RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 GVQW2A0A096LPI5 108 aaPredicted RBP6.76□□□□□ -1.33
SMG6-213ENST00000573166 MP68P56378 58 aa6.76□□□□□ -1.33
SMG6-213ENST00000573166 CASC10Q5T4H9 136 aa6.76□□□□□ -1.33
SMG6-213ENST00000573166 C16orf90A8MZG2 172 aa6.76□□□□□ -1.33
SMG6-213ENST00000573166 FAM236DA0A1B0GTK5 79 aa6.75□□□□□ -1.33
SMG6-213ENST00000573166 FAM236CP0DP71 79 aa6.75□□□□□ -1.33
SMG6-213ENST00000573166 Q6ZQY7 126 aa6.75□□□□□ -1.33
SMG6-213ENST00000573166 DHRS4-AS1Q9P1J3 65 aa6.74□□□□□ -1.33
SMG6-213ENST00000573166 BPY2O14599 106 aa6.74□□□□□ -1.33
SMG6-213ENST00000573166 SERP2Q8N6R1 65 aa6.74□□□□□ -1.33
SMG6-213ENST00000573166 LINC00476Q8WZB0 136 aa6.74□□□□□ -1.33
SMG6-213ENST00000573166 C22orf24Q9Y442 160 aa6.74□□□□□ -1.33
SMG6-213ENST00000573166 REG3GQ6UW15 175 aa6.74□□□□□ -1.33
SMG6-213ENST00000573166 RPL28P46779 137 aaKnown RBP6.74□□□□□ -1.33
SMG6-213ENST00000573166 C1orf137Q5JT78 98 aa6.74□□□□□ -1.33
SMG6-213ENST00000573166 COX7CP15954 63 aa6.72□□□□□ -1.33
SMG6-213ENST00000573166 NDUFB1O75438 58 aa6.72□□□□□ -1.33
SMG6-213ENST00000573166 CHTF8P0CG12 524 aa6.72□□□□□ -1.33
SMG6-213ENST00000573166 A0A087WTM6 91 aa6.71□□□□□ -1.34
SMG6-213ENST00000573166 ZNF706Q9Y5V0 76 aaPredicted RBP6.71□□□□□ -1.34
SMG6-213ENST00000573166 LINC00337Q8N6G1 96 aa6.71□□□□□ -1.34
SMG6-213ENST00000573166 C15orf56Q8N910 161 aa6.7□□□□□ -1.34
SMG6-213ENST00000573166 NDUFS5O43920 106 aa6.7□□□□□ -1.34
SMG6-213ENST00000573166 FAM19A3Q7Z5A8 133 aa6.7□□□□□ -1.34
SMG6-213ENST00000573166 LINC00167Q96N53 147 aa6.69□□□□□ -1.34
SMG6-213ENST00000573166 Q6ZRP5 223 aa6.69□□□□□ -1.34
SMG6-213ENST00000573166 SCXQ7RTU7 201 aa6.68□□□□□ -1.34
SMG6-213ENST00000573166 PRLHP81277 87 aa6.68□□□□□ -1.34
SMG6-213ENST00000573166 KIAA0087Q14695 138 aa6.68□□□□□ -1.34
SMG6-213ENST00000573166 PRYO14603 147 aa6.68□□□□□ -1.34
SMG6-213ENST00000573166 Q6JHZ5 121 aa6.68□□□□□ -1.34
SMG6-213ENST00000573166 SOSTDC1Q6X4U4 206 aa6.68□□□□□ -1.34
SMG6-213ENST00000573166 IGLV9-49A0A0B4J1Y8 123 aa6.67□□□□□ -1.34
SMG6-213ENST00000573166 CCKP06307 115 aa6.67□□□□□ -1.34
SMG6-213ENST00000573166 CSMD2Q7Z408 3487 aa6.67□□□□□ -1.34
SMG6-213ENST00000573166 LITAFQ99732 161 aa6.67□□□□□ -1.34
SMG6-213ENST00000573166 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.67□□□□□ -1.34
SMG6-213ENST00000573166 PHF5AQ7RTV0 110 aaKnown RBP6.67□□□□□ -1.34
SMG6-213ENST00000573166 Q8N814 137 aa6.67□□□□□ -1.34
SMG6-213ENST00000573166 NDUFC1O43677 76 aa6.65□□□□□ -1.34
SMG6-213ENST00000573166 C9orf163Q8N9P6 203 aa6.65□□□□□ -1.34
SMG6-213ENST00000573166 FBN1P35555 2871 aaKnown RBP6.65□□□□□ -1.34
SMG6-213ENST00000573166 A0A087WYN8 130 aa6.65□□□□□ -1.35
SMG6-213ENST00000573166 LINC00336Q6ZUF6 198 aa6.65□□□□□ -1.35
SMG6-213ENST00000573166 FAM218AQ96MZ4 157 aa6.64□□□□□ -1.35
SMG6-213ENST00000573166 A0A087WVE0 104 aa6.64□□□□□ -1.35
SMG6-213ENST00000573166 TNP2Q05952 138 aa6.64□□□□□ -1.35
SMG6-213ENST00000573166 FAM168BA1KXE4 195 aa6.63□□□□□ -1.35
SMG6-213ENST00000573166 VWFP04275 2813 aa6.62□□□□□ -1.35
SMG6-213ENST00000573166 SMIM26A0A096LP01 95 aa6.62□□□□□ -1.35
SMG6-213ENST00000573166 SNURFQ9Y675 71 aa6.62□□□□□ -1.35
SMG6-213ENST00000573166 FAM229AH3BQW9 127 aa6.61□□□□□ -1.35
SMG6-213ENST00000573166 ATP5EP56381 51 aaPredicted RBP6.61□□□□□ -1.35
SMG6-213ENST00000573166 SEC61GP60059 68 aa6.61□□□□□ -1.35
SMG6-213ENST00000573166 H0Y9J4 135 aa6.61□□□□□ -1.35
SMG6-213ENST00000573166 SMCR5Q8TEV8 140 aa6.61□□□□□ -1.35
SMG6-213ENST00000573166 VPS13CQ709C8 3753 aa6.61□□□□□ -1.35
SMG6-213ENST00000573166 VPREB1P12018 145 aa6.61□□□□□ -1.35
SMG6-213ENST00000573166 FAM104AQ969W3 186 aa6.6□□□□□ -1.35
SMG6-213ENST00000573166 SERTAD4-AS1Q5TG53 156 aa6.6□□□□□ -1.35
SMG6-213ENST00000573166 LINC00575Q6W349 94 aa6.6□□□□□ -1.35
SMG6-213ENST00000573166 TRAV7A0A075B6U4 112 aa6.58□□□□□ -1.36
SMG6-213ENST00000573166 CNBPP62633 177 aaKnown RBP6.58□□□□□ -1.36
SMG6-213ENST00000573166 CIRBP-AS1Q8TBR5 109 aa6.58□□□□□ -1.36
SMG6-213ENST00000573166 KRTAP1-5Q9BYS1 174 aa6.58□□□□□ -1.36
SMG6-213ENST00000573166 PMAIP1Q13794 54 aa6.58□□□□□ -1.36
SMG6-213ENST00000573166 SPINK6Q6UWN8 80 aa6.58□□□□□ -1.36
SMG6-213ENST00000573166 TRBV7-7A0A0K0K1E9 115 aa6.58□□□□□ -1.36
SMG6-213ENST00000573166 Q9BRP9 147 aa6.58□□□□□ -1.36
SMG6-213ENST00000573166 CHKB-CPT1BH3BT56 60 aa6.57□□□□□ -1.36
SMG6-213ENST00000573166 C9orf129Q5T035 196 aaKnown RBP6.56□□□□□ -1.36
SMG6-213ENST00000573166 TENM3Q9P273 2699 aa6.56□□□□□ -1.36
SMG6-213ENST00000573166 LINC00846Q9NV44 126 aa6.56□□□□□ -1.36
SMG6-213ENST00000573166 TLX1NBP0CAT3 122 aa6.56□□□□□ -1.36
SMG6-213ENST00000573166 SMR3BP02814 79 aaPredicted RBP6.55□□□□□ -1.36
SMG6-213ENST00000573166 PRO0628Q9UI54 55 aa6.55□□□□□ -1.36
SMG6-213ENST00000573166 LCE6AA0A183 80 aa6.55□□□□□ -1.36
SMG6-213ENST00000573166 EPM2AB3EWF7 344 aa6.55□□□□□ -1.36
SMG6-213ENST00000573166 PRR4Q16378 134 aa6.55□□□□□ -1.36
SMG6-213ENST00000573166 A6NED7 52 aa6.54□□□□□ -1.36
SMG6-213ENST00000573166 Q6ZRX8 168 aa6.54□□□□□ -1.36
SMG6-213ENST00000573166 SERP1Q9Y6X1 66 aa6.54□□□□□ -1.36
SMG6-213ENST00000573166 BCE1O60756 84 aa6.54□□□□□ -1.36
SMG6-213ENST00000573166 IGKV4-1P06312 121 aa6.53□□□□□ -1.36
SMG6-213ENST00000573166 A0A1W2PNN7 141 aa6.53□□□□□ -1.36
SMG6-213ENST00000573166 IGLV6-57P01721 117 aa6.53□□□□□ -1.36
SMG6-213ENST00000573166 ELOF1P60002 83 aaKnown RBP6.53□□□□□ -1.36
SMG6-213ENST00000573166 RPL37AP61513 92 aaKnown RBP6.53□□□□□ -1.36
SMG6-213ENST00000573166 IGLV1-50A0A075B6I6 118 aa6.52□□□□□ -1.36
SMG6-213ENST00000573166 PLA2G1BP04054 148 aaKnown RBP6.52□□□□□ -1.37
SMG6-213ENST00000573166 WFDC13Q8IUB5 93 aa6.52□□□□□ -1.37
SMG6-213ENST00000573166 TRBV7-6A0A0J9YX20 115 aa6.51□□□□□ -1.37
SMG6-213ENST00000573166 KCNQ1DNQ9H478 68 aa6.5□□□□□ -1.37
SMG6-213ENST00000573166 C4orf26Q17RF5 130 aa6.49□□□□□ -1.37
SMG6-213ENST00000573166 PKD1L1Q8TDX9 2849 aa6.49□□□□□ -1.37
SMG6-213ENST00000573166 Q6ZVQ6 151 aa6.49□□□□□ -1.37
SMG6-213ENST00000573166 ST20-AS1Q8NBB2 130 aa6.49□□□□□ -1.37
SMG6-213ENST00000573166 CRYGAP11844 174 aa6.49□□□□□ -1.37
SMG6-213ENST00000573166 MOBPQ13875 183 aa6.49□□□□□ -1.37
SMG6-213ENST00000573166 PLA2G2DQ9UNK4 145 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms