RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 CSNK1G2-AS1Q8NCQ2 148 aa8.99□□□□□ -0.97
CX3CL1-204ENST00000565912 UQCR11O14957 56 aa8.99□□□□□ -0.97
CX3CL1-204ENST00000565912 LINC00528Q8N1L1 170 aa8.99□□□□□ -0.97
CX3CL1-204ENST00000565912 ZNF861PO60384 105 aa8.98□□□□□ -0.97
CX3CL1-204ENST00000565912 ANKRD17O75179 2603 aaKnown RBP8.98□□□□□ -0.97
CX3CL1-204ENST00000565912 FASNP49327 2511 aaKnown RBP8.97□□□□□ -0.97
CX3CL1-204ENST00000565912 A0A0G2JQZ4 141 aa8.96□□□□□ -0.97
CX3CL1-204ENST00000565912 A0A1W2PNN7 141 aa8.96□□□□□ -0.97
CX3CL1-204ENST00000565912 CRIPTQ9P021 101 aa8.96□□□□□ -0.97
CX3CL1-204ENST00000565912 C15orf56Q8N910 161 aa8.96□□□□□ -0.98
CX3CL1-204ENST00000565912 PRR15Q8IV56 129 aa8.96□□□□□ -0.98
CX3CL1-204ENST00000565912 ANAPC11Q9NYG5 84 aa8.95□□□□□ -0.98
CX3CL1-204ENST00000565912 A0A1B0GVX0 72 aa8.95□□□□□ -0.98
CX3CL1-204ENST00000565912 A0A087WTM6 91 aa8.94□□□□□ -0.98
CX3CL1-204ENST00000565912 KLK9Q2XQG4 91 aa8.94□□□□□ -0.98
CX3CL1-204ENST00000565912 C9orf129Q5T035 196 aaKnown RBP8.93□□□□□ -0.98
CX3CL1-204ENST00000565912 ERC2-IT1O76042 136 aa8.93□□□□□ -0.98
CX3CL1-204ENST00000565912 IGLV5-37A0A075B6J1 123 aa8.92□□□□□ -0.98
CX3CL1-204ENST00000565912 C19orf73Q9NVV2 129 aa8.92□□□□□ -0.98
CX3CL1-204ENST00000565912 MIR22HGQ0VDD5 57 aa8.92□□□□□ -0.98
CX3CL1-204ENST00000565912 PRR34Q9NV39 138 aa8.92□□□□□ -0.98
CX3CL1-204ENST00000565912 ACANP16112 2415 aa8.92□□□□□ -0.98
CX3CL1-204ENST00000565912 Q8N377 158 aa8.92□□□□□ -0.98
CX3CL1-204ENST00000565912 EIF4EBP3O60516 100 aaPredicted RBP8.91□□□□□ -0.98
CX3CL1-204ENST00000565912 CYP4F30PQ9H0H9 118 aa8.91□□□□□ -0.98
CX3CL1-204ENST00000565912 A0A096LNT2 108 aa8.89□□□□□ -0.99
CX3CL1-204ENST00000565912 LINC01554Q52M75 96 aa8.89□□□□□ -0.99
CX3CL1-204ENST00000565912 C9orf163Q8N9P6 203 aa8.88□□□□□ -0.99
CX3CL1-204ENST00000565912 EPG5Q9HCE0 2579 aa8.88□□□□□ -0.99
CX3CL1-204ENST00000565912 KRTAP10-3P60369 221 aa8.87□□□□□ -0.99
CX3CL1-204ENST00000565912 RBM12B-AS1Q9P1G2 102 aa8.87□□□□□ -0.99
CX3CL1-204ENST00000565912 IGLV7-43P04211 117 aa8.87□□□□□ -0.99
CX3CL1-204ENST00000565912 C5orf42Q9H799 3197 aa8.86□□□□□ -0.99
CX3CL1-204ENST00000565912 CHD7Q9P2D1 2997 aa8.85□□□□□ -0.99
CX3CL1-204ENST00000565912 GIG44P09565 113 aaPredicted RBP8.85□□□□□ -0.99
CX3CL1-204ENST00000565912 PSORS1C2Q9UIG4 136 aa8.84□□□□□ -0.99
CX3CL1-204ENST00000565912 PCNTO95613 3336 aa8.83□□□□□ -1
CX3CL1-204ENST00000565912 A0A0D9SG42 100 aa8.83□□□□□ -1
CX3CL1-204ENST00000565912 TLX1NBP0CAT3 122 aa8.83□□□□□ -1
CX3CL1-204ENST00000565912 CASC10Q5T4H9 136 aa8.82□□□□□ -1
CX3CL1-204ENST00000565912 PLA2G2DQ9UNK4 145 aa8.82□□□□□ -1
CX3CL1-204ENST00000565912 Q8N1X5 172 aa8.8□□□□□ -1
CX3CL1-204ENST00000565912 SPRR4Q96PI1 79 aa8.8□□□□□ -1
CX3CL1-204ENST00000565912 LINC00336Q6ZUF6 198 aa8.79□□□□□ -1
CX3CL1-204ENST00000565912 IGLV5-48A0A075B6I7 105 aa8.79□□□□□ -1
CX3CL1-204ENST00000565912 LINC00612Q8N6U2 182 aa8.79□□□□□ -1
CX3CL1-204ENST00000565912 KLKP1Q107X0 134 aa8.78□□□□□ -1
CX3CL1-204ENST00000565912 PRRC2CQ9Y520 2896 aaKnown RBP8.78□□□□□ -1
CX3CL1-204ENST00000565912 FAM104AQ969W3 186 aa8.76□□□□□ -1.01
CX3CL1-204ENST00000565912 HTTP42858 3142 aa8.76□□□□□ -1.01
CX3CL1-204ENST00000565912 ZNF575Q86XF7 245 aa8.76□□□□□ -1.01
CX3CL1-204ENST00000565912 KRTAP1-3Q8IUG1 177 aa8.76□□□□□ -1.01
CX3CL1-204ENST00000565912 A0A1W2PNM2 257 aa8.74□□□□□ -1.01
CX3CL1-204ENST00000565912 CDC42SE1Q9NRR8 79 aa8.74□□□□□ -1.01
CX3CL1-204ENST00000565912 CNBPP62633 177 aaKnown RBP8.73□□□□□ -1.01
CX3CL1-204ENST00000565912 H7BZZ5 65 aa8.71□□□□□ -1.01
CX3CL1-204ENST00000565912 CHD9Q3L8U1 2897 aa8.71□□□□□ -1.02
CX3CL1-204ENST00000565912 HECTD1Q9ULT8 2610 aa8.68□□□□□ -1.02
CX3CL1-204ENST00000565912 KRTAP1-1Q07627 177 aa8.68□□□□□ -1.02
CX3CL1-204ENST00000565912 Q6ZSA8 131 aa8.68□□□□□ -1.02
CX3CL1-204ENST00000565912 RANBP2P49792 3224 aaKnown RBP8.66□□□□□ -1.02
CX3CL1-204ENST00000565912 USP24Q9UPU5 2620 aa8.66□□□□□ -1.02
CX3CL1-204ENST00000565912 MGAM2Q2M2H8 2515 aa8.65□□□□□ -1.03
CX3CL1-204ENST00000565912 TNP2Q05952 138 aa8.65□□□□□ -1.03
CX3CL1-204ENST00000565912 SPANXA2-OT1Q8N9U9 137 aa8.63□□□□□ -1.03
CX3CL1-204ENST00000565912 FLNBO75369 2602 aaKnown RBP8.63□□□□□ -1.03
CX3CL1-204ENST00000565912 KTN1-AS1Q86SY8 53 aa8.62□□□□□ -1.03
CX3CL1-204ENST00000565912 MKI67P46013 3256 aaKnown RBP8.61□□□□□ -1.03
CX3CL1-204ENST00000565912 IGLV7-46A0A075B6I9 117 aa8.61□□□□□ -1.03
CX3CL1-204ENST00000565912 M0R2T5 61 aa8.61□□□□□ -1.03
CX3CL1-204ENST00000565912 LCA10Q71F78 164 aa8.61□□□□□ -1.03
CX3CL1-204ENST00000565912 PRR26Q8N8Z3 221 aa8.6□□□□□ -1.03
CX3CL1-204ENST00000565912 CAMK2N1Q7Z7J9 78 aa8.6□□□□□ -1.03
CX3CL1-204ENST00000565912 CD164Q04900 197 aa8.59□□□□□ -1.03
CX3CL1-204ENST00000565912 LAMA3Q16787 3333 aa8.58□□□□□ -1.04
CX3CL1-204ENST00000565912 LUZP6Q538Z0 58 aa8.58□□□□□ -1.04
CX3CL1-204ENST00000565912 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.56□□□□□ -1.04
CX3CL1-204ENST00000565912 BRCA2P51587 3418 aa8.52□□□□□ -1.05
CX3CL1-204ENST00000565912 Q1T7F1 81 aa8.52□□□□□ -1.05
CX3CL1-204ENST00000565912 A0A1B0GU33 70 aa8.51□□□□□ -1.05
CX3CL1-204ENST00000565912 BPTFQ12830 3046 aa8.51□□□□□ -1.05
CX3CL1-204ENST00000565912 TRANK1O15050 2925 aa8.5□□□□□ -1.05
CX3CL1-204ENST00000565912 HRES1P13985 223 aa8.5□□□□□ -1.05
CX3CL1-204ENST00000565912 OCR1Q9BZK8 76 aa8.49□□□□□ -1.05
CX3CL1-204ENST00000565912 LINC00483Q53H64 154 aa8.47□□□□□ -1.05
CX3CL1-204ENST00000565912 FLNAP21333 2647 aaKnown RBP8.46□□□□□ -1.05
CX3CL1-204ENST00000565912 CR1P17927 2039 aa8.45□□□□□ -1.06
CX3CL1-204ENST00000565912 ITPR3Q14573 2671 aa8.43□□□□□ -1.06
CX3CL1-204ENST00000565912 ATRQ13535 2644 aa8.43□□□□□ -1.06
CX3CL1-204ENST00000565912 FAM229BQ4G0N7 80 aa8.43□□□□□ -1.06
CX3CL1-204ENST00000565912 CSAG1Q6PB30 78 aa8.42□□□□□ -1.06
CX3CL1-204ENST00000565912 ZCCHC13Q8WW36 166 aaKnown RBP8.42□□□□□ -1.06
CX3CL1-204ENST00000565912 HELZ2Q9BYK8 2649 aaKnown RBP8.42□□□□□ -1.06
CX3CL1-204ENST00000565912 S4R3F8 94 aa8.4□□□□□ -1.06
CX3CL1-204ENST00000565912 Q8N9P0 234 aaPredicted RBP8.4□□□□□ -1.06
CX3CL1-204ENST00000565912 PLAC8Q9NZF1 115 aa8.39□□□□□ -1.07
CX3CL1-204ENST00000565912 PRUNE2Q8WUY3 3088 aa8.38□□□□□ -1.07
CX3CL1-204ENST00000565912 MMP24-AS1A0A0U1RRL7 71 aa8.37□□□□□ -1.07
CX3CL1-204ENST00000565912 MAST4O15021 2626 aa8.37□□□□□ -1.07
CX3CL1-204ENST00000565912 CFAP46Q8IYW2 2715 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms