RNA–Protein interactions for RNA: ENST00000565113.5

DNAAF4-CCPG1-201, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene DNAAF4-CCPG1, Length 4,589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-201ENST00000565113 MRPL55Q7Z7F7 128 aaKnown RBP3.31□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 LORP23490 312 aaPredicted RBP3.31□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 CASC10Q5T4H9 136 aa3.31□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 FLNBO75369 2602 aaKnown RBP3.31□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 RPL37AP8A6NKH3 93 aa3.31□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 DEFB105AQ8NG35 78 aa3.31□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 APLNQ9ULZ1 77 aa3.31□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 IGLV1-50A0A075B6I6 118 aa3.31□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 DNAH3Q8TD57 4116 aa3.3□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 CCDC179H3BU77 68 aa3.3□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 B5MCH6 92 aa3.3□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 HAMPP81172 84 aa3.3□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 Q6ZRX8 168 aa3.3□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 UBE2BP63146 152 aa3.3□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 MDFIQ99750 246 aa3.3□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 KRTAP17-1Q9BYP8 105 aa3.3□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 FAM168BA1KXE4 195 aa3.29□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 UQCRQO14949 82 aa3.29□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 REG3GQ6UW15 175 aa3.29□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 C3orf22Q8N5N4 141 aa3.29□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 CNBPP62633 177 aaKnown RBP3.29□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 C9orf153Q5TBE3 101 aa3.29□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 FBN1P35555 2871 aaKnown RBP3.29□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 TRBV7-4A0A0J9YYF1 115 aa3.29□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 C16orf90A8MZG2 172 aa3.29□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 MAST4O15021 2626 aa3.29□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 STAB1Q9NY15 2570 aa3.28□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 IGKV2-24A0A0C4DH68 120 aa3.28□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 F8WEM9 126 aa3.28□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 FUSP35637 526 aaKnown RBP eCLIP3.28□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 Q6ZVQ6 151 aa3.28□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 CXCL6P80162 114 aa3.28□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 COX7CP15954 63 aa3.28□□□□□ -1.88
DNAAF4-CCPG1-201ENST00000565113 LINC01547P58512 204 aaPredicted RBP3.27□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 LINC00474Q9P2X8 69 aa3.27□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 BAHCC1Q9P281 2608 aa3.27□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.27□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 A0A087WVE0 104 aa3.27□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 NBDYA0A0U1RRE5 68 aa3.27□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 SPRR1AP35321 89 aa3.27□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 NREPQ16612 68 aa3.27□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 SERP2Q8N6R1 65 aa3.27□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 A0A1B0GW54 56 aa3.27□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 SMIM20Q8N5G0 67 aa3.27□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 DPH3Q96FX2 82 aa3.27□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 A0A096LNI7 61 aa3.26□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 FAM19A1Q7Z5A9 133 aa3.26□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 Q8N377 158 aa3.26□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 KRTAP1-5Q9BYS1 174 aa3.26□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 SS18L2Q9UHA2 77 aa3.26□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 KRTAP4-16G5E9R7 235 aaPredicted RBP3.26□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 Q9BRP9 147 aa3.26□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 BCE1O60756 84 aa3.25□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 HUWE1Q7Z6Z7 4374 aaKnown RBP3.25□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 IGLV5-48A0A075B6I7 105 aa3.25□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 M0R2N4 97 aa3.25□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 ANK2Q01484 3957 aa3.25□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 C1orf137Q5JT78 98 aa3.25□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 COL6A5A8TX70 2615 aa3.24□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 BPY2O14599 106 aa3.24□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 KRTAP7-1Q8IUC3 87 aa3.24□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 ST20-AS1Q8NBB2 130 aa3.24□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 TENM3Q9P273 2699 aa3.24□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 C3orf84H3BNL1 204 aa3.24□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 UBE2AP49459 152 aa3.24□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 A0A1W2PNN7 141 aa3.24□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 CRYGAP11844 174 aa3.24□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 SCXQ7RTU7 201 aa3.24□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 C9orf163Q8N9P6 203 aa3.24□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 HIGD2AQ9BW72 106 aa3.24□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 PKD1L1Q8TDX9 2849 aa3.23□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 NOTCH1P46531 2555 aa3.23□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 TRAV7A0A075B6U4 112 aa3.22□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 PRLHP81277 87 aa3.22□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 Q8NBF4 154 aa3.22□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 LRCOL1A6NCL2 159 aa3.22□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 ERC2-IT1O76042 136 aa3.22□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 PHF5AQ7RTV0 110 aaKnown RBP3.22□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 CHTF8P0CG12 524 aa3.22□□□□□ -1.89
DNAAF4-CCPG1-201ENST00000565113 H0Y9J4 135 aa3.21□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 TNP2Q05952 138 aa3.21□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 LINC00476Q8WZB0 136 aa3.21□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 DNAH1Q9P2D7 4330 aa3.21□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 EPM2AB3EWF7 344 aa3.2□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 TMEM258P61165 79 aa3.2□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 A0A1W2PNM2 257 aa3.2□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 A0A087WTM6 91 aa3.2□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 Q6ZRN7 208 aaPredicted RBP3.2□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 SPRR4Q96PI1 79 aa3.2□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.19□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 MGAM2Q2M2H8 2515 aa3.19□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 IGKV4-1P06312 121 aa3.19□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 C1orf134Q5TEV5 83 aa3.19□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 SMIM29Q86T20 159 aa3.19□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 C20orf197Q8N268 126 aa3.19□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 KRTAP4-8Q9BYQ9 185 aa3.19□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 RTL8CO15255 209 aa3.19□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 ZNF706Q9Y5V0 76 aaPredicted RBP3.19□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 IGLV8-61A0A075B6I0 122 aa3.18□□□□□ -1.9
DNAAF4-CCPG1-201ENST00000565113 IGFL1Q6UW32 110 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms