RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 H3BUT2 72 aa10.28□□□□□ -0.76
ERCC4-208ENST00000576348 RYR3Q15413 4870 aa10.27□□□□□ -0.77
ERCC4-208ENST00000576348 TRIAP1O43715 76 aa10.27□□□□□ -0.77
ERCC4-208ENST00000576348 COX7BP24311 80 aa10.27□□□□□ -0.77
ERCC4-208ENST00000576348 LYRM7Q5U5X0 104 aa10.27□□□□□ -0.77
ERCC4-208ENST00000576348 XGP55808 180 aa10.26□□□□□ -0.77
ERCC4-208ENST00000576348 FAM19A1Q7Z5A9 133 aa10.26□□□□□ -0.77
ERCC4-208ENST00000576348 UBE2AP49459 152 aa10.25□□□□□ -0.77
ERCC4-208ENST00000576348 C1orf137Q5JT78 98 aa10.25□□□□□ -0.77
ERCC4-208ENST00000576348 KRTAP11-1Q8IUC1 163 aa10.25□□□□□ -0.77
ERCC4-208ENST00000576348 PSORS1C2Q9UIG4 136 aa10.25□□□□□ -0.77
ERCC4-208ENST00000576348 TRBV7-6A0A0J9YX20 115 aa10.24□□□□□ -0.77
ERCC4-208ENST00000576348 BCE1O60756 84 aa10.24□□□□□ -0.77
ERCC4-208ENST00000576348 H0YGX0 51 aa10.23□□□□□ -0.77
ERCC4-208ENST00000576348 CDK2AP2O75956 126 aa10.23□□□□□ -0.77
ERCC4-208ENST00000576348 SNCGO76070 127 aa10.23□□□□□ -0.77
ERCC4-208ENST00000576348 FABP2P12104 132 aa10.23□□□□□ -0.77
ERCC4-208ENST00000576348 SPRR1AP35321 89 aa10.23□□□□□ -0.77
ERCC4-208ENST00000576348 SLC25A20O43772 301 aa10.22□□□□□ -0.77
ERCC4-208ENST00000576348 SMR3BP02814 79 aaPredicted RBP10.22□□□□□ -0.77
ERCC4-208ENST00000576348 LINC00528Q8N1L1 170 aa10.22□□□□□ -0.77
ERCC4-208ENST00000576348 A0A1W2PPM0 123 aa10.2□□□□□ -0.78
ERCC4-208ENST00000576348 B5MCH6 92 aa10.2□□□□□ -0.78
ERCC4-208ENST00000576348 ELOF1P60002 83 aaKnown RBP10.2□□□□□ -0.78
ERCC4-208ENST00000576348 RPL37AP61513 92 aaKnown RBP10.19□□□□□ -0.78
ERCC4-208ENST00000576348 PRLHP81277 87 aa10.19□□□□□ -0.78
ERCC4-208ENST00000576348 Q6ZRX8 168 aa10.19□□□□□ -0.78
ERCC4-208ENST00000576348 DNAH5Q8TE73 4624 aa10.18□□□□□ -0.78
ERCC4-208ENST00000576348 CLEC2BQ92478 149 aa10.18□□□□□ -0.78
ERCC4-208ENST00000576348 DHRS4-AS1Q9P1J3 65 aa10.18□□□□□ -0.78
ERCC4-208ENST00000576348 KRTAP4-16G5E9R7 235 aaPredicted RBP10.17□□□□□ -0.78
ERCC4-208ENST00000576348 HIGD2AQ9BW72 106 aa10.17□□□□□ -0.78
ERCC4-208ENST00000576348 PKHD1P08F94 4074 aa10.16□□□□□ -0.78
ERCC4-208ENST00000576348 DYNC1H1Q14204 4646 aaKnown RBP10.16□□□□□ -0.78
ERCC4-208ENST00000576348 TRBV20-1A0A075B6N2 111 aa10.15□□□□□ -0.78
ERCC4-208ENST00000576348 FAM229AH3BQW9 127 aa10.15□□□□□ -0.78
ERCC4-208ENST00000576348 IGLV7-43P04211 117 aa10.15□□□□□ -0.78
ERCC4-208ENST00000576348 INAFM2P0DMQ5 153 aa10.15□□□□□ -0.78
ERCC4-208ENST00000576348 ATXN8Q156A1 80 aa10.15□□□□□ -0.78
ERCC4-208ENST00000576348 LINC00575Q6W349 94 aa10.15□□□□□ -0.78
ERCC4-208ENST00000576348 SPCS1Q9Y6A9 102 aa10.15□□□□□ -0.78
ERCC4-208ENST00000576348 hADV29S1A0JD25 119 aa10.14□□□□□ -0.79
ERCC4-208ENST00000576348 H0Y9J4 135 aa10.14□□□□□ -0.79
ERCC4-208ENST00000576348 DNAL4O96015 105 aa10.14□□□□□ -0.79
ERCC4-208ENST00000576348 DNAH8Q96JB1 4490 aa10.12□□□□□ -0.79
ERCC4-208ENST00000576348 A0A1B0GX51 115 aa10.12□□□□□ -0.79
ERCC4-208ENST00000576348 ZNF861PO60384 105 aa10.12□□□□□ -0.79
ERCC4-208ENST00000576348 TCL1BO95988 128 aa10.12□□□□□ -0.79
ERCC4-208ENST00000576348 PLA2G1BP04054 148 aaKnown RBP10.12□□□□□ -0.79
ERCC4-208ENST00000576348 FAM218AQ96MZ4 157 aa10.12□□□□□ -0.79
ERCC4-208ENST00000576348 LST1O00453 97 aa10.11□□□□□ -0.79
ERCC4-208ENST00000576348 SMCR5Q8TEV8 140 aa10.11□□□□□ -0.79
ERCC4-208ENST00000576348 Q9BRP9 147 aa10.11□□□□□ -0.79
ERCC4-208ENST00000576348 LRP1BQ9NZR2 4599 aa10.11□□□□□ -0.79
ERCC4-208ENST00000576348 GTF2H5Q6ZYL4 71 aa10.1□□□□□ -0.79
ERCC4-208ENST00000576348 K7EP34 96 aa10.09□□□□□ -0.79
ERCC4-208ENST00000576348 KRTAP13-1Q8IUC0 172 aa10.09□□□□□ -0.79
ERCC4-208ENST00000576348 TRACP01848 142 aa10.08□□□□□ -0.8
ERCC4-208ENST00000576348 A0A1B0GV90 55 aa10.07□□□□□ -0.8
ERCC4-208ENST00000576348 ERC2-IT1O76042 136 aa10.06□□□□□ -0.8
ERCC4-208ENST00000576348 GHRHP01286 108 aa10.06□□□□□ -0.8
ERCC4-208ENST00000576348 Q5VSD8 79 aa10.06□□□□□ -0.8
ERCC4-208ENST00000576348 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.06□□□□□ -0.8
ERCC4-208ENST00000576348 Q6ZQY7 126 aa10.06□□□□□ -0.8
ERCC4-208ENST00000576348 ZNF706Q9Y5V0 76 aaPredicted RBP10.06□□□□□ -0.8
ERCC4-208ENST00000576348 DEFB105AQ8NG35 78 aa10.05□□□□□ -0.8
ERCC4-208ENST00000576348 H3BMG7 143 aa10.04□□□□□ -0.8
ERCC4-208ENST00000576348 OCIAD2Q56VL3 154 aa10.04□□□□□ -0.8
ERCC4-208ENST00000576348 ORMDL1Q9P0S3 153 aa10.04□□□□□ -0.8
ERCC4-208ENST00000576348 C9JAW5 83 aa10.03□□□□□ -0.8
ERCC4-208ENST00000576348 ST20-AS1Q8NBB2 130 aa10.03□□□□□ -0.8
ERCC4-208ENST00000576348 SPINK6Q6UWN8 80 aa10.02□□□□□ -0.81
ERCC4-208ENST00000576348 H3BQ85 93 aa10.01□□□□□ -0.81
ERCC4-208ENST00000576348 GAGE2AQ6NT46 116 aa10.01□□□□□ -0.81
ERCC4-208ENST00000576348 Q8N1X5 172 aa10.01□□□□□ -0.81
ERCC4-208ENST00000576348 BAALC-AS2P0C853 105 aa9.99□□□□□ -0.81
ERCC4-208ENST00000576348 TEX49A0A1B0GTD5 131 aa9.98□□□□□ -0.81
ERCC4-208ENST00000576348 SPRR4Q96PI1 79 aa9.98□□□□□ -0.81
ERCC4-208ENST00000576348 APOBP04114 4563 aaKnown RBP9.98□□□□□ -0.81
ERCC4-208ENST00000576348 TMEM256-PLSCR3K7ERE1 68 aa9.97□□□□□ -0.81
ERCC4-208ENST00000576348 MTURNQ8N3F0 131 aa9.97□□□□□ -0.81
ERCC4-208ENST00000576348 PPDPFLQ8WWR9 84 aa9.97□□□□□ -0.81
ERCC4-208ENST00000576348 IGLV5-48A0A075B6I7 105 aa9.96□□□□□ -0.82
ERCC4-208ENST00000576348 KRTAP10-4P60372 401 aaPredicted RBP9.96□□□□□ -0.82
ERCC4-208ENST00000576348 UBE2V1Q13404 147 aa9.96□□□□□ -0.82
ERCC4-208ENST00000576348 F8WEM9 126 aa9.94□□□□□ -0.82
ERCC4-208ENST00000576348 H3BT86 120 aa9.94□□□□□ -0.82
ERCC4-208ENST00000576348 LAMTOR3Q9UHA4 124 aa9.94□□□□□ -0.82
ERCC4-208ENST00000576348 Q8N377 158 aa9.93□□□□□ -0.82
ERCC4-208ENST00000576348 EPPK1P58107 5090 aaKnown RBP9.92□□□□□ -0.82
ERCC4-208ENST00000576348 LINC01547P58512 204 aaPredicted RBP9.92□□□□□ -0.82
ERCC4-208ENST00000576348 ANKRD29Q8N6D5 301 aa9.92□□□□□ -0.82
ERCC4-208ENST00000576348 SPRR1BP22528 89 aa9.91□□□□□ -0.82
ERCC4-208ENST00000576348 F8W1H4 67 aa9.9□□□□□ -0.82
ERCC4-208ENST00000576348 NDUFV3P56181 108 aaKnown RBP9.9□□□□□ -0.82
ERCC4-208ENST00000576348 LINC00483Q53H64 154 aa9.9□□□□□ -0.82
ERCC4-208ENST00000576348 ANAPC11Q9NYG5 84 aa9.9□□□□□ -0.82
ERCC4-208ENST00000576348 C3orf22Q8N5N4 141 aa9.89□□□□□ -0.83
ERCC4-208ENST00000576348 FAM229BQ4G0N7 80 aa9.88□□□□□ -0.83
ERCC4-208ENST00000576348 IGLV9-49A0A0B4J1Y8 123 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms