RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 IGKV3D-7A0A0C4DH55 119 aa8.68□□□□□ -1.02
LINC00563-201ENST00000566370 CASC10Q5T4H9 136 aa8.68□□□□□ -1.02
LINC00563-201ENST00000566370 MRPL55Q7Z7F7 128 aaKnown RBP8.68□□□□□ -1.02
LINC00563-201ENST00000566370 PKD1L1Q8TDX9 2849 aa8.67□□□□□ -1.02
LINC00563-201ENST00000566370 IGLV1-50A0A075B6I6 118 aa8.67□□□□□ -1.02
LINC00563-201ENST00000566370 CNBPP62633 177 aaKnown RBP8.67□□□□□ -1.02
LINC00563-201ENST00000566370 MDFIQ99750 246 aa8.67□□□□□ -1.02
LINC00563-201ENST00000566370 NOTCH1P46531 2555 aa8.67□□□□□ -1.02
LINC00563-201ENST00000566370 Q6ZRX8 168 aa8.66□□□□□ -1.02
LINC00563-201ENST00000566370 TRBV7-4A0A0J9YYF1 115 aa8.65□□□□□ -1.02
LINC00563-201ENST00000566370 FAM19A5Q7Z5A7 132 aaPredicted RBP8.65□□□□□ -1.02
LINC00563-201ENST00000566370 HIST1H4AP62805 103 aaKnown RBP8.64□□□□□ -1.03
LINC00563-201ENST00000566370 DNAH3Q8TD57 4116 aa8.64□□□□□ -1.03
LINC00563-201ENST00000566370 C16orf90A8MZG2 172 aa8.63□□□□□ -1.03
LINC00563-201ENST00000566370 B5MCH6 92 aa8.63□□□□□ -1.03
LINC00563-201ENST00000566370 RPL37AP8A6NKH3 93 aa8.63□□□□□ -1.03
LINC00563-201ENST00000566370 SPRR1AP35321 89 aa8.63□□□□□ -1.03
LINC00563-201ENST00000566370 REG3GQ6UW15 175 aa8.63□□□□□ -1.03
LINC00563-201ENST00000566370 A0A1B0GW54 56 aa8.62□□□□□ -1.03
LINC00563-201ENST00000566370 UQCRQO14949 82 aa8.61□□□□□ -1.03
LINC00563-201ENST00000566370 UBE2BP63146 152 aa8.61□□□□□ -1.03
LINC00563-201ENST00000566370 NBDYA0A0U1RRE5 68 aa8.6□□□□□ -1.03
LINC00563-201ENST00000566370 FAM168BA1KXE4 195 aa8.6□□□□□ -1.03
LINC00563-201ENST00000566370 CXCL6P80162 114 aa8.6□□□□□ -1.03
LINC00563-201ENST00000566370 HAMPP81172 84 aa8.6□□□□□ -1.03
LINC00563-201ENST00000566370 LINC00474Q9P2X8 69 aa8.6□□□□□ -1.03
LINC00563-201ENST00000566370 CMYA5Q8N3K9 4069 aa8.6□□□□□ -1.03
LINC00563-201ENST00000566370 Q6ZVQ6 151 aa8.59□□□□□ -1.03
LINC00563-201ENST00000566370 DEFB105AQ8NG35 78 aa8.59□□□□□ -1.03
LINC00563-201ENST00000566370 KRTAP1-5Q9BYS1 174 aa8.59□□□□□ -1.03
LINC00563-201ENST00000566370 KRTAP4-16G5E9R7 235 aaPredicted RBP8.58□□□□□ -1.04
LINC00563-201ENST00000566370 CCDC179H3BU77 68 aa8.58□□□□□ -1.04
LINC00563-201ENST00000566370 FUSP35637 526 aaKnown RBP eCLIP8.58□□□□□ -1.04
LINC00563-201ENST00000566370 C3orf22Q8N5N4 141 aa8.58□□□□□ -1.04
LINC00563-201ENST00000566370 NBEAL1Q6ZS30 2694 aa8.57□□□□□ -1.04
LINC00563-201ENST00000566370 F8WEM9 126 aa8.57□□□□□ -1.04
LINC00563-201ENST00000566370 COX7CP15954 63 aa8.57□□□□□ -1.04
LINC00563-201ENST00000566370 A0A096LNI7 61 aa8.56□□□□□ -1.04
LINC00563-201ENST00000566370 IGKV2-24A0A0C4DH68 120 aa8.56□□□□□ -1.04
LINC00563-201ENST00000566370 BCE1O60756 84 aa8.56□□□□□ -1.04
LINC00563-201ENST00000566370 LINC01547P58512 204 aaPredicted RBP8.56□□□□□ -1.04
LINC00563-201ENST00000566370 C9orf153Q5TBE3 101 aa8.56□□□□□ -1.04
LINC00563-201ENST00000566370 MGAM2Q2M2H8 2515 aa8.56□□□□□ -1.04
LINC00563-201ENST00000566370 IGLV5-48A0A075B6I7 105 aa8.55□□□□□ -1.04
LINC00563-201ENST00000566370 Q8N377 158 aa8.55□□□□□ -1.04
LINC00563-201ENST00000566370 SMIM20Q8N5G0 67 aa8.55□□□□□ -1.04
LINC00563-201ENST00000566370 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.54□□□□□ -1.04
LINC00563-201ENST00000566370 SERP2Q8N6R1 65 aa8.54□□□□□ -1.04
LINC00563-201ENST00000566370 NREPQ16612 68 aa8.54□□□□□ -1.04
LINC00563-201ENST00000566370 Q9BRP9 147 aa8.54□□□□□ -1.04
LINC00563-201ENST00000566370 A0A087WVE0 104 aa8.53□□□□□ -1.04
LINC00563-201ENST00000566370 FAM19A1Q7Z5A9 133 aa8.53□□□□□ -1.04
LINC00563-201ENST00000566370 C9orf163Q8N9P6 203 aa8.53□□□□□ -1.04
LINC00563-201ENST00000566370 KRTAP7-1Q8IUC3 87 aa8.52□□□□□ -1.05
LINC00563-201ENST00000566370 M0R2N4 97 aa8.51□□□□□ -1.05
LINC00563-201ENST00000566370 C1orf137Q5JT78 98 aa8.5□□□□□ -1.05
LINC00563-201ENST00000566370 ANK2Q01484 3957 aa8.5□□□□□ -1.05
LINC00563-201ENST00000566370 LCE2BO14633 110 aa8.49□□□□□ -1.05
LINC00563-201ENST00000566370 HUWE1Q7Z6Z7 4374 aaKnown RBP8.49□□□□□ -1.05
LINC00563-201ENST00000566370 H0Y9J4 135 aa8.48□□□□□ -1.05
LINC00563-201ENST00000566370 A0A1W2PNN7 141 aa8.47□□□□□ -1.05
LINC00563-201ENST00000566370 LRCOL1A6NCL2 159 aa8.47□□□□□ -1.05
LINC00563-201ENST00000566370 CRYGAP11844 174 aa8.47□□□□□ -1.05
LINC00563-201ENST00000566370 DPH3Q96FX2 82 aa8.47□□□□□ -1.05
LINC00563-201ENST00000566370 ST20-AS1Q8NBB2 130 aa8.46□□□□□ -1.05
LINC00563-201ENST00000566370 Q8NBF4 154 aa8.46□□□□□ -1.05
LINC00563-201ENST00000566370 BPY2O14599 106 aa8.46□□□□□ -1.06
LINC00563-201ENST00000566370 UBE2AP49459 152 aa8.46□□□□□ -1.06
LINC00563-201ENST00000566370 TNP2Q05952 138 aa8.46□□□□□ -1.06
LINC00563-201ENST00000566370 HIGD2AQ9BW72 106 aa8.46□□□□□ -1.06
LINC00563-201ENST00000566370 Q6ZRN7 208 aaPredicted RBP8.45□□□□□ -1.06
LINC00563-201ENST00000566370 SS18L2Q9UHA2 77 aa8.45□□□□□ -1.06
LINC00563-201ENST00000566370 STAB2Q8WWQ8 2551 aa8.44□□□□□ -1.06
LINC00563-201ENST00000566370 C3orf84H3BNL1 204 aa8.44□□□□□ -1.06
LINC00563-201ENST00000566370 PRLHP81277 87 aa8.44□□□□□ -1.06
LINC00563-201ENST00000566370 TRAV7A0A075B6U4 112 aa8.43□□□□□ -1.06
LINC00563-201ENST00000566370 ERC2-IT1O76042 136 aa8.43□□□□□ -1.06
LINC00563-201ENST00000566370 PHF5AQ7RTV0 110 aaKnown RBP8.43□□□□□ -1.06
LINC00563-201ENST00000566370 CHTF8P0CG12 524 aa8.42□□□□□ -1.06
LINC00563-201ENST00000566370 SPRR4Q96PI1 79 aa8.42□□□□□ -1.06
LINC00563-201ENST00000566370 SCXQ7RTU7 201 aa8.41□□□□□ -1.06
LINC00563-201ENST00000566370 A0A087WTM6 91 aa8.4□□□□□ -1.06
LINC00563-201ENST00000566370 LINC00476Q8WZB0 136 aa8.4□□□□□ -1.06
LINC00563-201ENST00000566370 IGLV8-61A0A075B6I0 122 aa8.39□□□□□ -1.07
LINC00563-201ENST00000566370 A0A1W2PNM2 257 aa8.39□□□□□ -1.07
LINC00563-201ENST00000566370 EPM2AB3EWF7 344 aa8.39□□□□□ -1.07
LINC00563-201ENST00000566370 SPRR1BP22528 89 aa8.37□□□□□ -1.07
LINC00563-201ENST00000566370 SMIM29Q86T20 159 aa8.37□□□□□ -1.07
LINC00563-201ENST00000566370 TMEM258P61165 79 aa8.37□□□□□ -1.07
LINC00563-201ENST00000566370 C1orf134Q5TEV5 83 aa8.37□□□□□ -1.07
LINC00563-201ENST00000566370 SPACA4Q8TDM5 124 aa8.37□□□□□ -1.07
LINC00563-201ENST00000566370 RTL8CO15255 209 aa8.36□□□□□ -1.07
LINC00563-201ENST00000566370 Q6ZR54 194 aa8.36□□□□□ -1.07
LINC00563-201ENST00000566370 ZNF706Q9Y5V0 76 aaPredicted RBP8.36□□□□□ -1.07
LINC00563-201ENST00000566370 IGKV4-1P06312 121 aa8.35□□□□□ -1.07
LINC00563-201ENST00000566370 IGFL1Q6UW32 110 aa8.34□□□□□ -1.07
LINC00563-201ENST00000566370 DNAH1Q9P2D7 4330 aa8.34□□□□□ -1.07
LINC00563-201ENST00000566370 DNAH9Q9NYC9 4486 aa8.33□□□□□ -1.08
LINC00563-201ENST00000566370 IGLV5-52A0A0A0MRZ9 124 aa8.32□□□□□ -1.08
LINC00563-201ENST00000566370 C20orf197Q8N268 126 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms