RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 NMUP48645 174 aa4.29□□□□□ -1.72
CASC3-205ENST00000577605 PLEKHB2Q96CS7 222 aa4.29□□□□□ -1.72
CASC3-205ENST00000577605 LINC00167Q96N53 147 aa4.29□□□□□ -1.72
CASC3-205ENST00000577605 SND1-IT1Q9HBX3 110 aa4.29□□□□□ -1.72
CASC3-205ENST00000577605 LINC00158P58513 81 aa4.28□□□□□ -1.72
CASC3-205ENST00000577605 KRTAP9-8Q9BYQ0 159 aa4.28□□□□□ -1.72
CASC3-205ENST00000577605 LEPROTO15243 131 aa4.27□□□□□ -1.73
CASC3-205ENST00000577605 IGKCP01834 107 aa4.27□□□□□ -1.73
CASC3-205ENST00000577605 FABP4P15090 132 aa4.27□□□□□ -1.73
CASC3-205ENST00000577605 KRTAP11-1Q8IUC1 163 aa4.27□□□□□ -1.73
CASC3-205ENST00000577605 NDUFA12Q9UI09 145 aa4.27□□□□□ -1.73
CASC3-205ENST00000577605 IGKV2D-26A0A0A0MRZ7 120 aa4.26□□□□□ -1.73
CASC3-205ENST00000577605 M0R378 163 aa4.26□□□□□ -1.73
CASC3-205ENST00000577605 HIST1H2BKO60814 126 aa4.26□□□□□ -1.73
CASC3-205ENST00000577605 HIST1H2BJP06899 126 aa4.26□□□□□ -1.73
CASC3-205ENST00000577605 HIST1H2BOP23527 126 aa4.26□□□□□ -1.73
CASC3-205ENST00000577605 HIST1H2BBP33778 126 aa4.26□□□□□ -1.73
CASC3-205ENST00000577605 NDUFV3P56181 108 aaKnown RBP4.26□□□□□ -1.73
CASC3-205ENST00000577605 HIST1H2BDP58876 126 aa4.26□□□□□ -1.73
CASC3-205ENST00000577605 HIST1H2BCP62807 126 aa4.26□□□□□ -1.73
CASC3-205ENST00000577605 TAL2Q16559 108 aa4.26□□□□□ -1.73
CASC3-205ENST00000577605 HIST2H2BEQ16778 126 aa4.26□□□□□ -1.73
CASC3-205ENST00000577605 MEIG1Q5JSS6 88 aa4.26□□□□□ -1.73
CASC3-205ENST00000577605 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.26□□□□□ -1.73
CASC3-205ENST00000577605 HIST1H2BHQ93079 126 aa4.26□□□□□ -1.73
CASC3-205ENST00000577605 HIST1H2BNQ99877 126 aa4.26□□□□□ -1.73
CASC3-205ENST00000577605 HIST1H2BMQ99879 126 aa4.26□□□□□ -1.73
CASC3-205ENST00000577605 LOC107984156A0A0G2JMH3 177 aa4.25□□□□□ -1.73
CASC3-205ENST00000577605 RPL37AP8A6NKH3 93 aa4.25□□□□□ -1.73
CASC3-205ENST00000577605 J3QQQ9 107 aa4.25□□□□□ -1.73
CASC3-205ENST00000577605 LGALS3P17931 250 aaKnown RBP4.25□□□□□ -1.73
CASC3-205ENST00000577605 UBE2AP49459 152 aa4.25□□□□□ -1.73
CASC3-205ENST00000577605 COA6Q5JTJ3 125 aaKnown RBP4.25□□□□□ -1.73
CASC3-205ENST00000577605 ARL17AQ8IVW1 177 aa4.25□□□□□ -1.73
CASC3-205ENST00000577605 HIST3H2BBQ8N257 126 aa4.25□□□□□ -1.73
CASC3-205ENST00000577605 SYS1-DBNDD2H3BUS1 97 aa4.24□□□□□ -1.73
CASC3-205ENST00000577605 SMIM13P0DJ93 91 aa4.24□□□□□ -1.73
CASC3-205ENST00000577605 MIR7-3HGQ8N6C7 128 aa4.24□□□□□ -1.73
CASC3-205ENST00000577605 IGKV2-28A0A075B6P5 120 aa4.23□□□□□ -1.73
CASC3-205ENST00000577605 IGKV2D-28P01615 120 aa4.23□□□□□ -1.73
CASC3-205ENST00000577605 LINC01545Q5VT33 79 aa4.23□□□□□ -1.73
CASC3-205ENST00000577605 MIEN1Q9BRT3 115 aa4.23□□□□□ -1.73
CASC3-205ENST00000577605 OCR1Q9BZK8 76 aa4.23□□□□□ -1.73
CASC3-205ENST00000577605 TMEM126AQ9H061 195 aa4.23□□□□□ -1.73
CASC3-205ENST00000577605 MYCBP2O75592 4640 aa4.22□□□□□ -1.73
CASC3-205ENST00000577605 TRBV10-2A0A0K0K1G8 114 aa4.22□□□□□ -1.73
CASC3-205ENST00000577605 NDUFC2O95298 119 aa4.22□□□□□ -1.73
CASC3-205ENST00000577605 KRTAP1-4P0C5Y4 121 aa4.22□□□□□ -1.73
CASC3-205ENST00000577605 CRYGAP11844 174 aa4.22□□□□□ -1.73
CASC3-205ENST00000577605 FAM229BQ4G0N7 80 aa4.22□□□□□ -1.73
CASC3-205ENST00000577605 FAM19A1Q7Z5A9 133 aa4.22□□□□□ -1.73
CASC3-205ENST00000577605 KRTAP13-1Q8IUC0 172 aa4.22□□□□□ -1.73
CASC3-205ENST00000577605 UBR4Q5T4S7 5183 aa4.22□□□□□ -1.73
CASC3-205ENST00000577605 DMBT1Q9UGM3 2413 aaPredicted RBP4.21□□□□□ -1.74
CASC3-205ENST00000577605 TIMM17BO60830 172 aa4.21□□□□□ -1.74
CASC3-205ENST00000577605 LINC01547P58512 204 aaPredicted RBP4.21□□□□□ -1.74
CASC3-205ENST00000577605 ADAMTSL4-AS1Q5T5F5 129 aa4.21□□□□□ -1.74
CASC3-205ENST00000577605 LINC00337Q8N6G1 96 aa4.21□□□□□ -1.74
CASC3-205ENST00000577605 COPS9Q8WXC6 57 aa4.21□□□□□ -1.74
CASC3-205ENST00000577605 SIGMAR1Q99720 223 aa4.21□□□□□ -1.74
CASC3-205ENST00000577605 KCNQ1DNQ9H478 68 aa4.21□□□□□ -1.74
CASC3-205ENST00000577605 ZNF706Q9Y5V0 76 aaPredicted RBP4.21□□□□□ -1.74
CASC3-205ENST00000577605 FLG2Q5D862 2391 aaPredicted RBP4.21□□□□□ -1.74
CASC3-205ENST00000577605 A6NDN8 102 aa4.2□□□□□ -1.74
CASC3-205ENST00000577605 HIST1H4GQ99525 98 aa4.2□□□□□ -1.74
CASC3-205ENST00000577605 HIST1H2BLQ99880 126 aa4.2□□□□□ -1.74
CASC3-205ENST00000577605 PMCHL2Q9BQD1 86 aa4.2□□□□□ -1.74
CASC3-205ENST00000577605 SPANXB1Q9NS25 103 aaPredicted RBP4.2□□□□□ -1.74
CASC3-205ENST00000577605 A0A0J9YXY3 114 aa4.19□□□□□ -1.74
CASC3-205ENST00000577605 C3orf79P0CE67 100 aa4.19□□□□□ -1.74
CASC3-205ENST00000577605 SPRR1AP35321 89 aa4.19□□□□□ -1.74
CASC3-205ENST00000577605 TSPEAR-AS2P59090 65 aa4.19□□□□□ -1.74
CASC3-205ENST00000577605 ETDCA0A1B0GVM5 59 aa4.18□□□□□ -1.74
CASC3-205ENST00000577605 HINT1P49773 126 aaPredicted RBP4.18□□□□□ -1.74
CASC3-205ENST00000577605 KRTDAPP60985 99 aa4.18□□□□□ -1.74
CASC3-205ENST00000577605 S100A7L2Q5SY68 101 aa4.18□□□□□ -1.74
CASC3-205ENST00000577605 Q6ZVH6 145 aa4.18□□□□□ -1.74
CASC3-205ENST00000577605 Q8NDZ9 215 aa4.18□□□□□ -1.74
CASC3-205ENST00000577605 TYMSOSQ8TAI1 123 aa4.18□□□□□ -1.74
CASC3-205ENST00000577605 HERC1Q15751 4861 aa4.18□□□□□ -1.74
CASC3-205ENST00000577605 ZNF815PA8K554 130 aa4.17□□□□□ -1.74
CASC3-205ENST00000577605 NCR3O14931 201 aa4.17□□□□□ -1.74
CASC3-205ENST00000577605 PRLHP81277 87 aa4.17□□□□□ -1.74
CASC3-205ENST00000577605 SMIM29Q86T20 159 aa4.17□□□□□ -1.74
CASC3-205ENST00000577605 SPANXCQ9NY87 97 aa4.17□□□□□ -1.74
CASC3-205ENST00000577605 SS18L2Q9UHA2 77 aa4.17□□□□□ -1.74
CASC3-205ENST00000577605 TRBV10-3A0A0K0K1G6 114 aa4.16□□□□□ -1.74
CASC3-205ENST00000577605 KRTAP4-16G5E9R7 235 aaPredicted RBP4.16□□□□□ -1.74
CASC3-205ENST00000577605 IGLV6-57P01721 117 aa4.16□□□□□ -1.74
CASC3-205ENST00000577605 IFITM1P13164 125 aa4.16□□□□□ -1.74
CASC3-205ENST00000577605 SPAG11AQ6PDA7 123 aa4.16□□□□□ -1.74
CASC3-205ENST00000577605 SMIM20Q8N5G0 67 aa4.16□□□□□ -1.74
CASC3-205ENST00000577605 HIGD2AQ9BW72 106 aa4.16□□□□□ -1.74
CASC3-205ENST00000577605 SCGB1D4Q6XE38 83 aa4.15□□□□□ -1.75
CASC3-205ENST00000577605 DAND5Q8N907 189 aa4.15□□□□□ -1.75
CASC3-205ENST00000577605 LINC00308Q8TCZ7 52 aa4.15□□□□□ -1.75
CASC3-205ENST00000577605 SPRR4Q96PI1 79 aa4.15□□□□□ -1.75
CASC3-205ENST00000577605 PKHD1L1Q86WI1 4243 aa4.15□□□□□ -1.75
CASC3-205ENST00000577605 LRP1Q07954 4544 aaKnown RBP4.14□□□□□ -1.75
CASC3-205ENST00000577605 FAT3Q8TDW7 4589 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms