RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 BCE1O60756 84 aa7.41□□□□□ -1.22
RNF40-208ENST00000565995 KRTAP13-2Q52LG2 175 aa7.41□□□□□ -1.22
RNF40-208ENST00000565995 LINC00308Q8TCZ7 52 aa7.41□□□□□ -1.22
RNF40-208ENST00000565995 Q6ZVH6 145 aa7.4□□□□□ -1.22
RNF40-208ENST00000565995 CDIP1Q9H305 208 aa7.4□□□□□ -1.22
RNF40-208ENST00000565995 IFITM1P13164 125 aa7.39□□□□□ -1.23
RNF40-208ENST00000565995 HSD52Q0P140 79 aa7.39□□□□□ -1.23
RNF40-208ENST00000565995 FAM229BQ4G0N7 80 aa7.39□□□□□ -1.23
RNF40-208ENST00000565995 PCP4L1A6NKN8 68 aa7.38□□□□□ -1.23
RNF40-208ENST00000565995 DDTP30046 118 aa7.38□□□□□ -1.23
RNF40-208ENST00000565995 SOSTDC1Q6X4U4 206 aa7.38□□□□□ -1.23
RNF40-208ENST00000565995 MRPL55Q7Z7F7 128 aaKnown RBP7.38□□□□□ -1.23
RNF40-208ENST00000565995 KRTAP13-1Q8IUC0 172 aa7.38□□□□□ -1.23
RNF40-208ENST00000565995 MUSTN1Q8IVN3 82 aa7.38□□□□□ -1.23
RNF40-208ENST00000565995 RETNLBQ9BQ08 111 aa7.38□□□□□ -1.23
RNF40-208ENST00000565995 RPL24P83731 157 aaKnown RBP7.37□□□□□ -1.23
RNF40-208ENST00000565995 TAL2Q16559 108 aa7.37□□□□□ -1.23
RNF40-208ENST00000565995 NKAPP1Q8N9T2 125 aa7.37□□□□□ -1.23
RNF40-208ENST00000565995 IGLV7-46A0A075B6I9 117 aa7.36□□□□□ -1.23
RNF40-208ENST00000565995 NCR3O14931 201 aa7.36□□□□□ -1.23
RNF40-208ENST00000565995 LINC00304Q8N9R0 145 aa7.36□□□□□ -1.23
RNF40-208ENST00000565995 TMEM238LA0A1B0GVL6 79 aa7.35□□□□□ -1.23
RNF40-208ENST00000565995 A6NJY4 79 aa7.35□□□□□ -1.23
RNF40-208ENST00000565995 EIF4EBP3O60516 100 aaPredicted RBP7.35□□□□□ -1.23
RNF40-208ENST00000565995 CEND1Q8N111 149 aa7.35□□□□□ -1.23
RNF40-208ENST00000565995 ANAPC11Q9NYG5 84 aa7.35□□□□□ -1.23
RNF40-208ENST00000565995 A4D1N5 150 aa7.34□□□□□ -1.23
RNF40-208ENST00000565995 M0R143 59 aa7.34□□□□□ -1.23
RNF40-208ENST00000565995 LINC00167Q96N53 147 aa7.34□□□□□ -1.23
RNF40-208ENST00000565995 LOC107984156A0A0G2JMH3 177 aa7.33□□□□□ -1.24
RNF40-208ENST00000565995 NDUFC2O95298 119 aa7.33□□□□□ -1.24
RNF40-208ENST00000565995 VPREB1P12018 145 aa7.33□□□□□ -1.24
RNF40-208ENST00000565995 HINT1P49773 126 aaPredicted RBP7.33□□□□□ -1.24
RNF40-208ENST00000565995 ARL17AQ8IVW1 177 aa7.33□□□□□ -1.24
RNF40-208ENST00000565995 CRCT1Q9UGL9 99 aa7.33□□□□□ -1.24
RNF40-208ENST00000565995 IGLV5-37A0A075B6J1 123 aa7.32□□□□□ -1.24
RNF40-208ENST00000565995 GAGE10A6NGK3 116 aa7.32□□□□□ -1.24
RNF40-208ENST00000565995 FXYD2P54710 66 aa7.32□□□□□ -1.24
RNF40-208ENST00000565995 BATFQ16520 125 aa7.32□□□□□ -1.24
RNF40-208ENST00000565995 Q8NDZ9 215 aa7.32□□□□□ -1.24
RNF40-208ENST00000565995 PPDPFQ9H3Y8 114 aa7.32□□□□□ -1.24
RNF40-208ENST00000565995 RPL37AP8A6NKH3 93 aa7.31□□□□□ -1.24
RNF40-208ENST00000565995 S100A7L2Q5SY68 101 aa7.31□□□□□ -1.24
RNF40-208ENST00000565995 OR13C6PQ8NH95 151 aa7.31□□□□□ -1.24
RNF40-208ENST00000565995 RAB37Q96AX2 223 aa7.31□□□□□ -1.24
RNF40-208ENST00000565995 NHP2Q9NX24 153 aaKnown RBP7.31□□□□□ -1.24
RNF40-208ENST00000565995 A6NDN8 102 aa7.3□□□□□ -1.24
RNF40-208ENST00000565995 M0R378 163 aa7.3□□□□□ -1.24
RNF40-208ENST00000565995 BVES-AS1Q5T3Y7 98 aa7.3□□□□□ -1.24
RNF40-208ENST00000565995 TRBV10-2A0A0K0K1G8 114 aa7.29□□□□□ -1.24
RNF40-208ENST00000565995 ASB16-AS1Q495Z4 193 aa7.29□□□□□ -1.24
RNF40-208ENST00000565995 IGKV2-28A0A075B6P5 120 aa7.28□□□□□ -1.24
RNF40-208ENST00000565995 TRAV13-2A0A0B4J235 113 aa7.28□□□□□ -1.24
RNF40-208ENST00000565995 IGKV2D-28P01615 120 aa7.28□□□□□ -1.24
RNF40-208ENST00000565995 LINC01547P58512 204 aaPredicted RBP7.28□□□□□ -1.24
RNF40-208ENST00000565995 LINC00337Q8N6G1 96 aa7.28□□□□□ -1.24
RNF40-208ENST00000565995 A0A0B4J2C4 111 aa7.27□□□□□ -1.25
RNF40-208ENST00000565995 TRBV10-3A0A0K0K1G6 114 aa7.27□□□□□ -1.25
RNF40-208ENST00000565995 H7C2G1 150 aa7.27□□□□□ -1.25
RNF40-208ENST00000565995 K7ERJ3 54 aa7.27□□□□□ -1.25
RNF40-208ENST00000565995 UBE2AP49459 152 aa7.27□□□□□ -1.25
RNF40-208ENST00000565995 Q1RN00 199 aa7.27□□□□□ -1.25
RNF40-208ENST00000565995 FP248Q71RG6 208 aaPredicted RBP7.27□□□□□ -1.25
RNF40-208ENST00000565995 CFC1BP0CG36 223 aa7.26□□□□□ -1.25
RNF40-208ENST00000565995 CFC1P0CG37 223 aa7.26□□□□□ -1.25
RNF40-208ENST00000565995 SPAG11AQ6PDA7 123 aa7.26□□□□□ -1.25
RNF40-208ENST00000565995 KRTAP13-3Q3SY46 172 aa7.25□□□□□ -1.25
RNF40-208ENST00000565995 KRTAP4-1Q9BYQ7 146 aa7.25□□□□□ -1.25
RNF40-208ENST00000565995 TMEM126AQ9H061 195 aa7.25□□□□□ -1.25
RNF40-208ENST00000565995 TRAV23DV6A0A075B6W5 121 aa7.24□□□□□ -1.25
RNF40-208ENST00000565995 PRO1854Q9UHT4 67 aa7.24□□□□□ -1.25
RNF40-208ENST00000565995 CBY1Q9Y3M2 126 aa7.24□□□□□ -1.25
RNF40-208ENST00000565995 FSIP2Q5CZC0 6907 aa7.23□□□□□ -1.25
RNF40-208ENST00000565995 IGLV6-57P01721 117 aa7.23□□□□□ -1.25
RNF40-208ENST00000565995 PRYO14603 147 aa7.22□□□□□ -1.25
RNF40-208ENST00000565995 C3orf22Q8N5N4 141 aa7.22□□□□□ -1.25
RNF40-208ENST00000565995 A0A1B0GWB2 263 aa7.21□□□□□ -1.26
RNF40-208ENST00000565995 SNHG12Q9BXW3 62 aa7.21□□□□□ -1.26
RNF40-208ENST00000565995 ZNF73O43830 326 aaPredicted RBP7.2□□□□□ -1.26
RNF40-208ENST00000565995 PSMB2P49721 201 aa7.2□□□□□ -1.26
RNF40-208ENST00000565995 PRLHP81277 87 aa7.2□□□□□ -1.26
RNF40-208ENST00000565995 ETDCA0A1B0GVM5 59 aa7.19□□□□□ -1.26
RNF40-208ENST00000565995 SEC61BP60468 96 aaKnown RBP7.19□□□□□ -1.26
RNF40-208ENST00000565995 C6orf99Q4VX62 202 aa7.19□□□□□ -1.26
RNF40-208ENST00000565995 SMIM11BQ8TCY0 68 aa7.19□□□□□ -1.26
RNF40-208ENST00000565995 KCNQ1DNQ9H478 68 aa7.19□□□□□ -1.26
RNF40-208ENST00000565995 FAM19A1Q7Z5A9 133 aa7.18□□□□□ -1.26
RNF40-208ENST00000565995 COL5A1-AS1Q5SY13 56 aa7.17□□□□□ -1.26
RNF40-208ENST00000565995 LCE2CQ5TA81 110 aa7.17□□□□□ -1.26
RNF40-208ENST00000565995 VAMP3Q15836 100 aa7.16□□□□□ -1.26
RNF40-208ENST00000565995 NAA38Q9BRA0 125 aaKnown RBP7.16□□□□□ -1.26
RNF40-208ENST00000565995 COX7BP24311 80 aa7.15□□□□□ -1.26
RNF40-208ENST00000565995 SPRR4Q96PI1 79 aa7.15□□□□□ -1.26
RNF40-208ENST00000565995 TRIAP1O43715 76 aa7.14□□□□□ -1.27
RNF40-208ENST00000565995 SPINK1P00995 79 aa7.14□□□□□ -1.27
RNF40-208ENST00000565995 COX6CP09669 75 aa7.14□□□□□ -1.27
RNF40-208ENST00000565995 C4orf48Q5BLP8 95 aa7.14□□□□□ -1.27
RNF40-208ENST00000565995 H3BUT2 72 aa7.13□□□□□ -1.27
RNF40-208ENST00000565995 SCGB1C2P0DMR2 95 aa7.13□□□□□ -1.27
RNF40-208ENST00000565995 SPRR1AP35321 89 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms