RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 H3BNG1 76 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 K7ERJ3 54 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 MPC2O95563 127 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 CFDP00746 253 aaPredicted RBP0.8□□□□□ -2.28
PALB2-203ENST00000565038 CXCL1P09341 107 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 ARMS2P0C7Q2 107 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 S100A11P31949 105 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 S100A5P33763 92 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 ASIPP42127 132 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 TMEM78Q5T7P6 136 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 TRIQKQ629K1 86 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 RPL7L1Q6DKI1 246 aaKnown RBP0.8□□□□□ -2.28
PALB2-203ENST00000565038 Q8N814 137 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 ATP6V0E2Q8NHE4 81 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 TMEM263Q8WUH6 116 aaKnown RBP0.8□□□□□ -2.28
PALB2-203ENST00000565038 PPP1R1CQ8WVI7 109 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 LINC00526Q96FQ7 95 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 LINC00467Q9BRT7 94 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 GGACTQ9BVM4 153 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 NMES1Q9C002 83 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 ZFP30Q9Y2G7 519 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 C22orf24Q9Y442 160 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 HSPB11Q9Y547 144 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 LY96Q9Y6Y9 160 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 TRAV21A0A0B4J279 112 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 TMEM238C9JI98 176 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 M0R2P5 195 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 M0R378 163 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 TCRAP04437 139 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 FABP1P07148 127 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 ZNF25P17030 456 aaPredicted RBP0.79□□□□□ -2.28
PALB2-203ENST00000565038 EVI2AP22794 236 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 GCHFRP30047 84 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 FAUP35544 74 aaKnown RBP0.79□□□□□ -2.28
PALB2-203ENST00000565038 LELP1Q5T871 98 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 Q6AWC8 147 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 CLPSL2Q6UWE3 100 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 C2orf82Q6UX34 121 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 DPH3Q96FX2 82 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 ZC2HC1AQ96GY0 325 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 TMEM70Q9BUB7 260 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 OTORQ9NRC9 128 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 MUC12Q9UKN1 5478 aa0.79□□□□□ -2.28
PALB2-203ENST00000565038 FLGP20930 4061 aaPredicted RBP0.78□□□□□ -2.28
PALB2-203ENST00000565038 TRBV6-4A0A1B0GX49 114 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 RBAKDNA6NC62 111 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 H3BVH4 76 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 TRGC2P03986 189 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 NMBP08949 121 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 LINC00694P0DN24 101 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 UBE2D3P61077 147 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 CNBPP62633 177 aaKnown RBP0.78□□□□□ -2.28
PALB2-203ENST00000565038 UBE2D2P62837 147 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 UBE2L3P68036 154 aaKnown RBP0.78□□□□□ -2.28
PALB2-203ENST00000565038 TDRG1Q3Y452 100 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 LINC01556Q5JQF7 62 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 FAM74A4Q5TZK3 123 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 BAGE2Q86Y30 109 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 LINC00269Q8N2A0 174 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 FAM19A2Q8N3H0 131 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 OR10AG1Q8NH19 301 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 RAB37Q96AX2 223 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 CHCHD1Q96BP2 118 aaKnown RBP0.78□□□□□ -2.28
PALB2-203ENST00000565038 PFDN5Q99471 154 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 MAP1LC3BQ9GZQ8 125 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 CACFD1Q9UGQ2 172 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 ARL2-SNX15V9GYD0 113 aa0.78□□□□□ -2.28
PALB2-203ENST00000565038 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.77□□□□□ -2.29
PALB2-203ENST00000565038 FXYD6-FXYD2A0A087WZ82 144 aa0.77□□□□□ -2.29
PALB2-203ENST00000565038 C17orf112F2Z3M2 114 aa0.77□□□□□ -2.29
PALB2-203ENST00000565038 M0QY20 66 aa0.77□□□□□ -2.29
PALB2-203ENST00000565038 RPL37AP61513 92 aaKnown RBP0.77□□□□□ -2.29
PALB2-203ENST00000565038 COX6A2Q02221 97 aa0.77□□□□□ -2.29
PALB2-203ENST00000565038 RHOHQ15669 191 aa0.77□□□□□ -2.29
PALB2-203ENST00000565038 SAMD13Q5VXD3 122 aa0.77□□□□□ -2.29
PALB2-203ENST00000565038 PHF5AQ7RTV0 110 aaKnown RBP0.77□□□□□ -2.29
PALB2-203ENST00000565038 STX12Q86Y82 276 aa0.77□□□□□ -2.29
PALB2-203ENST00000565038 RPL39LQ96EH5 51 aaKnown RBP0.77□□□□□ -2.29
PALB2-203ENST00000565038 AQP10Q96PS8 301 aa0.77□□□□□ -2.29
PALB2-203ENST00000565038 CCDC32Q9BV29 185 aa0.77□□□□□ -2.29
PALB2-203ENST00000565038 BIN3Q9NQY0 253 aa0.77□□□□□ -2.29
PALB2-203ENST00000565038 TNFSF18Q9UNG2 199 aa0.77□□□□□ -2.29
PALB2-203ENST00000565038 LENEPQ9Y5L5 61 aa0.77□□□□□ -2.29
PALB2-203ENST00000565038 SYNE2Q8WXH0 6885 aaKnown RBP0.77□□□□□ -2.29
PALB2-203ENST00000565038 MDN1Q9NU22 5596 aa0.77□□□□□ -2.29
PALB2-203ENST00000565038 TRBV7-3A0A075B6L6 115 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 A0A096LNI7 61 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 TRBV10-1A0A0K0K1A3 114 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 TRBV6-1A0A0K0K1D8 114 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 CTXND1A0A1B0GTU2 59 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 A0A1W2PRE2 83 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 MAP1LC3B2A6NCE7 125 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 F8W1H4 67 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 ARPC5O15511 151 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 ERC2-IT1O76042 136 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 MT-ND6P03923 174 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 MGPP08493 103 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 IGLC6P0CF74 106 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 TPT1P13693 172 aaKnown RBP0.76□□□□□ -2.29
PALB2-203ENST00000565038 RPL35P42766 123 aaKnown RBP0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms