RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 C2orf91Q6ZV80 131 aa6.06□□□□□ -1.44
GTF3C1-213ENST00000571886 IGKV2D-26A0A0A0MRZ7 120 aa6.05□□□□□ -1.44
GTF3C1-213ENST00000571886 HSD52Q0P140 79 aa6.05□□□□□ -1.44
GTF3C1-213ENST00000571886 SOSTDC1Q6X4U4 206 aa6.05□□□□□ -1.44
GTF3C1-213ENST00000571886 TTTY13Q9BZ97 58 aa6.05□□□□□ -1.44
GTF3C1-213ENST00000571886 LOC107984156A0A0G2JMH3 177 aa6.04□□□□□ -1.44
GTF3C1-213ENST00000571886 A0A0J9YXY3 114 aa6.04□□□□□ -1.44
GTF3C1-213ENST00000571886 TRBV10-3A0A0K0K1G6 114 aa6.04□□□□□ -1.44
GTF3C1-213ENST00000571886 NMUP48645 174 aa6.04□□□□□ -1.44
GTF3C1-213ENST00000571886 UBE2V1Q13404 147 aa6.04□□□□□ -1.44
GTF3C1-213ENST00000571886 KRTAP13-2Q52LG2 175 aa6.04□□□□□ -1.44
GTF3C1-213ENST00000571886 ARL17AQ8IVW1 177 aa6.04□□□□□ -1.44
GTF3C1-213ENST00000571886 LRP2P98164 4655 aa6.04□□□□□ -1.44
GTF3C1-213ENST00000571886 A6NDN8 102 aa6.03□□□□□ -1.44
GTF3C1-213ENST00000571886 TAX1BP3O14907 124 aa6.03□□□□□ -1.44
GTF3C1-213ENST00000571886 NPC2P61916 151 aa6.03□□□□□ -1.44
GTF3C1-213ENST00000571886 TAL2Q16559 108 aa6.03□□□□□ -1.44
GTF3C1-213ENST00000571886 KRTAP4-16G5E9R7 235 aaPredicted RBP6.02□□□□□ -1.45
GTF3C1-213ENST00000571886 SPRR1AP35321 89 aa6.02□□□□□ -1.45
GTF3C1-213ENST00000571886 RPL13AP40429 203 aaKnown RBP6.02□□□□□ -1.45
GTF3C1-213ENST00000571886 LITAFQ99732 161 aa6.02□□□□□ -1.45
GTF3C1-213ENST00000571886 KCNQ1DNQ9H478 68 aa6.02□□□□□ -1.45
GTF3C1-213ENST00000571886 PRYO14603 147 aa6.01□□□□□ -1.45
GTF3C1-213ENST00000571886 CRYGAP11844 174 aa6.01□□□□□ -1.45
GTF3C1-213ENST00000571886 HIGD2AQ9BW72 106 aa6.01□□□□□ -1.45
GTF3C1-213ENST00000571886 RNF213Q63HN8 5207 aa6□□□□□ -1.45
GTF3C1-213ENST00000571886 PCP2Q8IVA1 136 aa6□□□□□ -1.45
GTF3C1-213ENST00000571886 TYMSOSQ8TAI1 123 aa6□□□□□ -1.45
GTF3C1-213ENST00000571886 C9orf118A6NHY6 69 aa5.99□□□□□ -1.45
GTF3C1-213ENST00000571886 ZNF815PA8K554 130 aa5.99□□□□□ -1.45
GTF3C1-213ENST00000571886 TSPAN13O95857 204 aa5.99□□□□□ -1.45
GTF3C1-213ENST00000571886 LINC00337Q8N6G1 96 aa5.99□□□□□ -1.45
GTF3C1-213ENST00000571886 SMCR5Q8TEV8 140 aa5.99□□□□□ -1.45
GTF3C1-213ENST00000571886 LPAP08519 4548 aa5.98□□□□□ -1.45
GTF3C1-213ENST00000571886 TRBV10-2A0A0K0K1G8 114 aa5.98□□□□□ -1.45
GTF3C1-213ENST00000571886 NDUFC2O95298 119 aa5.98□□□□□ -1.45
GTF3C1-213ENST00000571886 VAMP3Q15836 100 aa5.98□□□□□ -1.45
GTF3C1-213ENST00000571886 C3orf22Q8N5N4 141 aa5.98□□□□□ -1.45
GTF3C1-213ENST00000571886 LINC00308Q8TCZ7 52 aa5.98□□□□□ -1.45
GTF3C1-213ENST00000571886 B5MCH6 92 aa5.97□□□□□ -1.45
GTF3C1-213ENST00000571886 ERC2-IT1O76042 136 aa5.97□□□□□ -1.45
GTF3C1-213ENST00000571886 IGLV6-57P01721 117 aa5.97□□□□□ -1.45
GTF3C1-213ENST00000571886 FAM229BQ4G0N7 80 aa5.97□□□□□ -1.45
GTF3C1-213ENST00000571886 SPRR4Q96PI1 79 aa5.97□□□□□ -1.45
GTF3C1-213ENST00000571886 SPANXB1Q9NS25 103 aaPredicted RBP5.97□□□□□ -1.45
GTF3C1-213ENST00000571886 ETDCA0A1B0GVM5 59 aa5.96□□□□□ -1.46
GTF3C1-213ENST00000571886 TIMM17BO60830 172 aa5.96□□□□□ -1.46
GTF3C1-213ENST00000571886 Q9BRP9 147 aa5.96□□□□□ -1.46
GTF3C1-213ENST00000571886 S100A7L2Q5SY68 101 aa5.95□□□□□ -1.46
GTF3C1-213ENST00000571886 GTF2H5Q6ZYL4 71 aa5.95□□□□□ -1.46
GTF3C1-213ENST00000571886 CEND1Q8N111 149 aa5.95□□□□□ -1.46
GTF3C1-213ENST00000571886 PPDPFQ9H3Y8 114 aa5.95□□□□□ -1.46
GTF3C1-213ENST00000571886 Q6ZVH6 145 aa5.94□□□□□ -1.46
GTF3C1-213ENST00000571886 TRAV23DV6A0A075B6W5 121 aa5.93□□□□□ -1.46
GTF3C1-213ENST00000571886 A0A1B0GWB2 263 aa5.93□□□□□ -1.46
GTF3C1-213ENST00000571886 PRR4Q16378 134 aa5.93□□□□□ -1.46
GTF3C1-213ENST00000571886 Q6ZRX8 168 aa5.92□□□□□ -1.46
GTF3C1-213ENST00000571886 LINC00304Q8N9R0 145 aa5.92□□□□□ -1.46
GTF3C1-213ENST00000571886 SPANXDQ9BXN6 97 aa5.92□□□□□ -1.46
GTF3C1-213ENST00000571886 SPANXCQ9NY87 97 aa5.92□□□□□ -1.46
GTF3C1-213ENST00000571886 A0A1W2PPM0 123 aa5.91□□□□□ -1.46
GTF3C1-213ENST00000571886 H3BUT2 72 aa5.91□□□□□ -1.46
GTF3C1-213ENST00000571886 K7EP34 96 aa5.91□□□□□ -1.46
GTF3C1-213ENST00000571886 ZNF73O43830 326 aaPredicted RBP5.91□□□□□ -1.46
GTF3C1-213ENST00000571886 FABP2P12104 132 aa5.91□□□□□ -1.46
GTF3C1-213ENST00000571886 FXYD2P54710 66 aa5.91□□□□□ -1.46
GTF3C1-213ENST00000571886 GAGE2AQ6NT46 116 aa5.91□□□□□ -1.46
GTF3C1-213ENST00000571886 SCGB1D4Q6XE38 83 aa5.91□□□□□ -1.46
GTF3C1-213ENST00000571886 OR13C6PQ8NH95 151 aa5.91□□□□□ -1.46
GTF3C1-213ENST00000571886 HIST1H4GQ99525 98 aa5.91□□□□□ -1.46
GTF3C1-213ENST00000571886 RETNLBQ9BQ08 111 aa5.91□□□□□ -1.46
GTF3C1-213ENST00000571886 LINC00483Q53H64 154 aa5.9□□□□□ -1.46
GTF3C1-213ENST00000571886 MUSTN1Q8IVN3 82 aa5.9□□□□□ -1.46
GTF3C1-213ENST00000571886 ST20-AS1Q8NBB2 130 aa5.9□□□□□ -1.46
GTF3C1-213ENST00000571886 ZNF706Q9Y5V0 76 aaPredicted RBP5.9□□□□□ -1.46
GTF3C1-213ENST00000571886 TMEM238LA0A1B0GVL6 79 aa5.89□□□□□ -1.47
GTF3C1-213ENST00000571886 A6NJY4 79 aa5.89□□□□□ -1.47
GTF3C1-213ENST00000571886 CBY1Q9Y3M2 126 aa5.89□□□□□ -1.47
GTF3C1-213ENST00000571886 Q8NBF4 154 aa5.87□□□□□ -1.47
GTF3C1-213ENST00000571886 SPCS1Q9Y6A9 102 aa5.87□□□□□ -1.47
GTF3C1-213ENST00000571886 IGLV9-49A0A0B4J1Y8 123 aa5.86□□□□□ -1.47
GTF3C1-213ENST00000571886 IFITM1P13164 125 aa5.86□□□□□ -1.47
GTF3C1-213ENST00000571886 C6orf99Q4VX62 202 aa5.86□□□□□ -1.47
GTF3C1-213ENST00000571886 OCIAD2Q56VL3 154 aa5.86□□□□□ -1.47
GTF3C1-213ENST00000571886 RAB37Q96AX2 223 aa5.86□□□□□ -1.47
GTF3C1-213ENST00000571886 NHP2Q9NX24 153 aaKnown RBP5.86□□□□□ -1.47
GTF3C1-213ENST00000571886 F8W1H4 67 aa5.85□□□□□ -1.47
GTF3C1-213ENST00000571886 K7ERU9 68 aa5.85□□□□□ -1.47
GTF3C1-213ENST00000571886 MOBPQ13875 183 aa5.85□□□□□ -1.47
GTF3C1-213ENST00000571886 ELOF1P60002 83 aaKnown RBP5.84□□□□□ -1.47
GTF3C1-213ENST00000571886 K7ERJ3 54 aa5.83□□□□□ -1.48
GTF3C1-213ENST00000571886 COX7BP24311 80 aa5.83□□□□□ -1.48
GTF3C1-213ENST00000571886 LYRM7Q5U5X0 104 aa5.83□□□□□ -1.48
GTF3C1-213ENST00000571886 SPAG11AQ6PDA7 123 aa5.83□□□□□ -1.48
GTF3C1-213ENST00000571886 C4orf48Q5BLP8 95 aa5.82□□□□□ -1.48
GTF3C1-213ENST00000571886 SSBP3-AS1Q7Z2R9 100 aa5.82□□□□□ -1.48
GTF3C1-213ENST00000571886 TRBV20-1A0A075B6N2 111 aa5.81□□□□□ -1.48
GTF3C1-213ENST00000571886 CFC1BP0CG36 223 aa5.81□□□□□ -1.48
GTF3C1-213ENST00000571886 CFC1P0CG37 223 aa5.81□□□□□ -1.48
GTF3C1-213ENST00000571886 SPRR1BP22528 89 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms