RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 PRR15LQ9BU68 103 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 DDX60Q8IY21 1712 aaKnown RBP2.07□□□□□ -2.08
CHD9-220ENST00000569794 FLNAP21333 2647 aaKnown RBP2.07□□□□□ -2.08
CHD9-220ENST00000569794 PATJQ8NI35 1801 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 PKD1L1Q8TDX9 2849 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 PTPRDP23468 1912 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 CHD3Q12873 2000 aaKnown RBP2.07□□□□□ -2.08
CHD9-220ENST00000569794 GBF1Q92538 1859 aa2.06□□□□□ -2.08
CHD9-220ENST00000569794 TRAV1-2A0A0B4J238 106 aa2.06□□□□□ -2.08
CHD9-220ENST00000569794 TRBV30A0A0K0K1B3 111 aa2.06□□□□□ -2.08
CHD9-220ENST00000569794 NCR3O14931 201 aa2.06□□□□□ -2.08
CHD9-220ENST00000569794 ACYP2P14621 99 aa2.06□□□□□ -2.08
CHD9-220ENST00000569794 PSENENQ9NZ42 101 aa2.06□□□□□ -2.08
CHD9-220ENST00000569794 LINC01558Q9Y6Z2 57 aa2.06□□□□□ -2.08
CHD9-220ENST00000569794 CENPEQ02224 2701 aa2.06□□□□□ -2.08
CHD9-220ENST00000569794 APC2O95996 2303 aa2.06□□□□□ -2.08
CHD9-220ENST00000569794 HIVEP3Q5T1R4 2406 aa2.06□□□□□ -2.08
CHD9-220ENST00000569794 CCDC168Q8NDH2 2452 aa2.06□□□□□ -2.08
CHD9-220ENST00000569794 MYH8P13535 1937 aa2.05□□□□□ -2.08
CHD9-220ENST00000569794 MYO7AQ13402 2215 aa2.05□□□□□ -2.08
CHD9-220ENST00000569794 ABCA4P78363 2273 aa2.05□□□□□ -2.08
CHD9-220ENST00000569794 LEPROTL1O95214 131 aa2.05□□□□□ -2.08
CHD9-220ENST00000569794 PCOTHQ58A44 107 aa2.05□□□□□ -2.08
CHD9-220ENST00000569794 Q96NJ1 140 aa2.05□□□□□ -2.08
CHD9-220ENST00000569794 COL5A1P20908 1838 aaPredicted RBP2.05□□□□□ -2.08
CHD9-220ENST00000569794 HMGN2P05204 90 aaKnown RBP2.04□□□□□ -2.08
CHD9-220ENST00000569794 PCDH15Q96QU1 1955 aa2.04□□□□□ -2.08
CHD9-220ENST00000569794 AHCTF1Q8WYP5 2266 aa2.03□□□□□ -2.08
CHD9-220ENST00000569794 TET1Q8NFU7 2136 aa2.03□□□□□ -2.08
CHD9-220ENST00000569794 CFDP00746 253 aaPredicted RBP2.03□□□□□ -2.08
CHD9-220ENST00000569794 MGPP08493 103 aa2.03□□□□□ -2.08
CHD9-220ENST00000569794 ARMS2P0C7Q2 107 aa2.03□□□□□ -2.08
CHD9-220ENST00000569794 SPINT3P49223 89 aa2.03□□□□□ -2.08
CHD9-220ENST00000569794 FDCSPQ8NFU4 85 aa2.03□□□□□ -2.08
CHD9-220ENST00000569794 SMIM4Q8WVI0 70 aa2.03□□□□□ -2.08
CHD9-220ENST00000569794 Q9Y3F1 56 aa2.03□□□□□ -2.08
CHD9-220ENST00000569794 CELSR2Q9HCU4 2923 aa2.03□□□□□ -2.08
CHD9-220ENST00000569794 ACACAQ13085 2346 aa2.02□□□□□ -2.09
CHD9-220ENST00000569794 FCGBPQ9Y6R7 5405 aaPredicted RBP2.02□□□□□ -2.09
CHD9-220ENST00000569794 ADGRG4Q8IZF6 3080 aa2.02□□□□□ -2.09
CHD9-220ENST00000569794 ESPL1Q14674 2120 aa2.02□□□□□ -2.09
CHD9-220ENST00000569794 IQCF6A8MYZ5 107 aa2.02□□□□□ -2.09
CHD9-220ENST00000569794 D6R8Y8 96 aa2.02□□□□□ -2.09
CHD9-220ENST00000569794 ZNF137PP52743 207 aa2.02□□□□□ -2.09
CHD9-220ENST00000569794 KRTAP12-1P59990 96 aa2.02□□□□□ -2.09
CHD9-220ENST00000569794 COX17Q14061 63 aa2.02□□□□□ -2.09
CHD9-220ENST00000569794 HMGN3Q15651 99 aa2.02□□□□□ -2.09
CHD9-220ENST00000569794 MUSTN1Q8IVN3 82 aa2.02□□□□□ -2.09
CHD9-220ENST00000569794 CRYBG3Q68DQ2 2970 aa2.02□□□□□ -2.09
CHD9-220ENST00000569794 COL6A6A6NMZ7 2263 aa2.02□□□□□ -2.09
CHD9-220ENST00000569794 COL6A5A8TX70 2615 aa2.02□□□□□ -2.09
CHD9-220ENST00000569794 BOD1L1Q8NFC6 3051 aa2.02□□□□□ -2.09
CHD9-220ENST00000569794 C18orf32Q8TCD1 76 aa2.01□□□□□ -2.09
CHD9-220ENST00000569794 APCP25054 2843 aa2□□□□□ -2.09
CHD9-220ENST00000569794 MYMXA0A1B0GTQ4 84 aa2□□□□□ -2.09
CHD9-220ENST00000569794 Q5BKY6 102 aa2□□□□□ -2.09
CHD9-220ENST00000569794 LINC01600Q96MT4 127 aa2□□□□□ -2.09
CHD9-220ENST00000569794 PSME4Q14997 1843 aa2□□□□□ -2.09
CHD9-220ENST00000569794 MGAQ8IWI9 3026 aa2□□□□□ -2.09
CHD9-220ENST00000569794 ANKRD36CQ5JPF3 1778 aa2□□□□□ -2.09
CHD9-220ENST00000569794 TLN2Q9Y4G6 2542 aa1.99□□□□□ -2.09
CHD9-220ENST00000569794 PARP14Q460N5 1801 aa1.99□□□□□ -2.09
CHD9-220ENST00000569794 CACNA1EQ15878 2313 aa1.99□□□□□ -2.09
CHD9-220ENST00000569794 A0A087WVE0 104 aa1.99□□□□□ -2.09
CHD9-220ENST00000569794 PLGLAQ15195 96 aa1.99□□□□□ -2.09
CHD9-220ENST00000569794 C10orf99Q6UWK7 81 aa1.99□□□□□ -2.09
CHD9-220ENST00000569794 LINC00575Q6W349 94 aa1.99□□□□□ -2.09
CHD9-220ENST00000569794 PI4KAP42356 2102 aa1.99□□□□□ -2.09
CHD9-220ENST00000569794 TANC1Q9C0D5 1861 aa1.99□□□□□ -2.09
CHD9-220ENST00000569794 CELSR1Q9NYQ6 3014 aa1.99□□□□□ -2.09
CHD9-220ENST00000569794 INTS1Q8N201 2190 aaKnown RBP1.98□□□□□ -2.09
CHD9-220ENST00000569794 TGP01266 2768 aa1.98□□□□□ -2.09
CHD9-220ENST00000569794 CEBPZOSA8MTT3 80 aa1.98□□□□□ -2.09
CHD9-220ENST00000569794 SMIM13P0DJ93 91 aa1.98□□□□□ -2.09
CHD9-220ENST00000569794 ATMQ13315 3056 aa1.98□□□□□ -2.09
CHD9-220ENST00000569794 MEGF8Q7Z7M0 2845 aa1.98□□□□□ -2.09
CHD9-220ENST00000569794 CSPG4Q6UVK1 2322 aa1.97□□□□□ -2.09
CHD9-220ENST00000569794 AKAP9Q99996 3911 aa1.97□□□□□ -2.09
CHD9-220ENST00000569794 SDK1Q7Z5N4 2213 aa1.97□□□□□ -2.09
CHD9-220ENST00000569794 NBASA2RRP1 2371 aa1.97□□□□□ -2.09
CHD9-220ENST00000569794 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.97□□□□□ -2.09
CHD9-220ENST00000569794 ZCCHC13Q8WW36 166 aaKnown RBP1.97□□□□□ -2.09
CHD9-220ENST00000569794 MED12Q93074 2177 aa1.97□□□□□ -2.09
CHD9-220ENST00000569794 CSMD2Q7Z408 3487 aa1.97□□□□□ -2.09
CHD9-220ENST00000569794 SPTBN1Q01082 2364 aaKnown RBP1.96□□□□□ -2.09
CHD9-220ENST00000569794 DOCK2Q92608 1830 aa1.96□□□□□ -2.1
CHD9-220ENST00000569794 SPINK13Q1W4C9 94 aa1.96□□□□□ -2.1
CHD9-220ENST00000569794 TNRC6BQ9UPQ9 1833 aaKnown RBP1.96□□□□□ -2.1
CHD9-220ENST00000569794 EXPH5Q8NEV8 1989 aa1.96□□□□□ -2.1
CHD9-220ENST00000569794 MED13LQ71F56 2210 aa1.95□□□□□ -2.1
CHD9-220ENST00000569794 RYR3Q15413 4870 aa1.95□□□□□ -2.1
CHD9-220ENST00000569794 LY6G6CO95867 125 aa1.95□□□□□ -2.1
CHD9-220ENST00000569794 SPTBP11277 2137 aa1.95□□□□□ -2.1
CHD9-220ENST00000569794 GCHFRP30047 84 aa1.95□□□□□ -2.1
CHD9-220ENST00000569794 C6orf201Q7Z4U5 140 aa1.95□□□□□ -2.1
CHD9-220ENST00000569794 DEFB107AQ8IZN7 70 aa1.95□□□□□ -2.1
CHD9-220ENST00000569794 SMIM11BQ8TCY0 68 aa1.95□□□□□ -2.1
CHD9-220ENST00000569794 A0A1B0GUL6 1792 aa1.95□□□□□ -2.1
CHD9-220ENST00000569794 VPS13CQ709C8 3753 aa1.95□□□□□ -2.1
CHD9-220ENST00000569794 BIRC6Q9NR09 4857 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms