RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 M0R143 59 aa8.22□□□□□ -1.09
RPAIN-216ENST00000575599 CEND1Q8N111 149 aa8.22□□□□□ -1.09
RPAIN-216ENST00000575599 XAGE1AQ9HD64 81 aa8.22□□□□□ -1.09
RPAIN-216ENST00000575599 OXTP01178 125 aa8.21□□□□□ -1.1
RPAIN-216ENST00000575599 KRTAP7-1Q8IUC3 87 aa8.21□□□□□ -1.1
RPAIN-216ENST00000575599 PSORS1C2Q9UIG4 136 aa8.2□□□□□ -1.1
RPAIN-216ENST00000575599 HINT1P49773 126 aaPredicted RBP8.19□□□□□ -1.1
RPAIN-216ENST00000575599 UBE2BP63146 152 aa8.19□□□□□ -1.1
RPAIN-216ENST00000575599 BATFQ16520 125 aa8.18□□□□□ -1.1
RPAIN-216ENST00000575599 C1orf137Q5JT78 98 aa8.18□□□□□ -1.1
RPAIN-216ENST00000575599 SERTAD4-AS1Q5TG53 156 aa8.18□□□□□ -1.1
RPAIN-216ENST00000575599 SOSTDC1Q6X4U4 206 aa8.17□□□□□ -1.1
RPAIN-216ENST00000575599 KRTAP11-1Q8IUC1 163 aa8.17□□□□□ -1.1
RPAIN-216ENST00000575599 PPDPFQ9H3Y8 114 aa8.17□□□□□ -1.1
RPAIN-216ENST00000575599 LOC107984156A0A0G2JMH3 177 aa8.16□□□□□ -1.1
RPAIN-216ENST00000575599 A4D1N5 150 aa8.16□□□□□ -1.1
RPAIN-216ENST00000575599 SPINK6Q6UWN8 80 aa8.16□□□□□ -1.1
RPAIN-216ENST00000575599 ARL17AQ8IVW1 177 aa8.16□□□□□ -1.1
RPAIN-216ENST00000575599 A6NDN8 102 aa8.15□□□□□ -1.1
RPAIN-216ENST00000575599 FXYD2P54710 66 aa8.15□□□□□ -1.1
RPAIN-216ENST00000575599 BVES-AS1Q5T3Y7 98 aa8.15□□□□□ -1.1
RPAIN-216ENST00000575599 NKAPP1Q8N9T2 125 aa8.15□□□□□ -1.1
RPAIN-216ENST00000575599 RAB37Q96AX2 223 aa8.15□□□□□ -1.1
RPAIN-216ENST00000575599 NDUFC2O95298 119 aa8.14□□□□□ -1.11
RPAIN-216ENST00000575599 NHP2Q9NX24 153 aaKnown RBP8.14□□□□□ -1.11
RPAIN-216ENST00000575599 C22orf24Q9Y442 160 aa8.14□□□□□ -1.11
RPAIN-216ENST00000575599 KRTAP9-8Q9BYQ0 159 aa8.13□□□□□ -1.11
RPAIN-216ENST00000575599 IGLV7-43P04211 117 aa8.12□□□□□ -1.11
RPAIN-216ENST00000575599 OR13C6PQ8NH95 151 aa8.12□□□□□ -1.11
RPAIN-216ENST00000575599 PLA2G2DQ9UNK4 145 aa8.12□□□□□ -1.11
RPAIN-216ENST00000575599 TRAV13-2A0A0B4J235 113 aa8.11□□□□□ -1.11
RPAIN-216ENST00000575599 KRTAP9-7A8MTY7 169 aa8.11□□□□□ -1.11
RPAIN-216ENST00000575599 NCR3O14931 201 aa8.11□□□□□ -1.11
RPAIN-216ENST00000575599 LBHQ53QV2 105 aaPredicted RBP8.11□□□□□ -1.11
RPAIN-216ENST00000575599 S100A7L2Q5SY68 101 aa8.11□□□□□ -1.11
RPAIN-216ENST00000575599 REG3GQ6UW15 175 aa8.11□□□□□ -1.11
RPAIN-216ENST00000575599 MRPL55Q7Z7F7 128 aaKnown RBP8.11□□□□□ -1.11
RPAIN-216ENST00000575599 MT1HL1P0DM35 61 aa8.1□□□□□ -1.11
RPAIN-216ENST00000575599 CDIP1Q9H305 208 aa8.1□□□□□ -1.11
RPAIN-216ENST00000575599 A0A0B4J2C4 111 aa8.1□□□□□ -1.11
RPAIN-216ENST00000575599 TRBV10-2A0A0K0K1G8 114 aa8.1□□□□□ -1.11
RPAIN-216ENST00000575599 GAGE10A6NGK3 116 aa8.1□□□□□ -1.11
RPAIN-216ENST00000575599 M0R378 163 aa8.1□□□□□ -1.11
RPAIN-216ENST00000575599 CFC1BP0CG36 223 aa8.1□□□□□ -1.11
RPAIN-216ENST00000575599 CFC1P0CG37 223 aa8.1□□□□□ -1.11
RPAIN-216ENST00000575599 VPREB1P12018 145 aa8.1□□□□□ -1.11
RPAIN-216ENST00000575599 RPL37AP8A6NKH3 93 aa8.09□□□□□ -1.12
RPAIN-216ENST00000575599 LINC01600Q96MT4 127 aa8.09□□□□□ -1.12
RPAIN-216ENST00000575599 SNHG12Q9BXW3 62 aa8.09□□□□□ -1.12
RPAIN-216ENST00000575599 Q1RN00 199 aa8.08□□□□□ -1.12
RPAIN-216ENST00000575599 LINC00167Q96N53 147 aa8.08□□□□□ -1.12
RPAIN-216ENST00000575599 PRO1854Q9UHT4 67 aa8.08□□□□□ -1.12
RPAIN-216ENST00000575599 CBY1Q9Y3M2 126 aa8.08□□□□□ -1.12
RPAIN-216ENST00000575599 IGLV5-37A0A075B6J1 123 aa8.07□□□□□ -1.12
RPAIN-216ENST00000575599 IGKV2-28A0A075B6P5 120 aa8.07□□□□□ -1.12
RPAIN-216ENST00000575599 H7C2G1 150 aa8.07□□□□□ -1.12
RPAIN-216ENST00000575599 K7ERJ3 54 aa8.07□□□□□ -1.12
RPAIN-216ENST00000575599 IGKV2D-28P01615 120 aa8.07□□□□□ -1.12
RPAIN-216ENST00000575599 RPL13AP40429 203 aaKnown RBP8.07□□□□□ -1.12
RPAIN-216ENST00000575599 Q8NDZ9 215 aa8.07□□□□□ -1.12
RPAIN-216ENST00000575599 DIRC1Q969H9 104 aa8.07□□□□□ -1.12
RPAIN-216ENST00000575599 TMEM126AQ9H061 195 aa8.07□□□□□ -1.12
RPAIN-216ENST00000575599 COL5A1-AS1Q5SY13 56 aa8.06□□□□□ -1.12
RPAIN-216ENST00000575599 A0A1B0GWB2 263 aa8.05□□□□□ -1.12
RPAIN-216ENST00000575599 H0Y9J4 135 aa8.05□□□□□ -1.12
RPAIN-216ENST00000575599 LINC00337Q8N6G1 96 aa8.05□□□□□ -1.12
RPAIN-216ENST00000575599 TNXBP22105 4242 aa8.05□□□□□ -1.12
RPAIN-216ENST00000575599 TRBV10-3A0A0K0K1G6 114 aa8.03□□□□□ -1.12
RPAIN-216ENST00000575599 ZNF861PO60384 105 aa8.02□□□□□ -1.13
RPAIN-216ENST00000575599 BCE1O60756 84 aa8.02□□□□□ -1.13
RPAIN-216ENST00000575599 PSMB2P49721 201 aa8.02□□□□□ -1.13
RPAIN-216ENST00000575599 TRAV23DV6A0A075B6W5 121 aa8.01□□□□□ -1.13
RPAIN-216ENST00000575599 IGLV6-57P01721 117 aa8.01□□□□□ -1.13
RPAIN-216ENST00000575599 IGLV1-50A0A075B6I6 118 aa7.99□□□□□ -1.13
RPAIN-216ENST00000575599 TSPAN13O95857 204 aa7.99□□□□□ -1.13
RPAIN-216ENST00000575599 COX6CP09669 75 aa7.99□□□□□ -1.13
RPAIN-216ENST00000575599 SCGB1C2P0DMR2 95 aa7.99□□□□□ -1.13
RPAIN-216ENST00000575599 RPL28P46779 137 aaKnown RBP7.99□□□□□ -1.13
RPAIN-216ENST00000575599 KRTAP10-8P60410 259 aa7.99□□□□□ -1.13
RPAIN-216ENST00000575599 VAMP3Q15836 100 aa7.99□□□□□ -1.13
RPAIN-216ENST00000575599 SMIM11BQ8TCY0 68 aa7.99□□□□□ -1.13
RPAIN-216ENST00000575599 PRYO14603 147 aa7.98□□□□□ -1.13
RPAIN-216ENST00000575599 UBE2AP49459 152 aa7.98□□□□□ -1.13
RPAIN-216ENST00000575599 TAX1BP3O14907 124 aa7.97□□□□□ -1.13
RPAIN-216ENST00000575599 KRTAP1-4P0C5Y4 121 aa7.97□□□□□ -1.13
RPAIN-216ENST00000575599 KRTAP19-4Q3LI73 84 aa7.97□□□□□ -1.13
RPAIN-216ENST00000575599 PRR26Q8N8Z3 221 aa7.97□□□□□ -1.13
RPAIN-216ENST00000575599 KCNQ1DNQ9H478 68 aa7.97□□□□□ -1.13
RPAIN-216ENST00000575599 HMCN2Q8NDA2 5059 aa7.97□□□□□ -1.13
RPAIN-216ENST00000575599 C9orf118A6NHY6 69 aa7.97□□□□□ -1.13
RPAIN-216ENST00000575599 H3BUT2 72 aa7.97□□□□□ -1.13
RPAIN-216ENST00000575599 ZNF73O43830 326 aaPredicted RBP7.97□□□□□ -1.13
RPAIN-216ENST00000575599 LYRM7Q5U5X0 104 aa7.97□□□□□ -1.13
RPAIN-216ENST00000575599 ETDCA0A1B0GVM5 59 aa7.96□□□□□ -1.14
RPAIN-216ENST00000575599 PRLHP81277 87 aa7.96□□□□□ -1.14
RPAIN-216ENST00000575599 C6orf99Q4VX62 202 aa7.96□□□□□ -1.14
RPAIN-216ENST00000575599 FAM19A1Q7Z5A9 133 aa7.96□□□□□ -1.14
RPAIN-216ENST00000575599 NAA38Q9BRA0 125 aaKnown RBP7.96□□□□□ -1.14
RPAIN-216ENST00000575599 TRIAP1O43715 76 aa7.94□□□□□ -1.14
RPAIN-216ENST00000575599 SNCGO76070 127 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms