RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 LCE4AQ5TA78 99 aa5.06□□□□□ -1.6
ATXN3-250ENST00000568290 Q6ZTC4 211 aa5.06□□□□□ -1.6
ATXN3-250ENST00000568290 C15orf56Q8N910 161 aa5.06□□□□□ -1.6
ATXN3-250ENST00000568290 ZFYVE26Q68DK2 2539 aa5.06□□□□□ -1.6
ATXN3-250ENST00000568290 IGLV5-48A0A075B6I7 105 aa5.05□□□□□ -1.6
ATXN3-250ENST00000568290 ESRGQ1W209 222 aa5.05□□□□□ -1.6
ATXN3-250ENST00000568290 KRTAP26-1Q6PEX3 210 aa5.05□□□□□ -1.6
ATXN3-250ENST00000568290 SVEP1Q4LDE5 3571 aa5.05□□□□□ -1.6
ATXN3-250ENST00000568290 JMJD1CQ15652 2540 aa5.04□□□□□ -1.6
ATXN3-250ENST00000568290 SETXQ7Z333 2677 aaKnown RBP5.04□□□□□ -1.6
ATXN3-250ENST00000568290 Q6ZRP5 223 aa5.03□□□□□ -1.6
ATXN3-250ENST00000568290 Q6ZRX8 168 aa5.03□□□□□ -1.6
ATXN3-250ENST00000568290 FAM19A5Q7Z5A7 132 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-250ENST00000568290 Q8NDZ9 215 aa5.03□□□□□ -1.6
ATXN3-250ENST00000568290 VPS13CQ709C8 3753 aa5.03□□□□□ -1.6
ATXN3-250ENST00000568290 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
ATXN3-250ENST00000568290 IGLV1-50A0A075B6I6 118 aa5.01□□□□□ -1.61
ATXN3-250ENST00000568290 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
ATXN3-250ENST00000568290 C7orf33Q8WU49 177 aa5.01□□□□□ -1.61
ATXN3-250ENST00000568290 SPRR1AP35321 89 aa5□□□□□ -1.61
ATXN3-250ENST00000568290 C1orf137Q5JT78 98 aa5□□□□□ -1.61
ATXN3-250ENST00000568290 MRPL55Q7Z7F7 128 aaKnown RBP5□□□□□ -1.61
ATXN3-250ENST00000568290 Q8NBF4 154 aa5□□□□□ -1.61
ATXN3-250ENST00000568290 MTORP42345 2549 aa4.99□□□□□ -1.61
ATXN3-250ENST00000568290 PDZD2O15018 2839 aa4.99□□□□□ -1.61
ATXN3-250ENST00000568290 NDUFB1O75438 58 aa4.99□□□□□ -1.61
ATXN3-250ENST00000568290 UBE2BP63146 152 aa4.99□□□□□ -1.61
ATXN3-250ENST00000568290 REG3GQ6UW15 175 aa4.99□□□□□ -1.61
ATXN3-250ENST00000568290 TMEM254Q8TBM7 123 aa4.99□□□□□ -1.61
ATXN3-250ENST00000568290 LINC00474Q9P2X8 69 aa4.99□□□□□ -1.61
ATXN3-250ENST00000568290 UNC79Q9P2D8 2635 aa4.99□□□□□ -1.61
ATXN3-250ENST00000568290 SETD2Q9BYW2 2564 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-250ENST00000568290 H7BZZ5 65 aa4.98□□□□□ -1.61
ATXN3-250ENST00000568290 DEFB105AQ8NG35 78 aa4.98□□□□□ -1.61
ATXN3-250ENST00000568290 SPRR4Q96PI1 79 aa4.98□□□□□ -1.61
ATXN3-250ENST00000568290 NF1P21359 2839 aa4.97□□□□□ -1.61
ATXN3-250ENST00000568290 ZFHX3Q15911 3703 aa4.97□□□□□ -1.61
ATXN3-250ENST00000568290 PSCAO43653 123 aa4.97□□□□□ -1.61
ATXN3-250ENST00000568290 KRTAP10-11P60412 298 aa4.97□□□□□ -1.61
ATXN3-250ENST00000568290 Q8N377 158 aa4.97□□□□□ -1.61
ATXN3-250ENST00000568290 RETNQ9HD89 108 aa4.97□□□□□ -1.61
ATXN3-250ENST00000568290 IGKV4-1P06312 121 aa4.96□□□□□ -1.62
ATXN3-250ENST00000568290 TM2D3Q9BRN9 247 aa4.96□□□□□ -1.62
ATXN3-250ENST00000568290 LINC00588Q9Y4M8 146 aa4.96□□□□□ -1.62
ATXN3-250ENST00000568290 ACANP16112 2415 aa4.96□□□□□ -1.62
ATXN3-250ENST00000568290 NOTCH2Q04721 2471 aa4.96□□□□□ -1.62
ATXN3-250ENST00000568290 KMT2BQ9UMN6 2715 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-250ENST00000568290 KRTAP4-8A0A0G2JLE6 195 aa4.95□□□□□ -1.62
ATXN3-250ENST00000568290 C16orf90A8MZG2 172 aa4.95□□□□□ -1.62
ATXN3-250ENST00000568290 H0Y9J4 135 aa4.95□□□□□ -1.62
ATXN3-250ENST00000568290 H3BPC8 53 aa4.95□□□□□ -1.62
ATXN3-250ENST00000568290 CNBPP62633 177 aaKnown RBP4.95□□□□□ -1.62
ATXN3-250ENST00000568290 FN1P02751 2386 aaKnown RBP4.95□□□□□ -1.62
ATXN3-250ENST00000568290 AKAP9Q99996 3911 aa4.94□□□□□ -1.62
ATXN3-250ENST00000568290 EPM2AB3EWF7 344 aa4.94□□□□□ -1.62
ATXN3-250ENST00000568290 KRTAP4-16G5E9R7 235 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-250ENST00000568290 MP68P56378 58 aa4.94□□□□□ -1.62
ATXN3-250ENST00000568290 SERTAD4-AS1Q5TG53 156 aa4.94□□□□□ -1.62
ATXN3-250ENST00000568290 KRTAP3-1Q9BYR8 98 aa4.94□□□□□ -1.62
ATXN3-250ENST00000568290 GCN1Q92616 2671 aaKnown RBP4.94□□□□□ -1.62
ATXN3-250ENST00000568290 IGLV8-61A0A075B6I0 122 aa4.93□□□□□ -1.62
ATXN3-250ENST00000568290 C3orf84H3BNL1 204 aa4.93□□□□□ -1.62
ATXN3-250ENST00000568290 M0R2N4 97 aa4.93□□□□□ -1.62
ATXN3-250ENST00000568290 SCXQ7RTU7 201 aa4.93□□□□□ -1.62
ATXN3-250ENST00000568290 UBE2DNLQ8IWF7 75 aa4.93□□□□□ -1.62
ATXN3-250ENST00000568290 OCR1Q9BZK8 76 aa4.93□□□□□ -1.62
ATXN3-250ENST00000568290 A0A0U1RQV1 116 aa4.92□□□□□ -1.62
ATXN3-250ENST00000568290 WWC2-AS2Q96NR7 200 aa4.92□□□□□ -1.62
ATXN3-250ENST00000568290 B9D2Q9BPU9 175 aa4.92□□□□□ -1.62
ATXN3-250ENST00000568290 SNURFQ9Y675 71 aa4.92□□□□□ -1.62
ATXN3-250ENST00000568290 HCG22E2RYF7 251 aa4.91□□□□□ -1.62
ATXN3-250ENST00000568290 UBE2AP49459 152 aa4.91□□□□□ -1.62
ATXN3-250ENST00000568290 RPL37AP61513 92 aaKnown RBP4.91□□□□□ -1.62
ATXN3-250ENST00000568290 KRTAP24-1Q3LI83 254 aa4.91□□□□□ -1.62
ATXN3-250ENST00000568290 V9GYY9 64 aa4.91□□□□□ -1.62
ATXN3-250ENST00000568290 TENM4Q6N022 2769 aa4.9□□□□□ -1.62
ATXN3-250ENST00000568290 A0A1W2PNM2 257 aa4.9□□□□□ -1.63
ATXN3-250ENST00000568290 KRTAP10-2P60368 255 aa4.9□□□□□ -1.63
ATXN3-250ENST00000568290 Q9BRP9 147 aa4.9□□□□□ -1.63
ATXN3-250ENST00000568290 CYSTM1Q9H1C7 97 aa4.9□□□□□ -1.63
ATXN3-250ENST00000568290 ITPR2Q14571 2701 aa4.9□□□□□ -1.63
ATXN3-250ENST00000568290 FASNP49327 2511 aaKnown RBP4.9□□□□□ -1.63
ATXN3-250ENST00000568290 LCE6AA0A183 80 aa4.89□□□□□ -1.63
ATXN3-250ENST00000568290 hDV103S1A0JD37 113 aa4.89□□□□□ -1.63
ATXN3-250ENST00000568290 LINC00476Q8WZB0 136 aa4.89□□□□□ -1.63
ATXN3-250ENST00000568290 ZNF706Q9Y5V0 76 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-250ENST00000568290 HELZ2Q9BYK8 2649 aaKnown RBP4.88□□□□□ -1.63
ATXN3-250ENST00000568290 NSD1Q96L73 2696 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-250ENST00000568290 SPRR1BP22528 89 aa4.88□□□□□ -1.63
ATXN3-250ENST00000568290 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
ATXN3-250ENST00000568290 TEP1Q99973 2627 aaKnown RBP4.88□□□□□ -1.63
ATXN3-250ENST00000568290 NBEAL2Q6ZNJ1 2754 aa4.87□□□□□ -1.63
ATXN3-250ENST00000568290 CSMD2Q7Z408 3487 aa4.87□□□□□ -1.63
ATXN3-250ENST00000568290 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-250ENST00000568290 NUPR2A6NF83 97 aa4.87□□□□□ -1.63
ATXN3-250ENST00000568290 SMIM29Q86T20 159 aa4.87□□□□□ -1.63
ATXN3-250ENST00000568290 PRO0628Q9UI54 55 aa4.87□□□□□ -1.63
ATXN3-250ENST00000568290 NIPBLQ6KC79 2804 aaeCLIP4.87□□□□□ -1.63
ATXN3-250ENST00000568290 Q5XG85 94 aa4.86□□□□□ -1.63
ATXN3-250ENST00000568290 ANK3Q12955 4377 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms