□□□□ -1.06
SRSF1-202ENST00000578430 PHF5AQ7RTV0 110 aaKnown RBP8.42□□□□□ -1.06
SRSF1-202ENST00000578430 FAM30AQ9NZY2 134 aa8.42□□□□□ -1.06
SRSF1-202ENST00000578430 RPL37AP8A6NKH3 93 aa8.41□□□□□ -1.06
SRSF1-202ENST00000578430 C6orf99Q4VX62 202 aa8.41□□□□□ -1.06
SRSF1-202ENST00000578430 NAA38Q9BRA0 125 aaKnown RBP8.41□□□□□ -1.06
SRSF1-202ENST00000578430 ABCA13Q86UQ4 5058 aa8.41□□□□□ -1.06
SRSF1-202ENST00000578430 SPRR1AP35321 89 aa8.4□□□□□ -1.06
SRSF1-202ENST00000578430 CIRBP-AS1Q8TBR5 109 aa8.4□□□□□ -1.06
SRSF1-202ENST00000578430 TRBV20-1A0A075B6N2 111 aa8.39□□□□□ -1.07
SRSF1-202ENST00000578430 REG3GQ6UW15 175 aa8.39□□□□□ -1.07
SRSF1-202ENST00000578430 SCXQ7RTU7 201 aa8.38□□□□□ -1.07
SRSF1-202ENST00000578430 ETDCA0A1B0GVM5 59 aa8.37□□□□□ -1.07
SRSF1-202ENST00000578430 COX7BP24311 80 aa8.37□□□□□ -1.07
SRSF1-202ENST00000578430 A0A1B0GX51 115 aa8.36□□□□□ -1.07
SRSF1-202ENST00000578430 SNCGO76070 127 aa8.36□□□□□ -1.07
SRSF1-202ENST00000578430 ELOF1P60002 83 aaKnown RBP8.36□□□□□ -1.07
SRSF1-202ENST00000578430 SPCS1Q9Y6A9 102 aa8.36□□□□□ -1.07
SRSF1-202ENST00000578430 LRP1BQ9NZR2 4599 aa8.36□□□□□ -1.07
SRSF1-202ENST00000578430 KRTAP4-16G5E9R7 235 aaPredicted RBP8.35□□□□□ -1.07
SRSF1-202ENST00000578430 ATXN8Q156A1 80 aa8.35□□□□□ -1.07
SRSF1-202ENST00000578430 GTF2H5Q6ZYL4 71 aa8.35□□□□□ -1.07
SRSF1-202ENST00000578430 INAFM2P0DMQ5 153 aa8.34□□□□□ -1.07
SRSF1-202ENST00000578430 HSPG2P98160 4391 aa8.34□□□□□ -1.07
SRSF1-202ENST00000578430 A0A1B0GV90 55 aa8.33□□□□□ -1.08
SRSF1-202ENST00000578430 B5MCH6 92 aa8.33□□□□□ -1.08
SRSF1-202ENST00000578430 H0Y9J4 135 aa8.33□□□□□ -1.08
SRSF1-202ENST00000578430 K7EP34 96 aa8.33□□□□□ -1.08
SRSF1-202ENST00000578430 LST1O00453 97 aa8.33□□□□□ -1.08
SRSF1-202ENST00000578430 SLC25A20O43772 301 aa8.33□□□□□ -1.08
SRSF1-202ENST00000578430 BCE1O60756 84 aa8.33□□□□□ -1.08
SRSF1-202ENST00000578430 TCL1BO95988 128 aa8.33□□□□□ -1.08
SRSF1-202ENST00000578430 LINC00575Q6W349 94 aa8.33□□□□□ -1.08
SRSF1-202ENST00000578430 Q6ZRX8 168 aa8.33□□□□□ -1.08
SRSF1-202ENST00000578430 KRTAP11-1Q8IUC1 163 aa8.33□□□□□ -1.08
SRSF1-202ENST00000578430 CLEC2BQ92478 149 aa8.33□□□□□ -1.08
SRSF1-202ENST00000578430 KRTAP4-5Q9BYR2 181 aa8.33□□□□□ -1.08
SRSF1-202ENST00000578430 TRACP01848 142 aa8.32□□□□□ -1.08
SRSF1-202ENST00000578430 DHRS4-AS1Q9P1J3 65 aa8.32□□□□□ -1.08
SRSF1-202ENST00000578430 FAM19A1Q7Z5A9 133 aa8.31□□□□□ -1.08
SRSF1-202ENST00000578430 PSORS1C2Q9UIG4 136 aa8.31□□□□□ -1.08
SRSF1-202ENST00000578430 hADV29S1A0JD25 119 aa8.3□□□□□ -1.08
SRSF1-202ENST00000578430 XGP55808 180 aa8.3□□□□□ -1.08
SRSF1-202ENST00000578430 FAM218AQ96MZ4 157 aa8.3□□□□□ -1.08
SRSF1-202ENST00000578430 DNAL4O96015 105 aa8.29□□□□□ -1.08
SRSF1-202ENST00000578430 UBE2AP49459 152 aa8.28□□□□□ -1.08
SRSF1-202ENST00000578430 H3BMG7 143 aa8.27□□□□□ -1.09
SRSF1-202ENST00000578430 GHRHP01286 108 aa8.27□□□□□ -1.09
SRSF1-202ENST00000578430 HAMPP81172 84 aa8.27□□□□□ -1.09
SRSF1-202ENST00000578430 UBE2V1Q13404 147 aa8.27□□□□□ -1.09
SRSF1-202ENST00000578430 C1orf137Q5JT78 98 aa8.27□□□□□ -1.09
SRSF1-202ENST00000578430 KRTAP9-2Q9BYQ4 174 aa8.27□□□□□ -1.09
SRSF1-202ENST00000578430 H3BQ85 93 aa8.26□□□□□ -1.09
SRSF1-202ENST00000578430 CDK2AP2O75956 126 aa8.26□□□□□ -1.09
SRSF1-202ENST00000578430 OCIAD2Q56VL3 154 aa8.26□□□□□ -1.09
SRSF1-202ENST00000578430 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.26□□□□□ -1.09
SRSF1-202ENST00000578430 KRTAP13-1Q8IUC0 172 aa8.26□□□□□ -1.09
SRSF1-202ENST00000578430 Q9BRP9 147 aa8.26□□□□□ -1.09
SRSF1-202ENST00000578430 APOBP04114 4563 aaKnown RBP8.25□□□□□ -1.09
SRSF1-202ENST00000578430 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.25□□□□□ -1.09
SRSF1-202ENST00000578430 PRLHP81277 87 aa8.25□□□□□ -1.09
SRSF1-202ENST00000578430 IGLV7-43P04211 117 aa8.24□□□□□ -1.09
SRSF1-202ENST00000578430 SMCR5Q8TEV8 140 aa8.24□□□□□ -1.09
SRSF1-202ENST00000578430 C9JAW5 83 aa8.23□□□□□ -1.09
SRSF1-202ENST00000578430 ZNF861PO60384 105 aa8.23□□□□□ -1.09
SRSF1-202ENST00000578430 ORMDL1Q9P0S3 153 aa8.23□□□□□ -1.09
SRSF1-202ENST00000578430 F8W1H4 67 aa8.22□□□□□ -1.09
SRSF1-202ENST00000578430 H3BT86 120 aa8.22□□□□□ -1.09
SRSF1-202ENST00000578430 Q6ZQY7 126 aa8.22□□□□□ -1.09
SRSF1-202ENST00000578430 HIGD2AQ9BW72 106 aa8.22□□□□□ -1.09
SRSF1-202ENST00000578430 KRTAP9-6A0A140TA67 174 aa8.21□□□□□ -1.1
SRSF1-202ENST00000578430 PPDPFLQ8WWR9 84 aa8.21□□□□□ -1.1
SRSF1-202ENST00000578430 LINC01600Q96MT4 127 aa8.21□□□□□ -1.1
SRSF1-202ENST00000578430 BAALC-AS2P0C853 105 aa8.2□□□□□ -1.1
SRSF1-202ENST00000578430 RPL37AP61513 92 aaKnown RBP8.2□□□□□ -1.1
SRSF1-202ENST00000578430 TMEM256-PLSCR3K7ERE1 68 aa8.19□□□□□ -1.1
SRSF1-202ENST00000578430 ERC2-IT1O76042 136 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms