RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	SMIM13	P0DJ93	91 aa		4.37	□□□□□ -1.71
CKLF-208	ENST00000563092	TRBV10-2	A0A0K0K1G8	114 aa		4.36	□□□□□ -1.71
CKLF-208	ENST00000563092	SPRR1B	P22528	89 aa		4.36	□□□□□ -1.71
CKLF-208	ENST00000563092	C9orf153	Q5TBE3	101 aa		4.36	□□□□□ -1.71
CKLF-208	ENST00000563092		Q5XG85	94 aa		4.36	□□□□□ -1.71
CKLF-208	ENST00000563092	MIR7-3HG	Q8N6C7	128 aa		4.36	□□□□□ -1.71
CKLF-208	ENST00000563092	URB1-AS1	Q96HZ7	61 aa		4.36	□□□□□ -1.71
CKLF-208	ENST00000563092	TMEM223	A0PJW6	202 aa		4.35	□□□□□ -1.71
CKLF-208	ENST00000563092	TMEM170B	Q5T4T1	132 aa		4.35	□□□□□ -1.71
CKLF-208	ENST00000563092	DDT	P30046	118 aa		4.34	□□□□□ -1.71
CKLF-208	ENST00000563092	NDUFA6	P56556	154 aa		4.34	□□□□□ -1.71
CKLF-208	ENST00000563092	HERV-K104	P63124	156 aa		4.34	□□□□□ -1.71
CKLF-208	ENST00000563092	S100A12	P80511	92 aa		4.34	□□□□□ -1.71
CKLF-208	ENST00000563092	CD164	Q04900	197 aa		4.34	□□□□□ -1.71
CKLF-208	ENST00000563092	BAGE3	Q86Y29	109 aa		4.34	□□□□□ -1.71
CKLF-208	ENST00000563092	ST20-AS1	Q8NBB2	130 aa		4.34	□□□□□ -1.71
CKLF-208	ENST00000563092	LINC00587	B1AMM8	73 aa		4.33	□□□□□ -1.72
CKLF-208	ENST00000563092	JOSD1	Q15040	202 aa	Predicted RBP	4.33	□□□□□ -1.72
CKLF-208	ENST00000563092	SMCO4	Q9NRQ5	59 aa		4.33	□□□□□ -1.72
CKLF-208	ENST00000563092	HBD	P02042	147 aa		4.32	□□□□□ -1.72
CKLF-208	ENST00000563092	C1orf195	Q5TG92	126 aa		4.32	□□□□□ -1.72
CKLF-208	ENST00000563092	MACF1	Q9UPN3	7388 aa	Known RBP	4.32	□□□□□ -1.72
CKLF-208	ENST00000563092	ATP6V1G1	O75348	118 aa		4.31	□□□□□ -1.72
CKLF-208	ENST00000563092	MEIG1	Q5JSS6	88 aa		4.31	□□□□□ -1.72
CKLF-208	ENST00000563092	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.31	□□□□□ -1.72
CKLF-208	ENST00000563092	TRAV23DV6	A0A075B6W5	121 aa		4.3	□□□□□ -1.72
CKLF-208	ENST00000563092	TRAV12-1	A0A0B4J245	112 aa		4.3	□□□□□ -1.72
CKLF-208	ENST00000563092	ZNF73	O43830	326 aa	Predicted RBP	4.3	□□□□□ -1.72
CKLF-208	ENST00000563092	NDUFC2	O95298	119 aa		4.3	□□□□□ -1.72
CKLF-208	ENST00000563092	LINC00614	P0C842	121 aa		4.3	□□□□□ -1.72
CKLF-208	ENST00000563092	HRCT1	Q6UXD1	115 aa		4.3	□□□□□ -1.72
CKLF-208	ENST00000563092	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.3	□□□□□ -1.72
CKLF-208	ENST00000563092	PMCHL1	Q16048	86 aa		4.29	□□□□□ -1.72
CKLF-208	ENST00000563092	COX19	Q49B96	90 aa		4.29	□□□□□ -1.72
CKLF-208	ENST00000563092	SLC25A34	Q6PIV7	304 aa		4.29	□□□□□ -1.72
CKLF-208	ENST00000563092	C18orf32	Q8TCD1	76 aa		4.29	□□□□□ -1.72
CKLF-208	ENST00000563092	MAP1LC3C	Q9BXW4	147 aa		4.29	□□□□□ -1.72
CKLF-208	ENST00000563092	MYMX	A0A1B0GTQ4	84 aa		4.28	□□□□□ -1.72
CKLF-208	ENST00000563092	MT2A	P02795	61 aa		4.28	□□□□□ -1.72
CKLF-208	ENST00000563092	SYNE2	Q8WXH0	6885 aa	Known RBP	4.28	□□□□□ -1.72
CKLF-208	ENST00000563092	TSPEAR-AS2	P59090	65 aa		4.27	□□□□□ -1.73
CKLF-208	ENST00000563092	FABP9	Q0Z7S8	132 aa		4.27	□□□□□ -1.73
CKLF-208	ENST00000563092	SMIM29	Q86T20	159 aa		4.27	□□□□□ -1.73
CKLF-208	ENST00000563092	LAMTOR3	Q9UHA4	124 aa		4.27	□□□□□ -1.73
CKLF-208	ENST00000563092	S100A7L2	Q5SY68	101 aa		4.26	□□□□□ -1.73
CKLF-208	ENST00000563092	SEC11C	Q9BY50	192 aa		4.26	□□□□□ -1.73
CKLF-208	ENST00000563092	PRO1933	Q9H354	126 aa		4.26	□□□□□ -1.73
CKLF-208	ENST00000563092		H7C2G1	150 aa		4.25	□□□□□ -1.73
CKLF-208	ENST00000563092	MT1F	P04733	61 aa		4.25	□□□□□ -1.73
CKLF-208	ENST00000563092	S100P	P25815	95 aa		4.25	□□□□□ -1.73
CKLF-208	ENST00000563092	SOSTDC1	Q6X4U4	206 aa		4.25	□□□□□ -1.73
CKLF-208	ENST00000563092	RPS10P5	Q9NQ39	176 aa		4.25	□□□□□ -1.73
CKLF-208	ENST00000563092	DHRS4-AS1	Q9P1J3	65 aa		4.25	□□□□□ -1.73
CKLF-208	ENST00000563092	IFITM2	Q01629	132 aa		4.24	□□□□□ -1.73
CKLF-208	ENST00000563092		Q6Q795	121 aa		4.24	□□□□□ -1.73
CKLF-208	ENST00000563092		Q75L30	129 aa		4.24	□□□□□ -1.73
CKLF-208	ENST00000563092	IFI27L1	Q96BM0	104 aa		4.24	□□□□□ -1.73
CKLF-208	ENST00000563092	LEPROT	O15243	131 aa		4.23	□□□□□ -1.73
CKLF-208	ENST00000563092	CBY1	Q9Y3M2	126 aa		4.23	□□□□□ -1.73
CKLF-208	ENST00000563092	TMEM218	A2RU14	115 aa		4.22	□□□□□ -1.73
CKLF-208	ENST00000563092	HINT1	P49773	126 aa	Predicted RBP	4.22	□□□□□ -1.73
CKLF-208	ENST00000563092	AKR1D1	P51857	326 aa		4.22	□□□□□ -1.73
CKLF-208	ENST00000563092	ELOF1	P60002	83 aa	Known RBP	4.22	□□□□□ -1.73
CKLF-208	ENST00000563092		Q1RN00	199 aa		4.22	□□□□□ -1.73
CKLF-208	ENST00000563092	KRTAP19-6	Q3LI70	58 aa		4.22	□□□□□ -1.73
CKLF-208	ENST00000563092	COMMD7	Q86VX2	200 aa		4.22	□□□□□ -1.73
CKLF-208	ENST00000563092	MIEN1	Q9BRT3	115 aa		4.22	□□□□□ -1.73
CKLF-208	ENST00000563092	TEX49	A0A1B0GTD5	131 aa		4.21	□□□□□ -1.74
CKLF-208	ENST00000563092	C20orf202	A1L168	122 aa		4.21	□□□□□ -1.74
CKLF-208	ENST00000563092	NMU	P48645	174 aa		4.21	□□□□□ -1.74
CKLF-208	ENST00000563092	KRTAP6-3	Q3LI67	103 aa		4.21	□□□□□ -1.74
CKLF-208	ENST00000563092	C10orf91	Q5T1B1	145 aa		4.21	□□□□□ -1.74
CKLF-208	ENST00000563092	ADAMTSL4-AS1	Q5T5F5	129 aa		4.21	□□□□□ -1.74
CKLF-208	ENST00000563092	IGLV5-48	A0A075B6I7	105 aa		4.2	□□□□□ -1.74
CKLF-208	ENST00000563092		A0A0G2JQZ4	141 aa		4.2	□□□□□ -1.74
CKLF-208	ENST00000563092		J3QQQ9	107 aa		4.2	□□□□□ -1.74
CKLF-208	ENST00000563092	UQCC3	Q6UW78	93 aa		4.2	□□□□□ -1.74
CKLF-208	ENST00000563092	ATP11AUN	Q6ZP68	121 aa		4.2	□□□□□ -1.74
CKLF-208	ENST00000563092	CHCHD1	Q96BP2	118 aa	Known RBP	4.2	□□□□□ -1.74
CKLF-208	ENST00000563092	TRAPPC1	Q9Y5R8	145 aa		4.2	□□□□□ -1.74
CKLF-208	ENST00000563092	RHEB	Q15382	184 aa		4.19	□□□□□ -1.74
CKLF-208	ENST00000563092	CLLU1	Q5K131	121 aa		4.19	□□□□□ -1.74
CKLF-208	ENST00000563092	TCL1B	O95988	128 aa		4.18	□□□□□ -1.74
CKLF-208	ENST00000563092	TAL2	Q16559	108 aa		4.18	□□□□□ -1.74
CKLF-208	ENST00000563092	LITAF	Q99732	161 aa		4.18	□□□□□ -1.74
CKLF-208	ENST00000563092	SPANXC	Q9NY87	97 aa		4.18	□□□□□ -1.74
CKLF-208	ENST00000563092	TRBV7-6	A0A0J9YX20	115 aa		4.17	□□□□□ -1.74
CKLF-208	ENST00000563092		A0A0J9YXY3	114 aa		4.17	□□□□□ -1.74
CKLF-208	ENST00000563092	COX7B	P24311	80 aa		4.17	□□□□□ -1.74
CKLF-208	ENST00000563092	PLN	P26678	52 aa		4.17	□□□□□ -1.74
CKLF-208	ENST00000563092	DEFB105A	Q8NG35	78 aa		4.17	□□□□□ -1.74
CKLF-208	ENST00000563092	SPANXD	Q9BXN6	97 aa		4.17	□□□□□ -1.74
CKLF-208	ENST00000563092	KRTAP10-10	P60014	251 aa		4.16	□□□□□ -1.74
CKLF-208	ENST00000563092	NPC2	P61916	151 aa		4.16	□□□□□ -1.74
CKLF-208	ENST00000563092	C6orf99	Q4VX62	202 aa		4.16	□□□□□ -1.74
CKLF-208	ENST00000563092	LINC00308	Q8TCZ7	52 aa		4.16	□□□□□ -1.74
CKLF-208	ENST00000563092	OBSCN-AS1	Q96MR7	158 aa		4.16	□□□□□ -1.74
CKLF-208	ENST00000563092	LGALS3	P17931	250 aa	Known RBP	4.15	□□□□□ -1.75
CKLF-208	ENST00000563092	C20orf166-AS1	Q96NR2	134 aa		4.15	□□□□□ -1.75
CKLF-208	ENST00000563092	LINC00846	Q9NV44	126 aa		4.15	□□□□□ -1.75

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