RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 HIST1H4GQ99525 98 aa10.93□□□□□ -0.66
COMMD4-222ENST00000568034 UQCR10Q9UDW1 63 aa10.93□□□□□ -0.66
COMMD4-222ENST00000568034 A4D1N5 150 aa10.92□□□□□ -0.66
COMMD4-222ENST00000568034 TRAV23DV6A0A075B6W5 121 aa10.9□□□□□ -0.66
COMMD4-222ENST00000568034 PRLHP81277 87 aa10.9□□□□□ -0.66
COMMD4-222ENST00000568034 FAM19A1Q7Z5A9 133 aa10.9□□□□□ -0.66
COMMD4-222ENST00000568034 OR13C6PQ8NH95 151 aa10.89□□□□□ -0.67
COMMD4-222ENST00000568034 H0Y9J4 135 aa10.88□□□□□ -0.67
COMMD4-222ENST00000568034 RPL28P46779 137 aaKnown RBP10.88□□□□□ -0.67
COMMD4-222ENST00000568034 UBE2AP49459 152 aa10.88□□□□□ -0.67
COMMD4-222ENST00000568034 TAL2Q16559 108 aa10.88□□□□□ -0.67
COMMD4-222ENST00000568034 DIRC1Q969H9 104 aa10.87□□□□□ -0.67
COMMD4-222ENST00000568034 TNXBP22105 4242 aa10.86□□□□□ -0.67
COMMD4-222ENST00000568034 ZNF73O43830 326 aaPredicted RBP10.86□□□□□ -0.67
COMMD4-222ENST00000568034 CEND1Q8N111 149 aa10.86□□□□□ -0.67
COMMD4-222ENST00000568034 TRAV13-2A0A0B4J235 113 aa10.85□□□□□ -0.67
COMMD4-222ENST00000568034 B5MCH6 92 aa10.85□□□□□ -0.67
COMMD4-222ENST00000568034 ETDCA0A1B0GVM5 59 aa10.84□□□□□ -0.67
COMMD4-222ENST00000568034 A6NDN8 102 aa10.84□□□□□ -0.67
COMMD4-222ENST00000568034 HSD52Q0P140 79 aa10.84□□□□□ -0.67
COMMD4-222ENST00000568034 KRTAP1-4P0C5Y4 121 aa10.83□□□□□ -0.68
COMMD4-222ENST00000568034 FXYD2P54710 66 aa10.83□□□□□ -0.68
COMMD4-222ENST00000568034 CBY1Q9Y3M2 126 aa10.83□□□□□ -0.68
COMMD4-222ENST00000568034 M0R143 59 aa10.82□□□□□ -0.68
COMMD4-222ENST00000568034 CFC1BP0CG36 223 aa10.82□□□□□ -0.68
COMMD4-222ENST00000568034 CFC1P0CG37 223 aa10.82□□□□□ -0.68
COMMD4-222ENST00000568034 KRTAP29-1A8MX34 341 aaPredicted RBP10.81□□□□□ -0.68
COMMD4-222ENST00000568034 Q6ZRX8 168 aa10.81□□□□□ -0.68
COMMD4-222ENST00000568034 SMCR5Q8TEV8 140 aa10.81□□□□□ -0.68
COMMD4-222ENST00000568034 C6orf99Q4VX62 202 aa10.8□□□□□ -0.68
COMMD4-222ENST00000568034 SMIM11BQ8TCY0 68 aa10.8□□□□□ -0.68
COMMD4-222ENST00000568034 Q9BRP9 147 aa10.8□□□□□ -0.68
COMMD4-222ENST00000568034 HIGD2AQ9BW72 106 aa10.8□□□□□ -0.68
COMMD4-222ENST00000568034 A0A0B4J2C4 111 aa10.79□□□□□ -0.68
COMMD4-222ENST00000568034 OXTP01178 125 aa10.79□□□□□ -0.68
COMMD4-222ENST00000568034 RPL13AP40429 203 aaKnown RBP10.78□□□□□ -0.68
COMMD4-222ENST00000568034 CTAG1AP78358 180 aa10.78□□□□□ -0.68
COMMD4-222ENST00000568034 LINC01600Q96MT4 127 aa10.77□□□□□ -0.69
COMMD4-222ENST00000568034 ERC2-IT1O76042 136 aa10.76□□□□□ -0.69
COMMD4-222ENST00000568034 MT1HL1P0DM35 61 aa10.76□□□□□ -0.69
COMMD4-222ENST00000568034 ELOF1P60002 83 aaKnown RBP10.76□□□□□ -0.69
COMMD4-222ENST00000568034 TMEM238LA0A1B0GVL6 79 aa10.75□□□□□ -0.69
COMMD4-222ENST00000568034 A6NJY4 79 aa10.75□□□□□ -0.69
COMMD4-222ENST00000568034 TRBV7-6A0A0J9YX20 115 aa10.74□□□□□ -0.69
COMMD4-222ENST00000568034 HINT1P49773 126 aaPredicted RBP10.74□□□□□ -0.69
COMMD4-222ENST00000568034 HERC1Q15751 4861 aa10.74□□□□□ -0.69
COMMD4-222ENST00000568034 COX7BP24311 80 aa10.73□□□□□ -0.69
COMMD4-222ENST00000568034 BATFQ16520 125 aa10.73□□□□□ -0.69
COMMD4-222ENST00000568034 RAB37Q96AX2 223 aa10.73□□□□□ -0.69
COMMD4-222ENST00000568034 A0A1B0GWB2 263 aa10.72□□□□□ -0.69
COMMD4-222ENST00000568034 BVES-AS1Q5T3Y7 98 aa10.72□□□□□ -0.69
COMMD4-222ENST00000568034 SPRR4Q96PI1 79 aa10.72□□□□□ -0.69
COMMD4-222ENST00000568034 SNHG12Q9BXW3 62 aa10.72□□□□□ -0.69
COMMD4-222ENST00000568034 NHP2Q9NX24 153 aaKnown RBP10.71□□□□□ -0.69
COMMD4-222ENST00000568034 ANAPC11Q9NYG5 84 aa10.71□□□□□ -0.69
COMMD4-222ENST00000568034 K7ERJ3 54 aa10.7□□□□□ -0.7
COMMD4-222ENST00000568034 KRTAP10-8P60410 259 aa10.7□□□□□ -0.7
COMMD4-222ENST00000568034 PRR26Q8N8Z3 221 aa10.7□□□□□ -0.7
COMMD4-222ENST00000568034 DMBT1Q9UGM3 2413 aaPredicted RBP10.69□□□□□ -0.7
COMMD4-222ENST00000568034 H7C2G1 150 aa10.69□□□□□ -0.7
COMMD4-222ENST00000568034 COL5A1-AS1Q5SY13 56 aa10.69□□□□□ -0.7
COMMD4-222ENST00000568034 PRO1854Q9UHT4 67 aa10.69□□□□□ -0.7
COMMD4-222ENST00000568034 A0A087X002 238 aa10.68□□□□□ -0.7
COMMD4-222ENST00000568034 DHRS4-AS1Q9P1J3 65 aa10.68□□□□□ -0.7
COMMD4-222ENST00000568034 ZNF706Q9Y5V0 76 aaPredicted RBP10.67□□□□□ -0.7
COMMD4-222ENST00000568034 J3QL48 77 aa10.66□□□□□ -0.7
COMMD4-222ENST00000568034 FAM229BQ4G0N7 80 aa10.66□□□□□ -0.7
COMMD4-222ENST00000568034 LINC00483Q53H64 154 aa10.66□□□□□ -0.7
COMMD4-222ENST00000568034 ST20-AS1Q8NBB2 130 aa10.66□□□□□ -0.7
COMMD4-222ENST00000568034 KRTAP13-2Q52LG2 175 aa10.64□□□□□ -0.71
COMMD4-222ENST00000568034 VAMP3Q15836 100 aa10.63□□□□□ -0.71
COMMD4-222ENST00000568034 LINC00575Q6W349 94 aa10.63□□□□□ -0.71
COMMD4-222ENST00000568034 CRYGAP11844 174 aa10.62□□□□□ -0.71
COMMD4-222ENST00000568034 Q1RN00 199 aa10.62□□□□□ -0.71
COMMD4-222ENST00000568034 GAGE2AQ6NT46 116 aa10.62□□□□□ -0.71
COMMD4-222ENST00000568034 TSPAN13O95857 204 aa10.61□□□□□ -0.71
COMMD4-222ENST00000568034 TRIAP1O43715 76 aa10.6□□□□□ -0.71
COMMD4-222ENST00000568034 SPRR1BP22528 89 aa10.59□□□□□ -0.71
COMMD4-222ENST00000568034 C3orf22Q8N5N4 141 aa10.59□□□□□ -0.71
COMMD4-222ENST00000568034 LINC01547P58512 204 aaPredicted RBP10.58□□□□□ -0.72
COMMD4-222ENST00000568034 FAM218AQ96MZ4 157 aa10.58□□□□□ -0.72
COMMD4-222ENST00000568034 A0A1B0GV90 55 aa10.57□□□□□ -0.72
COMMD4-222ENST00000568034 IGLV5-48A0A075B6I7 105 aa10.56□□□□□ -0.72
COMMD4-222ENST00000568034 hADV29S1A0JD25 119 aa10.55□□□□□ -0.72
COMMD4-222ENST00000568034 H0YGX0 51 aa10.55□□□□□ -0.72
COMMD4-222ENST00000568034 SLC25A20O43772 301 aa10.55□□□□□ -0.72
COMMD4-222ENST00000568034 TYMSOSQ8TAI1 123 aa10.55□□□□□ -0.72
COMMD4-222ENST00000568034 Q6ZQY7 126 aa10.53□□□□□ -0.72
COMMD4-222ENST00000568034 TEX49A0A1B0GTD5 131 aa10.51□□□□□ -0.73
COMMD4-222ENST00000568034 PSMB2P49721 201 aa10.51□□□□□ -0.73
COMMD4-222ENST00000568034 SMIM29Q86T20 159 aa10.51□□□□□ -0.73
COMMD4-222ENST00000568034 Q8N377 158 aa10.51□□□□□ -0.73
COMMD4-222ENST00000568034 DEFB105AQ8NG35 78 aa10.51□□□□□ -0.73
COMMD4-222ENST00000568034 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.5□□□□□ -0.73
COMMD4-222ENST00000568034 CLEC2BQ92478 149 aa10.5□□□□□ -0.73
COMMD4-222ENST00000568034 IGLV9-49A0A0B4J1Y8 123 aa10.49□□□□□ -0.73
COMMD4-222ENST00000568034 A0A1B0GX51 115 aa10.48□□□□□ -0.73
COMMD4-222ENST00000568034 MOBPQ13875 183 aa10.48□□□□□ -0.73
COMMD4-222ENST00000568034 HMCN2Q8NDA2 5059 aa10.46□□□□□ -0.73
COMMD4-222ENST00000568034 COX6CP09669 75 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms