RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 RYR1P21817 5038 aa0.19□□□□□ -2.38
TRAPPC8-203ENST00000577474 HMGA1P17096 107 aaKnown RBP0.19□□□□□ -2.38
TRAPPC8-203ENST00000577474 TNRC18O15417 2968 aaPredicted RBP0.19□□□□□ -2.38
TRAPPC8-203ENST00000577474 SUPT6HQ7KZ85 1726 aaKnown RBP0.18□□□□□ -2.38
TRAPPC8-203ENST00000577474 ARHGAP35Q9NRY4 1499 aa0.18□□□□□ -2.38
TRAPPC8-203ENST00000577474 M0R2T5 61 aa0.18□□□□□ -2.38
TRAPPC8-203ENST00000577474 DEFB121Q5J5C9 76 aa0.18□□□□□ -2.38
TRAPPC8-203ENST00000577474 RGPD8O14715 1765 aaPredicted RBP0.18□□□□□ -2.38
TRAPPC8-203ENST00000577474 RGPD5Q99666 1765 aa0.18□□□□□ -2.38
TRAPPC8-203ENST00000577474 HIVEP1P15822 2718 aa0.18□□□□□ -2.38
TRAPPC8-203ENST00000577474 PDZD2O15018 2839 aa0.18□□□□□ -2.38
TRAPPC8-203ENST00000577474 AKAP13Q12802 2813 aa0.18□□□□□ -2.38
TRAPPC8-203ENST00000577474 COL7A1Q02388 2944 aa0.17□□□□□ -2.38
TRAPPC8-203ENST00000577474 TMEM131LA2VDJ0 1609 aa0.17□□□□□ -2.38
TRAPPC8-203ENST00000577474 BCORQ6W2J9 1755 aa0.17□□□□□ -2.38
TRAPPC8-203ENST00000577474 PKD1L1Q8TDX9 2849 aa0.17□□□□□ -2.38
TRAPPC8-203ENST00000577474 COL6A5A8TX70 2615 aa0.17□□□□□ -2.38
TRAPPC8-203ENST00000577474 RYR2Q92736 4967 aa0.17□□□□□ -2.38
TRAPPC8-203ENST00000577474 CELSR3Q9NYQ7 3312 aa0.17□□□□□ -2.38
TRAPPC8-203ENST00000577474 WDFY4Q6ZS81 3184 aa0.17□□□□□ -2.38
TRAPPC8-203ENST00000577474 ANKHD1Q8IWZ3 2542 aaKnown RBP0.17□□□□□ -2.38
TRAPPC8-203ENST00000577474 ABCA13Q86UQ4 5058 aa0.17□□□□□ -2.38
TRAPPC8-203ENST00000577474 RGPD2P0DJD1 1756 aa0.17□□□□□ -2.38
TRAPPC8-203ENST00000577474 SSPOA2VEC9 5147 aa0.16□□□□□ -2.38
TRAPPC8-203ENST00000577474 ABCC1P33527 1531 aa0.16□□□□□ -2.38
TRAPPC8-203ENST00000577474 RNF213Q63HN8 5207 aa0.16□□□□□ -2.38
TRAPPC8-203ENST00000577474 SETD2Q9BYW2 2564 aaPredicted RBP0.16□□□□□ -2.38
TRAPPC8-203ENST00000577474 SPTBN4Q9H254 2564 aa0.16□□□□□ -2.38
TRAPPC8-203ENST00000577474 DSTQ03001 7570 aaKnown RBP0.16□□□□□ -2.38
TRAPPC8-203ENST00000577474 SONP18583 2426 aaKnown RBP0.16□□□□□ -2.38
TRAPPC8-203ENST00000577474 NSD1Q96L73 2696 aaPredicted RBP0.16□□□□□ -2.38
TRAPPC8-203ENST00000577474 FAT2Q9NYQ8 4349 aa0.16□□□□□ -2.38
TRAPPC8-203ENST00000577474 ERVK-7P63135 1459 aa0.16□□□□□ -2.38
TRAPPC8-203ENST00000577474 FLNAP21333 2647 aaKnown RBP0.16□□□□□ -2.38
TRAPPC8-203ENST00000577474 FLNCQ14315 2725 aa0.15□□□□□ -2.38
TRAPPC8-203ENST00000577474 SETXQ7Z333 2677 aaKnown RBP0.15□□□□□ -2.39
TRAPPC8-203ENST00000577474 HERC1Q15751 4861 aa0.15□□□□□ -2.39
TRAPPC8-203ENST00000577474 NBEAL2Q6ZNJ1 2754 aa0.15□□□□□ -2.39
TRAPPC8-203ENST00000577474 DCAF1Q9Y4B6 1507 aa0.15□□□□□ -2.39
TRAPPC8-203ENST00000577474 SRCAPQ6ZRS2 3230 aa0.15□□□□□ -2.39
TRAPPC8-203ENST00000577474 UMAD1C9J7I0 102 aa0.15□□□□□ -2.39
TRAPPC8-203ENST00000577474 IFI27P40305 119 aaPredicted RBP0.15□□□□□ -2.39
TRAPPC8-203ENST00000577474 SCRIBQ14160 1630 aa0.15□□□□□ -2.39
TRAPPC8-203ENST00000577474 RGPD1P0DJD0 1748 aa0.15□□□□□ -2.39
TRAPPC8-203ENST00000577474 CCDC88BA6NC98 1476 aa0.15□□□□□ -2.39
TRAPPC8-203ENST00000577474 NCOA2Q15596 1464 aa0.15□□□□□ -2.39
TRAPPC8-203ENST00000577474 LPAP08519 4548 aa0.15□□□□□ -2.39
TRAPPC8-203ENST00000577474 KALRNO60229 2985 aa0.15□□□□□ -2.39
TRAPPC8-203ENST00000577474 TNXBP22105 4242 aa0.14□□□□□ -2.39
TRAPPC8-203ENST00000577474 PREX1Q8TCU6 1659 aa0.14□□□□□ -2.39
TRAPPC8-203ENST00000577474 NEBP20929 6669 aa0.14□□□□□ -2.39
TRAPPC8-203ENST00000577474 ANKRD11Q6UB99 2663 aaPredicted RBP0.14□□□□□ -2.39
TRAPPC8-203ENST00000577474 LAMA2P24043 3122 aaKnown RBP0.14□□□□□ -2.39
TRAPPC8-203ENST00000577474 ITPR1Q14643 2758 aa0.14□□□□□ -2.39
TRAPPC8-203ENST00000577474 TENM2Q9NT68 2774 aa0.14□□□□□ -2.39
TRAPPC8-203ENST00000577474 CREBBPQ92793 2442 aa0.14□□□□□ -2.39
TRAPPC8-203ENST00000577474 EPPK1P58107 5090 aaKnown RBP0.14□□□□□ -2.39
TRAPPC8-203ENST00000577474 WFDC13Q8IUB5 93 aa0.14□□□□□ -2.39
TRAPPC8-203ENST00000577474 BSNQ9UPA5 3926 aa0.14□□□□□ -2.39
TRAPPC8-203ENST00000577474 HYDINQ4G0P3 5121 aa0.14□□□□□ -2.39
TRAPPC8-203ENST00000577474 RYR3Q15413 4870 aa0.14□□□□□ -2.39
TRAPPC8-203ENST00000577474 USP9XQ93008 2570 aaPredicted RBP0.13□□□□□ -2.39
TRAPPC8-203ENST00000577474 USP32Q8NFA0 1604 aa0.13□□□□□ -2.39
TRAPPC8-203ENST00000577474 KNL1Q8NG31 2342 aa0.13□□□□□ -2.39
TRAPPC8-203ENST00000577474 KMT2AQ03164 3969 aa0.13□□□□□ -2.39
TRAPPC8-203ENST00000577474 HECTD1Q9ULT8 2610 aa0.13□□□□□ -2.39
TRAPPC8-203ENST00000577474 H3BUT2 72 aa0.13□□□□□ -2.39
TRAPPC8-203ENST00000577474 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
TRAPPC8-203ENST00000577474 STAB2Q8WWQ8 2551 aa0.13□□□□□ -2.39
TRAPPC8-203ENST00000577474 TGP01266 2768 aa0.13□□□□□ -2.39
TRAPPC8-203ENST00000577474 DSPP15924 2871 aaKnown RBP0.13□□□□□ -2.39
TRAPPC8-203ENST00000577474 MXRA5Q9NR99 2828 aa0.13□□□□□ -2.39
TRAPPC8-203ENST00000577474 LRRK2Q5S007 2527 aa0.13□□□□□ -2.39
TRAPPC8-203ENST00000577474 MAGI3Q5TCQ9 1506 aa0.13□□□□□ -2.39
TRAPPC8-203ENST00000577474 KDM5DQ9BY66 1539 aa0.13□□□□□ -2.39
TRAPPC8-203ENST00000577474 PRRC2CQ9Y520 2896 aaKnown RBP0.12□□□□□ -2.39
TRAPPC8-203ENST00000577474 USP9YO00507 2555 aaPredicted RBP0.12□□□□□ -2.39
TRAPPC8-203ENST00000577474 HMCN2Q8NDA2 5059 aa0.12□□□□□ -2.39
TRAPPC8-203ENST00000577474 PCNTO95613 3336 aa0.12□□□□□ -2.39
TRAPPC8-203ENST00000577474 CEP170BQ9Y4F5 1589 aaPredicted RBP0.12□□□□□ -2.39
TRAPPC8-203ENST00000577474 DCHS1Q96JQ0 3298 aa0.12□□□□□ -2.39
TRAPPC8-203ENST00000577474 BVES-AS1Q5T3Y7 98 aa0.12□□□□□ -2.39
TRAPPC8-203ENST00000577474 ITPR3Q14573 2671 aa0.12□□□□□ -2.39
TRAPPC8-203ENST00000577474 GCN1Q92616 2671 aaKnown RBP0.12□□□□□ -2.39
TRAPPC8-203ENST00000577474 MYO18BQ8IUG5 2567 aa0.12□□□□□ -2.39
TRAPPC8-203ENST00000577474 ZANQ9Y493 2812 aa0.12□□□□□ -2.39
TRAPPC8-203ENST00000577474 CFAP46Q8IYW2 2715 aa0.12□□□□□ -2.39
TRAPPC8-203ENST00000577474 REV3LO60673 3130 aa0.11□□□□□ -2.39
TRAPPC8-203ENST00000577474 DOPEY1Q5JWR5 2465 aa0.11□□□□□ -2.39
TRAPPC8-203ENST00000577474 UNC80Q8N2C7 3258 aa0.11□□□□□ -2.39
TRAPPC8-203ENST00000577474 FASNP49327 2511 aaKnown RBP0.11□□□□□ -2.39
TRAPPC8-203ENST00000577474 A0A087WXM4 84 aa0.11□□□□□ -2.39
TRAPPC8-203ENST00000577474 KRTAP20-1Q3LI63 56 aa0.11□□□□□ -2.39
TRAPPC8-203ENST00000577474 USH2AO75445 5202 aa0.11□□□□□ -2.39
TRAPPC8-203ENST00000577474 SPEGQ15772 3267 aa0.11□□□□□ -2.39
TRAPPC8-203ENST00000577474 RIF1Q5UIP0 2472 aaKnown RBP0.11□□□□□ -2.39
TRAPPC8-203ENST00000577474 BOD1L1Q8NFC6 3051 aa0.11□□□□□ -2.39
TRAPPC8-203ENST00000577474 LAMA3Q16787 3333 aa0.11□□□□□ -2.39
TRAPPC8-203ENST00000577474 MYCBP2O75592 4640 aa0.1□□□□□ -2.39
TRAPPC8-203ENST00000577474 NBEAQ8NFP9 2946 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms