RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	C22orf24	Q9Y442	160 aa		2.89	□□□□□ -1.95
MACF1-231	ENST00000564288	TLX1NB	P0CAT3	122 aa		2.89	□□□□□ -1.95
MACF1-231	ENST00000564288	REG3G	Q6UW15	175 aa		2.89	□□□□□ -1.95
MACF1-231	ENST00000564288	COA5	Q86WW8	74 aa		2.89	□□□□□ -1.95
MACF1-231	ENST00000564288	KALRN	O60229	2985 aa		2.89	□□□□□ -1.95
MACF1-231	ENST00000564288		A0A096LPF7	62 aa		2.89	□□□□□ -1.95
MACF1-231	ENST00000564288	OXT	P01178	125 aa		2.89	□□□□□ -1.95
MACF1-231	ENST00000564288	DEFB131B	A0A096LNP1	70 aa		2.89	□□□□□ -1.95
MACF1-231	ENST00000564288	SMIM29	Q86T20	159 aa		2.89	□□□□□ -1.95
MACF1-231	ENST00000564288	TENM3	Q9P273	2699 aa		2.88	□□□□□ -1.95
MACF1-231	ENST00000564288		A8MWP4	228 aa		2.88	□□□□□ -1.95
MACF1-231	ENST00000564288	GRN	P28799	593 aa	Known RBP	2.88	□□□□□ -1.95
MACF1-231	ENST00000564288		A0A1W2PNU3	283 aa	Predicted RBP	2.88	□□□□□ -1.95
MACF1-231	ENST00000564288	LINC00612	Q8N6U2	182 aa		2.88	□□□□□ -1.95
MACF1-231	ENST00000564288	MIR22HG	Q0VDD5	57 aa		2.88	□□□□□ -1.95
MACF1-231	ENST00000564288	DEFB116	Q30KQ4	102 aa		2.87	□□□□□ -1.95
MACF1-231	ENST00000564288		Q8N377	158 aa		2.87	□□□□□ -1.95
MACF1-231	ENST00000564288	PRR34	Q9NV39	138 aa		2.87	□□□□□ -1.95
MACF1-231	ENST00000564288	LINC00528	Q8N1L1	170 aa		2.87	□□□□□ -1.95
MACF1-231	ENST00000564288	ZNF702P	Q9H963	129 aa		2.87	□□□□□ -1.95
MACF1-231	ENST00000564288	TNRC18	O15417	2968 aa	Predicted RBP	2.87	□□□□□ -1.95
MACF1-231	ENST00000564288	FAM229A	H3BQW9	127 aa		2.87	□□□□□ -1.95
MACF1-231	ENST00000564288	APC	P25054	2843 aa		2.87	□□□□□ -1.95
MACF1-231	ENST00000564288	FRY	Q5TBA9	3013 aa		2.87	□□□□□ -1.95
MACF1-231	ENST00000564288	NF1	P21359	2839 aa		2.86	□□□□□ -1.95
MACF1-231	ENST00000564288	VPS13A	Q96RL7	3174 aa		2.86	□□□□□ -1.95
MACF1-231	ENST00000564288		H3BS24	57 aa		2.86	□□□□□ -1.95
MACF1-231	ENST00000564288	UBE2DNL	Q8IWF7	75 aa		2.86	□□□□□ -1.95
MACF1-231	ENST00000564288	C7orf33	Q8WU49	177 aa		2.86	□□□□□ -1.95
MACF1-231	ENST00000564288	COL27A1	Q8IZC6	1860 aa	Predicted RBP	2.86	□□□□□ -1.95
MACF1-231	ENST00000564288	PLA2G1B	P04054	148 aa	Known RBP	2.86	□□□□□ -1.95
MACF1-231	ENST00000564288	CFAP54	Q96N23	3096 aa		2.86	□□□□□ -1.95
MACF1-231	ENST00000564288		A0A087WSZ3	146 aa		2.86	□□□□□ -1.95
MACF1-231	ENST00000564288	CYSTM1	Q9H1C7	97 aa		2.86	□□□□□ -1.95
MACF1-231	ENST00000564288	FAM104A	Q969W3	186 aa		2.86	□□□□□ -1.95
MACF1-231	ENST00000564288	ZZEF1	O43149	2961 aa		2.86	□□□□□ -1.95
MACF1-231	ENST00000564288	C9orf129	Q5T035	196 aa	Known RBP	2.86	□□□□□ -1.95
MACF1-231	ENST00000564288	ODF3L2	Q3SX64	289 aa		2.86	□□□□□ -1.95
MACF1-231	ENST00000564288	IGLV5-37	A0A075B6J1	123 aa		2.86	□□□□□ -1.95
MACF1-231	ENST00000564288	NUPR2	A6NF83	97 aa		2.85	□□□□□ -1.95
MACF1-231	ENST00000564288		Q5VV11	94 aa		2.85	□□□□□ -1.95
MACF1-231	ENST00000564288	CNBP	P62633	177 aa	Known RBP	2.85	□□□□□ -1.95
MACF1-231	ENST00000564288	MGA	Q8IWI9	3026 aa		2.85	□□□□□ -1.95
MACF1-231	ENST00000564288	C16orf90	A8MZG2	172 aa		2.85	□□□□□ -1.95
MACF1-231	ENST00000564288	C6orf48	Q9UBA6	75 aa		2.85	□□□□□ -1.95
MACF1-231	ENST00000564288	SPRR4	Q96PI1	79 aa		2.84	□□□□□ -1.95
MACF1-231	ENST00000564288	DNAH10OS	P0CZ25	163 aa		2.84	□□□□□ -1.96
MACF1-231	ENST00000564288	C11orf45	Q8TAV5	145 aa		2.84	□□□□□ -1.96
MACF1-231	ENST00000564288	ADGRG4	Q8IZF6	3080 aa		2.84	□□□□□ -1.96
MACF1-231	ENST00000564288	PCOTH	Q58A44	107 aa		2.84	□□□□□ -1.96
MACF1-231	ENST00000564288	PRUNE2	Q8WUY3	3088 aa		2.84	□□□□□ -1.96
MACF1-231	ENST00000564288	TRIO	O75962	3097 aa		2.83	□□□□□ -1.96
MACF1-231	ENST00000564288	FSHB	P01225	129 aa		2.83	□□□□□ -1.96
MACF1-231	ENST00000564288	ZAN	Q9Y493	2812 aa		2.83	□□□□□ -1.96
MACF1-231	ENST00000564288		J3QKU1	62 aa		2.83	□□□□□ -1.96
MACF1-231	ENST00000564288	IGHV6-1	A0A0B4J1U7	121 aa		2.83	□□□□□ -1.96
MACF1-231	ENST00000564288	DEFB136	Q30KP8	78 aa		2.83	□□□□□ -1.96
MACF1-231	ENST00000564288		Q8NAQ8	132 aa		2.82	□□□□□ -1.96
MACF1-231	ENST00000564288	CR1	P17927	2039 aa		2.82	□□□□□ -1.96
MACF1-231	ENST00000564288	HTT	P42858	3142 aa		2.82	□□□□□ -1.96
MACF1-231	ENST00000564288	RANBP2	P49792	3224 aa	Known RBP	2.82	□□□□□ -1.96
MACF1-231	ENST00000564288	LINC00476	Q8WZB0	136 aa		2.82	□□□□□ -1.96
MACF1-231	ENST00000564288	DSCR10	P59022	87 aa		2.82	□□□□□ -1.96
MACF1-231	ENST00000564288	IGLV1-50	A0A075B6I6	118 aa		2.81	□□□□□ -1.96
MACF1-231	ENST00000564288	ZCCHC13	Q8WW36	166 aa	Known RBP	2.81	□□□□□ -1.96
MACF1-231	ENST00000564288	TACC2	O95359	2948 aa		2.81	□□□□□ -1.96
MACF1-231	ENST00000564288		A0A096LNT2	108 aa		2.81	□□□□□ -1.96
MACF1-231	ENST00000564288	IGLV8-61	A0A075B6I0	122 aa		2.81	□□□□□ -1.96
MACF1-231	ENST00000564288	LCE6A	A0A183	80 aa		2.81	□□□□□ -1.96
MACF1-231	ENST00000564288	KRTAP16-1	A8MUX0	517 aa		2.8	□□□□□ -1.96
MACF1-231	ENST00000564288	SPATA8	Q6RVD6	105 aa		2.8	□□□□□ -1.96
MACF1-231	ENST00000564288	COL12A1	Q99715	3063 aa		2.8	□□□□□ -1.96
MACF1-231	ENST00000564288	TNP2	Q05952	138 aa		2.8	□□□□□ -1.96
MACF1-231	ENST00000564288	MRPL34	Q9BQ48	92 aa	Known RBP	2.8	□□□□□ -1.96
MACF1-231	ENST00000564288		A0A096LNI7	61 aa		2.8	□□□□□ -1.96
MACF1-231	ENST00000564288	CRIPT	Q9P021	101 aa		2.8	□□□□□ -1.96
MACF1-231	ENST00000564288	FAM229B	Q4G0N7	80 aa		2.8	□□□□□ -1.96
MACF1-231	ENST00000564288	ST20-AS1	Q8NBB2	130 aa		2.79	□□□□□ -1.96
MACF1-231	ENST00000564288		K7EQZ3	153 aa		2.79	□□□□□ -1.96
MACF1-231	ENST00000564288	LINC00313	P59037	77 aa		2.79	□□□□□ -1.96
MACF1-231	ENST00000564288	CSNK1G2-AS1	Q8NCQ2	148 aa		2.79	□□□□□ -1.96
MACF1-231	ENST00000564288	C1orf134	Q5TEV5	83 aa		2.79	□□□□□ -1.96
MACF1-231	ENST00000564288	MXRA5	Q9NR99	2828 aa		2.79	□□□□□ -1.96
MACF1-231	ENST00000564288		A0A1W2PNM2	257 aa		2.79	□□□□□ -1.96
MACF1-231	ENST00000564288	TENM1	Q9UKZ4	2725 aa		2.79	□□□□□ -1.96
MACF1-231	ENST00000564288	SSBP3-AS1	Q7Z2R9	100 aa		2.79	□□□□□ -1.96
MACF1-231	ENST00000564288		M0R2N4	97 aa		2.79	□□□□□ -1.96
MACF1-231	ENST00000564288	DEFB135	Q30KP9	77 aa		2.79	□□□□□ -1.96
MACF1-231	ENST00000564288	C15orf56	Q8N910	161 aa		2.78	□□□□□ -1.96
MACF1-231	ENST00000564288	DMAC1	Q96GE9	116 aa		2.78	□□□□□ -1.96
MACF1-231	ENST00000564288		A6NN06	94 aa		2.78	□□□□□ -1.96
MACF1-231	ENST00000564288	ASH1L	Q9NR48	2969 aa	Known RBP	2.78	□□□□□ -1.96
MACF1-231	ENST00000564288	COX6B2	Q6YFQ2	88 aa		2.78	□□□□□ -1.97
MACF1-231	ENST00000564288	DEFB4A	O15263	64 aa		2.77	□□□□□ -1.97
MACF1-231	ENST00000564288	C8orf17	Q9NRJ1	99 aa		2.77	□□□□□ -1.97
MACF1-231	ENST00000564288	C9orf163	Q8N9P6	203 aa		2.77	□□□□□ -1.97
MACF1-231	ENST00000564288	IGFL1	Q6UW32	110 aa		2.77	□□□□□ -1.97
MACF1-231	ENST00000564288	PCNT	O95613	3336 aa		2.77	□□□□□ -1.97
MACF1-231	ENST00000564288	SPINT4	Q6UDR6	99 aa		2.76	□□□□□ -1.97
MACF1-231	ENST00000564288	GOLGB1	Q14789	3259 aa	Known RBP	2.76	□□□□□ -1.97

Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms