RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SCXQ7RTU7 201 aa2.69□□□□□ -1.98
LINC00254-201ENST00000563416 C3orf22Q8N5N4 141 aa2.69□□□□□ -1.98
LINC00254-201ENST00000563416 AMELXQ99217 191 aa2.69□□□□□ -1.98
LINC00254-201ENST00000563416 CYSLTR1Q9Y271 337 aa2.69□□□□□ -1.98
LINC00254-201ENST00000563416 LRP1Q07954 4544 aaKnown RBP2.69□□□□□ -1.98
LINC00254-201ENST00000563416 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.68□□□□□ -1.98
LINC00254-201ENST00000563416 TRAV13-1A0A0B4J241 112 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 LINC01549A6NIU2 74 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 IGIPA6NJ69 53 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 COX7A2LO14548 114 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 G0S2P27469 103 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 UBE2D1P51668 147 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 HAMPP81172 84 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 Q5VSD8 79 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 SLC25A34Q6PIV7 304 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 C18orf32Q8TCD1 76 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 TOMM6Q96B49 74 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 TMEM141Q96I45 108 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 FLG2Q5D862 2391 aaPredicted RBP2.67□□□□□ -1.98
LINC00254-201ENST00000563416 IGHV3-64A0A075B6Q5 118 aa2.67□□□□□ -1.98
LINC00254-201ENST00000563416 APOMO95445 188 aa2.67□□□□□ -1.98
LINC00254-201ENST00000563416 KRTAP10-4P60372 401 aaPredicted RBP2.67□□□□□ -1.98
LINC00254-201ENST00000563416 FABP9Q0Z7S8 132 aa2.67□□□□□ -1.98
LINC00254-201ENST00000563416 OR10D4PQ8NGN7 298 aa2.67□□□□□ -1.98
LINC00254-201ENST00000563416 SPACA4Q8TDM5 124 aa2.67□□□□□ -1.98
LINC00254-201ENST00000563416 C2orf88Q9BSF0 95 aa2.67□□□□□ -1.98
LINC00254-201ENST00000563416 A8MWP4 228 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 TMEM238C9JI98 176 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 SMR3BP02814 79 aaPredicted RBP2.66□□□□□ -1.98
LINC00254-201ENST00000563416 COX6A2Q02221 97 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 SPAG11BQ08648 103 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 C5orf38Q86SI9 138 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 LINC00526Q96FQ7 95 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 CARD19Q96LW7 228 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 SIGMAR1Q99720 223 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 SMCO4Q9NRQ5 59 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 PKIGQ9Y2B9 76 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 TNXBP22105 4242 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 HERC1Q15751 4861 aa2.65□□□□□ -1.98
LINC00254-201ENST00000563416 A0A096LNI7 61 aa2.65□□□□□ -1.99
LINC00254-201ENST00000563416 A6NED7 52 aa2.65□□□□□ -1.99
LINC00254-201ENST00000563416 A8MUU9 505 aa2.65□□□□□ -1.99
LINC00254-201ENST00000563416 HBDP02042 147 aa2.65□□□□□ -1.99
LINC00254-201ENST00000563416 SEC11AP67812 179 aa2.65□□□□□ -1.99
LINC00254-201ENST00000563416 SPINT4Q6UDR6 99 aa2.65□□□□□ -1.99
LINC00254-201ENST00000563416 SCGB3A1Q96QR1 104 aa2.65□□□□□ -1.99
LINC00254-201ENST00000563416 MRPL35Q9NZE8 188 aaKnown RBP2.65□□□□□ -1.99
LINC00254-201ENST00000563416 PLAC8Q9NZF1 115 aa2.65□□□□□ -1.99
LINC00254-201ENST00000563416 DMBT1Q9UGM3 2413 aaPredicted RBP2.64□□□□□ -1.99
LINC00254-201ENST00000563416 LOC107984640A0A0U1RRK4 108 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 COLCA2A8K830 154 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 NDUFA1O15239 70 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 IGLC3P0DOY3 106 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 MOBPQ13875 183 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 IGFL1Q6UW32 110 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 Q8IZM0 81 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 CHCHD1Q96BP2 118 aaKnown RBP2.64□□□□□ -1.99
LINC00254-201ENST00000563416 CST9LQ9H4G1 147 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 LINC00474Q9P2X8 69 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 CDKN2A-AS1Q9UH64 79 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 IGKV2-24A0A0C4DH68 120 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 TRBV30A0A0K0K1B3 111 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 A0A1B0GW54 56 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 H3BQ85 93 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 SLC25A20O43772 301 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 TRGC2P03986 189 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 INAFM2P0DMQ5 153 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 UNQ6190/PRO20217Q6UXQ8 127 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 C6orf48Q9UBA6 75 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 ZNF22P17026 224 aaPredicted RBP2.62□□□□□ -1.99
LINC00254-201ENST00000563416 RPL37AP61513 92 aaKnown RBP2.62□□□□□ -1.99
LINC00254-201ENST00000563416 PMCHL1Q16048 86 aa2.62□□□□□ -1.99
LINC00254-201ENST00000563416 C2orf82Q6UX34 121 aa2.62□□□□□ -1.99
LINC00254-201ENST00000563416 ADM2Q7Z4H4 148 aa2.62□□□□□ -1.99
LINC00254-201ENST00000563416 TRAV12-1A0A0B4J245 112 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 A0A0B4J2C4 111 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 A0A1W2PNN7 141 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 C11orf86A6NJI1 115 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 F8VRH5 84 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 H3BRM9 83 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 TSPEAR-AS2P59090 65 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 C9orf116Q5BN46 136 aaPredicted RBP2.61□□□□□ -1.99
LINC00254-201ENST00000563416 IFI27L1Q96BM0 104 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 TOMM7Q9P0U1 55 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 HIST1H2BKO60814 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST1H2BJP06899 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 SPINK8P0C7L1 97 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST1H2BOP23527 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST1H2BBP33778 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST1H2BDP58876 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 CKS1BP61024 79 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST1H2BCP62807 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST2H2BEQ16778 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.6□□□□□ -1.99
LINC00254-201ENST00000563416 BAGE3Q86Y29 109 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 FAM19A2Q8N3H0 131 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 COX7B2Q8TF08 81 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST1H2BHQ93079 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 DPH3Q96FX2 82 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms