RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 COPS9Q8WXC6 57 aa5.26□□□□□ -1.57
NUP88-211ENST00000575976 HIGD1BQ9P298 99 aa5.26□□□□□ -1.57
NUP88-211ENST00000575976 IGLV7-43P04211 117 aa5.25□□□□□ -1.57
NUP88-211ENST00000575976 DDTP30046 118 aa5.25□□□□□ -1.57
NUP88-211ENST00000575976 HIST1H4GQ99525 98 aa5.25□□□□□ -1.57
NUP88-211ENST00000575976 BCE1O60756 84 aa5.24□□□□□ -1.57
NUP88-211ENST00000575976 IGLV6-57P01721 117 aa5.24□□□□□ -1.57
NUP88-211ENST00000575976 S100A7L2Q5SY68 101 aa5.24□□□□□ -1.57
NUP88-211ENST00000575976 REG3GQ6UW15 175 aa5.24□□□□□ -1.57
NUP88-211ENST00000575976 LINC00518Q8N0U6 118 aa5.24□□□□□ -1.57
NUP88-211ENST00000575976 OR13C6PQ8NH95 151 aa5.24□□□□□ -1.57
NUP88-211ENST00000575976 TMEM126AQ9H061 195 aa5.24□□□□□ -1.57
NUP88-211ENST00000575976 PRO1933Q9H354 126 aa5.24□□□□□ -1.57
NUP88-211ENST00000575976 UQCR10Q9UDW1 63 aa5.24□□□□□ -1.57
NUP88-211ENST00000575976 PCP4L1A6NKN8 68 aa5.23□□□□□ -1.57
NUP88-211ENST00000575976 PRYO14603 147 aa5.23□□□□□ -1.57
NUP88-211ENST00000575976 LINC00337Q8N6G1 96 aa5.23□□□□□ -1.57
NUP88-211ENST00000575976 KCNQ1DNQ9H478 68 aa5.23□□□□□ -1.57
NUP88-211ENST00000575976 FLG2Q5D862 2391 aaPredicted RBP5.23□□□□□ -1.57
NUP88-211ENST00000575976 HMCN2Q8NDA2 5059 aa5.22□□□□□ -1.57
NUP88-211ENST00000575976 SPRR1AP35321 89 aa5.22□□□□□ -1.57
NUP88-211ENST00000575976 TAL2Q16559 108 aa5.22□□□□□ -1.57
NUP88-211ENST00000575976 FAM19A1Q7Z5A9 133 aa5.22□□□□□ -1.57
NUP88-211ENST00000575976 CEND1Q8N111 149 aa5.22□□□□□ -1.57
NUP88-211ENST00000575976 C12orf57Q99622 126 aa5.22□□□□□ -1.57
NUP88-211ENST00000575976 TRAV23DV6A0A075B6W5 121 aa5.21□□□□□ -1.58
NUP88-211ENST00000575976 A6NDN8 102 aa5.21□□□□□ -1.58
NUP88-211ENST00000575976 ZNF861PO60384 105 aa5.21□□□□□ -1.58
NUP88-211ENST00000575976 PRLHP81277 87 aa5.21□□□□□ -1.58
NUP88-211ENST00000575976 SPINK6Q6UWN8 80 aa5.21□□□□□ -1.58
NUP88-211ENST00000575976 TRAV13-2A0A0B4J235 113 aa5.2□□□□□ -1.58
NUP88-211ENST00000575976 KRTAP4-16G5E9R7 235 aaPredicted RBP5.2□□□□□ -1.58
NUP88-211ENST00000575976 RPL28P46779 137 aaKnown RBP5.2□□□□□ -1.58
NUP88-211ENST00000575976 UBE2AP49459 152 aa5.2□□□□□ -1.58
NUP88-211ENST00000575976 HSD52Q0P140 79 aa5.2□□□□□ -1.58
NUP88-211ENST00000575976 KRTAP13-1Q8IUC0 172 aa5.2□□□□□ -1.58
NUP88-211ENST00000575976 VPS13BQ7Z7G8 4022 aa5.19□□□□□ -1.58
NUP88-211ENST00000575976 ETDCA0A1B0GVM5 59 aa5.19□□□□□ -1.58
NUP88-211ENST00000575976 ZNF73O43830 326 aaPredicted RBP5.19□□□□□ -1.58
NUP88-211ENST00000575976 CFC1BP0CG36 223 aa5.19□□□□□ -1.58
NUP88-211ENST00000575976 CFC1P0CG37 223 aa5.19□□□□□ -1.58
NUP88-211ENST00000575976 FXYD2P54710 66 aa5.19□□□□□ -1.58
NUP88-211ENST00000575976 B5MCH6 92 aa5.18□□□□□ -1.58
NUP88-211ENST00000575976 H0Y9J4 135 aa5.18□□□□□ -1.58
NUP88-211ENST00000575976 DIRC1Q969H9 104 aa5.18□□□□□ -1.58
NUP88-211ENST00000575976 KRTAP29-1A8MX34 341 aaPredicted RBP5.17□□□□□ -1.58
NUP88-211ENST00000575976 TSTD3H0UI37 97 aa5.17□□□□□ -1.58
NUP88-211ENST00000575976 GHRHP01286 108 aa5.17□□□□□ -1.58
NUP88-211ENST00000575976 C6orf99Q4VX62 202 aa5.17□□□□□ -1.58
NUP88-211ENST00000575976 SMIM11BQ8TCY0 68 aa5.17□□□□□ -1.58
NUP88-211ENST00000575976 HIGD2AQ9BW72 106 aa5.17□□□□□ -1.58
NUP88-211ENST00000575976 A0A0B4J2C4 111 aa5.16□□□□□ -1.58
NUP88-211ENST00000575976 RPL13AP40429 203 aaKnown RBP5.16□□□□□ -1.58
NUP88-211ENST00000575976 HINT1P49773 126 aaPredicted RBP5.16□□□□□ -1.58
NUP88-211ENST00000575976 Q6ZRX8 168 aa5.16□□□□□ -1.58
NUP88-211ENST00000575976 SMCR5Q8TEV8 140 aa5.16□□□□□ -1.58
NUP88-211ENST00000575976 RAB37Q96AX2 223 aa5.16□□□□□ -1.58
NUP88-211ENST00000575976 BVES-AS1Q5T3Y7 98 aa5.15□□□□□ -1.59
NUP88-211ENST00000575976 Q9BRP9 147 aa5.15□□□□□ -1.59
NUP88-211ENST00000575976 NHP2Q9NX24 153 aaKnown RBP5.15□□□□□ -1.59
NUP88-211ENST00000575976 H7C2G1 150 aa5.14□□□□□ -1.59
NUP88-211ENST00000575976 ERC2-IT1O76042 136 aa5.14□□□□□ -1.59
NUP88-211ENST00000575976 KRTAP1-4P0C5Y4 121 aa5.14□□□□□ -1.59
NUP88-211ENST00000575976 COX7BP24311 80 aa5.14□□□□□ -1.59
NUP88-211ENST00000575976 ELOF1P60002 83 aaKnown RBP5.14□□□□□ -1.59
NUP88-211ENST00000575976 PRO1854Q9UHT4 67 aa5.14□□□□□ -1.59
NUP88-211ENST00000575976 PKHD1L1Q86WI1 4243 aa5.14□□□□□ -1.59
NUP88-211ENST00000575976 TRBV7-6A0A0J9YX20 115 aa5.13□□□□□ -1.59
NUP88-211ENST00000575976 K7ERJ3 54 aa5.13□□□□□ -1.59
NUP88-211ENST00000575976 RNF213Q63HN8 5207 aa5.13□□□□□ -1.59
NUP88-211ENST00000575976 A0A1B0GWB2 263 aa5.12□□□□□ -1.59
NUP88-211ENST00000575976 OXTP01178 125 aa5.12□□□□□ -1.59
NUP88-211ENST00000575976 LINC01600Q96MT4 127 aa5.12□□□□□ -1.59
NUP88-211ENST00000575976 ANAPC11Q9NYG5 84 aa5.12□□□□□ -1.59
NUP88-211ENST00000575976 M0R143 59 aa5.11□□□□□ -1.59
NUP88-211ENST00000575976 VAMP3Q15836 100 aa5.11□□□□□ -1.59
NUP88-211ENST00000575976 Q1RN00 199 aa5.11□□□□□ -1.59
NUP88-211ENST00000575976 SPRR4Q96PI1 79 aa5.11□□□□□ -1.59
NUP88-211ENST00000575976 PRR26Q8N8Z3 221 aa5.1□□□□□ -1.59
NUP88-211ENST00000575976 ST20-AS1Q8NBB2 130 aa5.1□□□□□ -1.59
NUP88-211ENST00000575976 FAT3Q8TDW7 4589 aa5.1□□□□□ -1.59
NUP88-211ENST00000575976 KRTAP9-9Q9BYP9 154 aa5.1□□□□□ -1.59
NUP88-211ENST00000575976 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
NUP88-211ENST00000575976 CDIP1Q9H305 208 aa5.1□□□□□ -1.59
NUP88-211ENST00000575976 DHRS4-AS1Q9P1J3 65 aa5.1□□□□□ -1.59
NUP88-211ENST00000575976 LRP1Q07954 4544 aaKnown RBP5.1□□□□□ -1.59
NUP88-211ENST00000575976 MT1HL1P0DM35 61 aa5.09□□□□□ -1.59
NUP88-211ENST00000575976 KRTAP10-8P60410 259 aa5.09□□□□□ -1.59
NUP88-211ENST00000575976 GAGE2AQ6NT46 116 aa5.09□□□□□ -1.59
NUP88-211ENST00000575976 LINC00575Q6W349 94 aa5.09□□□□□ -1.59
NUP88-211ENST00000575976 ZNF706Q9Y5V0 76 aaPredicted RBP5.09□□□□□ -1.59
NUP88-211ENST00000575976 A0A087X002 238 aa5.08□□□□□ -1.6
NUP88-211ENST00000575976 TSPAN13O95857 204 aa5.08□□□□□ -1.6
NUP88-211ENST00000575976 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
NUP88-211ENST00000575976 H0YGX0 51 aa5.07□□□□□ -1.6
NUP88-211ENST00000575976 TRIAP1O43715 76 aa5.07□□□□□ -1.6
NUP88-211ENST00000575976 SLC25A20O43772 301 aa5.07□□□□□ -1.6
NUP88-211ENST00000575976 CRYGAP11844 174 aa5.07□□□□□ -1.6
NUP88-211ENST00000575976 BATFQ16520 125 aa5.07□□□□□ -1.6
NUP88-211ENST00000575976 FAM229BQ4G0N7 80 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms