RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 LINC00528Q8N1L1 170 aa4.27□□□□□ -1.73
LINC01043-201ENST00000565936 HECTD1Q9ULT8 2610 aa4.27□□□□□ -1.73
LINC01043-201ENST00000565936 COX6B2Q6YFQ2 88 aa4.27□□□□□ -1.73
LINC01043-201ENST00000565936 A8MWP4 228 aa4.27□□□□□ -1.73
LINC01043-201ENST00000565936 FAM218AQ96MZ4 157 aa4.27□□□□□ -1.73
LINC01043-201ENST00000565936 SMR3BP02814 79 aaPredicted RBP4.26□□□□□ -1.73
LINC01043-201ENST00000565936 LITAFQ99732 161 aa4.26□□□□□ -1.73
LINC01043-201ENST00000565936 C9orf129Q5T035 196 aaKnown RBP4.26□□□□□ -1.73
LINC01043-201ENST00000565936 TRAV22A0A0B4J277 110 aa4.25□□□□□ -1.73
LINC01043-201ENST00000565936 LOC101927531A0A1B0GV80 90 aa4.25□□□□□ -1.73
LINC01043-201ENST00000565936 MRPL34Q9BQ48 92 aaKnown RBP4.24□□□□□ -1.73
LINC01043-201ENST00000565936 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
LINC01043-201ENST00000565936 PSORS1C2Q9UIG4 136 aa4.24□□□□□ -1.73
LINC01043-201ENST00000565936 HELZ2Q9BYK8 2649 aaKnown RBP4.24□□□□□ -1.73
LINC01043-201ENST00000565936 CR1P17927 2039 aa4.24□□□□□ -1.73
LINC01043-201ENST00000565936 IGLV5-37A0A075B6J1 123 aa4.23□□□□□ -1.73
LINC01043-201ENST00000565936 SPINT4Q6UDR6 99 aa4.23□□□□□ -1.73
LINC01043-201ENST00000565936 TNP2Q05952 138 aa4.22□□□□□ -1.73
LINC01043-201ENST00000565936 IGFL1Q6UW32 110 aa4.22□□□□□ -1.73
LINC01043-201ENST00000565936 SPRR4Q96PI1 79 aa4.22□□□□□ -1.73
LINC01043-201ENST00000565936 A0A1W2PNN7 141 aa4.22□□□□□ -1.73
LINC01043-201ENST00000565936 C4orf26Q17RF5 130 aa4.21□□□□□ -1.74
LINC01043-201ENST00000565936 RBM12B-AS1Q9P1G2 102 aa4.21□□□□□ -1.74
LINC01043-201ENST00000565936 UTRNP46939 3433 aa4.21□□□□□ -1.74
LINC01043-201ENST00000565936 IGLV8-61A0A075B6I0 122 aa4.2□□□□□ -1.74
LINC01043-201ENST00000565936 A0A1B0GVX0 72 aa4.2□□□□□ -1.74
LINC01043-201ENST00000565936 CD164Q04900 197 aa4.19□□□□□ -1.74
LINC01043-201ENST00000565936 Q8N377 158 aa4.19□□□□□ -1.74
LINC01043-201ENST00000565936 C8orf17Q9NRJ1 99 aa4.19□□□□□ -1.74
LINC01043-201ENST00000565936 PRR15Q8IV56 129 aa4.18□□□□□ -1.74
LINC01043-201ENST00000565936 OBSCN-AS1Q96MR7 158 aa4.18□□□□□ -1.74
LINC01043-201ENST00000565936 FAM229BQ4G0N7 80 aa4.18□□□□□ -1.74
LINC01043-201ENST00000565936 FLNAP21333 2647 aaKnown RBP4.18□□□□□ -1.74
LINC01043-201ENST00000565936 SMCPP49901 116 aaPredicted RBP4.17□□□□□ -1.74
LINC01043-201ENST00000565936 DSCR10P59022 87 aa4.17□□□□□ -1.74
LINC01043-201ENST00000565936 LCE6AA0A183 80 aa4.17□□□□□ -1.74
LINC01043-201ENST00000565936 PRO0461Q9UI25 63 aa4.17□□□□□ -1.74
LINC01043-201ENST00000565936 ITPR3Q14573 2671 aa4.17□□□□□ -1.74
LINC01043-201ENST00000565936 C9orf92A6NGG3 77 aa4.17□□□□□ -1.74
LINC01043-201ENST00000565936 ERC2-IT1O76042 136 aa4.16□□□□□ -1.74
LINC01043-201ENST00000565936 CEP350Q5VT06 3117 aa4.16□□□□□ -1.74
LINC01043-201ENST00000565936 K7EQZ3 153 aa4.16□□□□□ -1.74
LINC01043-201ENST00000565936 PLAC8Q9NZF1 115 aa4.15□□□□□ -1.74
LINC01043-201ENST00000565936 DNAH12Q6ZR08 3092 aa4.15□□□□□ -1.75
LINC01043-201ENST00000565936 KRTAP21-3Q3LHN1 58 aa4.15□□□□□ -1.75
LINC01043-201ENST00000565936 RPS28P62857 69 aaKnown RBP4.14□□□□□ -1.75
LINC01043-201ENST00000565936 MGAM2Q2M2H8 2515 aa4.14□□□□□ -1.75
LINC01043-201ENST00000565936 ANAPC11Q9NYG5 84 aa4.13□□□□□ -1.75
LINC01043-201ENST00000565936 IGLV7-46A0A075B6I9 117 aa4.13□□□□□ -1.75
LINC01043-201ENST00000565936 HTTP42858 3142 aa4.13□□□□□ -1.75
LINC01043-201ENST00000565936 CFAP46Q8IYW2 2715 aa4.13□□□□□ -1.75
LINC01043-201ENST00000565936 Q6ZSA8 131 aa4.12□□□□□ -1.75
LINC01043-201ENST00000565936 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.12□□□□□ -1.75
LINC01043-201ENST00000565936 COA5Q86WW8 74 aa4.11□□□□□ -1.75
LINC01043-201ENST00000565936 LINC01600Q96MT4 127 aa4.11□□□□□ -1.75
LINC01043-201ENST00000565936 IGLV5-48A0A075B6I7 105 aa4.1□□□□□ -1.75
LINC01043-201ENST00000565936 EIF4EBP3O60516 100 aaPredicted RBP4.1□□□□□ -1.75
LINC01043-201ENST00000565936 CHD9Q3L8U1 2897 aa4.1□□□□□ -1.75
LINC01043-201ENST00000565936 CRIPTQ9P021 101 aa4.09□□□□□ -1.75
LINC01043-201ENST00000565936 CHD7Q9P2D1 2997 aa4.09□□□□□ -1.75
LINC01043-201ENST00000565936 USP24Q9UPU5 2620 aa4.09□□□□□ -1.75
LINC01043-201ENST00000565936 PRR26Q8N8Z3 221 aa4.09□□□□□ -1.75
LINC01043-201ENST00000565936 A8MUN3 132 aa4.09□□□□□ -1.76
LINC01043-201ENST00000565936 UQCR11O14957 56 aa4.08□□□□□ -1.76
LINC01043-201ENST00000565936 CYP4F30PQ9H0H9 118 aa4.08□□□□□ -1.76
LINC01043-201ENST00000565936 ATRQ13535 2644 aa4.07□□□□□ -1.76
LINC01043-201ENST00000565936 A0A1W2PNM2 257 aa4.07□□□□□ -1.76
LINC01043-201ENST00000565936 MAST4O15021 2626 aa4.07□□□□□ -1.76
LINC01043-201ENST00000565936 MIR22HGQ0VDD5 57 aa4.07□□□□□ -1.76
LINC01043-201ENST00000565936 Q5VSD8 79 aa4.07□□□□□ -1.76
LINC01043-201ENST00000565936 PRRC2CQ9Y520 2896 aaKnown RBP4.06□□□□□ -1.76
LINC01043-201ENST00000565936 ZNF292O60281 2723 aa4.06□□□□□ -1.76
LINC01043-201ENST00000565936 A0A0G2JQZ4 141 aa4.05□□□□□ -1.76
LINC01043-201ENST00000565936 SEC61BP60468 96 aaKnown RBP4.05□□□□□ -1.76
LINC01043-201ENST00000565936 PCNTO95613 3336 aa4.04□□□□□ -1.76
LINC01043-201ENST00000565936 SPRR1AP35321 89 aa4.04□□□□□ -1.76
LINC01043-201ENST00000565936 TRANK1O15050 2925 aa4.03□□□□□ -1.76
LINC01043-201ENST00000565936 OXTP01178 125 aa4.03□□□□□ -1.76
LINC01043-201ENST00000565936 M0R2T5 61 aa4.02□□□□□ -1.77
LINC01043-201ENST00000565936 FAM104AQ969W3 186 aa4.02□□□□□ -1.77
LINC01043-201ENST00000565936 RANBP2P49792 3224 aaKnown RBP4.02□□□□□ -1.77
LINC01043-201ENST00000565936 SPRR1BP22528 89 aa4.02□□□□□ -1.77
LINC01043-201ENST00000565936 BAHCC1Q9P281 2608 aa4.01□□□□□ -1.77
LINC01043-201ENST00000565936 SPANXA2-OT1Q8N9U9 137 aa4.01□□□□□ -1.77
LINC01043-201ENST00000565936 Q6ZR54 194 aa4.01□□□□□ -1.77
LINC01043-201ENST00000565936 BPTFQ12830 3046 aa4.01□□□□□ -1.77
LINC01043-201ENST00000565936 KLKP1Q107X0 134 aa4.01□□□□□ -1.77
LINC01043-201ENST00000565936 KRTAP10-1P60331 282 aa4.01□□□□□ -1.77
LINC01043-201ENST00000565936 KRTAP1-5Q9BYS1 174 aa4.01□□□□□ -1.77
LINC01043-201ENST00000565936 FP248Q71RG6 208 aaPredicted RBP4□□□□□ -1.77
LINC01043-201ENST00000565936 CDC42SE1Q9NRR8 79 aa4□□□□□ -1.77
LINC01043-201ENST00000565936 KTN1-AS1Q86SY8 53 aa3.99□□□□□ -1.77
LINC01043-201ENST00000565936 A0A0D9SG42 100 aa3.99□□□□□ -1.77
LINC01043-201ENST00000565936 LINC01554Q52M75 96 aa3.99□□□□□ -1.77
LINC01043-201ENST00000565936 KRTAP26-1Q6PEX3 210 aa3.99□□□□□ -1.77
LINC01043-201ENST00000565936 LCA10Q71F78 164 aa3.99□□□□□ -1.77
LINC01043-201ENST00000565936 KRTAP10-2P60368 255 aa3.98□□□□□ -1.77
LINC01043-201ENST00000565936 ZCCHC13Q8WW36 166 aaKnown RBP3.98□□□□□ -1.77
LINC01043-201ENST00000565936 C5orf42Q9H799 3197 aa3.98□□□□□ -1.77
LINC01043-201ENST00000565936 Q8N1X5 172 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms