RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 Q9Y3F1 56 aa2.59□□□□□ -1.99
CHD9-206ENST00000562791 MINOS1-NBL1R4GNA1 71 aa2.59□□□□□ -1.99
CHD9-206ENST00000562791 CD52P31358 61 aa2.58□□□□□ -2
CHD9-206ENST00000562791 SPINT4Q6UDR6 99 aa2.58□□□□□ -2
CHD9-206ENST00000562791 DEFB132Q7Z7B7 95 aa2.58□□□□□ -2
CHD9-206ENST00000562791 PRO3102Q9H379 93 aa2.58□□□□□ -2
CHD9-206ENST00000562791 KAAG1Q9UBP8 84 aa2.58□□□□□ -2
CHD9-206ENST00000562791 ABCA4P78363 2273 aa2.58□□□□□ -2
CHD9-206ENST00000562791 ANGP03950 147 aaKnown RBP2.57□□□□□ -2
CHD9-206ENST00000562791 IGLV7-43P04211 117 aa2.57□□□□□ -2
CHD9-206ENST00000562791 ACYP2P14621 99 aa2.57□□□□□ -2
CHD9-206ENST00000562791 TOMM7Q9P0U1 55 aa2.57□□□□□ -2
CHD9-206ENST00000562791 ALMS1Q8TCU4 4167 aa2.57□□□□□ -2
CHD9-206ENST00000562791 LYNX1G3V0Z9 82 aa2.56□□□□□ -2
CHD9-206ENST00000562791 INSP01308 110 aa2.56□□□□□ -2
CHD9-206ENST00000562791 APELAP0DMC3 54 aa2.56□□□□□ -2
CHD9-206ENST00000562791 PATE1Q8WXA2 126 aa2.56□□□□□ -2
CHD9-206ENST00000562791 CACNA1GO43497 2377 aa2.56□□□□□ -2
CHD9-206ENST00000562791 LINC00304Q8N9R0 145 aa2.55□□□□□ -2
CHD9-206ENST00000562791 C4orf3Q8WVX3 66 aa2.55□□□□□ -2
CHD9-206ENST00000562791 CCL19Q99731 98 aa2.55□□□□□ -2
CHD9-206ENST00000562791 BRWD1Q9NSI6 2320 aa2.55□□□□□ -2
CHD9-206ENST00000562791 KNL1Q8NG31 2342 aa2.54□□□□□ -2
CHD9-206ENST00000562791 IGKV2-24A0A0C4DH68 120 aa2.54□□□□□ -2
CHD9-206ENST00000562791 NBDYA0A0U1RRE5 68 aa2.54□□□□□ -2
CHD9-206ENST00000562791 A0A1B0GU33 70 aa2.54□□□□□ -2
CHD9-206ENST00000562791 WFDC13Q8IUB5 93 aa2.54□□□□□ -2
CHD9-206ENST00000562791 Q96NJ1 140 aa2.54□□□□□ -2
CHD9-206ENST00000562791 ASCC3Q8N3C0 2202 aaKnown RBP2.54□□□□□ -2
CHD9-206ENST00000562791 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
CHD9-206ENST00000562791 SPRR5A0A1B0GTR4 108 aa2.52□□□□□ -2.01
CHD9-206ENST00000562791 LY6G6CO95867 125 aa2.52□□□□□ -2.01
CHD9-206ENST00000562791 PCOTHQ58A44 107 aa2.52□□□□□ -2.01
CHD9-206ENST00000562791 MINOS1Q5TGZ0 78 aa2.52□□□□□ -2.01
CHD9-206ENST00000562791 WFDC10BQ8IUB3 73 aa2.52□□□□□ -2.01
CHD9-206ENST00000562791 DOPEY2Q9Y3R5 2298 aa2.52□□□□□ -2.01
CHD9-206ENST00000562791 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
CHD9-206ENST00000562791 GVQW2A0A096LPI5 108 aaPredicted RBP2.51□□□□□ -2.01
CHD9-206ENST00000562791 ASXL3Q9C0F0 2248 aa2.5□□□□□ -2.01
CHD9-206ENST00000562791 A8MTW9 85 aa2.5□□□□□ -2.01
CHD9-206ENST00000562791 C6orf48Q9UBA6 75 aa2.5□□□□□ -2.01
CHD9-206ENST00000562791 A0A0G2JQZ4 141 aa2.49□□□□□ -2.01
CHD9-206ENST00000562791 SPTY2D1-AS1A0A0U1RR47 76 aa2.49□□□□□ -2.01
CHD9-206ENST00000562791 A0A1W2PNN7 141 aa2.49□□□□□ -2.01
CHD9-206ENST00000562791 DEFB131AP59861 70 aa2.49□□□□□ -2.01
CHD9-206ENST00000562791 RPL37AP61513 92 aaKnown RBP2.49□□□□□ -2.01
CHD9-206ENST00000562791 C5orf56Q8N8D9 126 aa2.49□□□□□ -2.01
CHD9-206ENST00000562791 BAHCC1Q9P281 2608 aa2.49□□□□□ -2.01
CHD9-206ENST00000562791 CUL9Q8IWT3 2517 aa2.48□□□□□ -2.01
CHD9-206ENST00000562791 ABCA1O95477 2261 aa2.48□□□□□ -2.01
CHD9-206ENST00000562791 MMP24-AS1A0A0U1RRL7 71 aa2.48□□□□□ -2.01
CHD9-206ENST00000562791 ANKRD17O75179 2603 aaKnown RBP2.48□□□□□ -2.01
CHD9-206ENST00000562791 DEFB116Q30KQ4 102 aa2.47□□□□□ -2.01
CHD9-206ENST00000562791 SSBP3-AS1Q7Z2R9 100 aa2.47□□□□□ -2.01
CHD9-206ENST00000562791 H3BUA1 57 aa2.46□□□□□ -2.02
CHD9-206ENST00000562791 DEFB108BQ8NET1 73 aa2.46□□□□□ -2.02
CHD9-206ENST00000562791 PRO2289Q9P1D8 64 aa2.46□□□□□ -2.02
CHD9-206ENST00000562791 RP1L1Q8IWN7 2480 aaPredicted RBP2.46□□□□□ -2.02
CHD9-206ENST00000562791 DEFB1P60022 68 aa2.45□□□□□ -2.02
CHD9-206ENST00000562791 AHCTF1Q8WYP5 2266 aa2.44□□□□□ -2.02
CHD9-206ENST00000562791 ICE1Q9Y2F5 2266 aa2.44□□□□□ -2.02
CHD9-206ENST00000562791 SPINK13Q1W4C9 94 aa2.44□□□□□ -2.02
CHD9-206ENST00000562791 CLPSL2Q6UWE3 100 aa2.44□□□□□ -2.02
CHD9-206ENST00000562791 USMG5Q96IX5 58 aa2.44□□□□□ -2.02
CHD9-206ENST00000562791 RHPN1-AS1Q9BWJ2 59 aa2.44□□□□□ -2.02
CHD9-206ENST00000562791 PSORS1C2Q9UIG4 136 aa2.44□□□□□ -2.02
CHD9-206ENST00000562791 TECTAO75443 2155 aa2.44□□□□□ -2.02
CHD9-206ENST00000562791 TRIOBPQ9H2D6 2365 aa2.42□□□□□ -2.02
CHD9-206ENST00000562791 TRANK1O15050 2925 aa2.42□□□□□ -2.02
CHD9-206ENST00000562791 WNK2Q9Y3S1 2297 aa2.42□□□□□ -2.02
CHD9-206ENST00000562791 H0YAA0 97 aa2.41□□□□□ -2.02
CHD9-206ENST00000562791 IGFL1Q6UW32 110 aa2.41□□□□□ -2.02
CHD9-206ENST00000562791 Q6ZRX8 168 aa2.41□□□□□ -2.02
CHD9-206ENST00000562791 G3V318 75 aa2.4□□□□□ -2.03
CHD9-206ENST00000562791 SPRR1AP35321 89 aa2.4□□□□□ -2.03
CHD9-206ENST00000562791 TPRXLQ17RH7 258 aa2.4□□□□□ -2.03
CHD9-206ENST00000562791 DEFB109BQ30KR1 87 aa2.4□□□□□ -2.03
CHD9-206ENST00000562791 COX6B2Q6YFQ2 88 aa2.4□□□□□ -2.03
CHD9-206ENST00000562791 MRPL34Q9BQ48 92 aaKnown RBP2.4□□□□□ -2.03
CHD9-206ENST00000562791 DEFB105AQ8NG35 78 aa2.39□□□□□ -2.03
CHD9-206ENST00000562791 CNOT1A5YKK6 2376 aaKnown RBP2.39□□□□□ -2.03
CHD9-206ENST00000562791 UNQ6190/PRO20217Q6UXQ8 127 aa2.38□□□□□ -2.03
CHD9-206ENST00000562791 Q6ZSA8 131 aa2.38□□□□□ -2.03
CHD9-206ENST00000562791 SPTBN1Q01082 2364 aaKnown RBP2.38□□□□□ -2.03
CHD9-206ENST00000562791 USP24Q9UPU5 2620 aa2.38□□□□□ -2.03
CHD9-206ENST00000562791 WDR87Q6ZQQ6 2873 aa2.37□□□□□ -2.03
CHD9-206ENST00000562791 COL6A3P12111 3177 aa2.37□□□□□ -2.03
CHD9-206ENST00000562791 WNK1Q9H4A3 2382 aa2.37□□□□□ -2.03
CHD9-206ENST00000562791 MGAQ8IWI9 3026 aa2.36□□□□□ -2.03
CHD9-206ENST00000562791 CHD8Q9HCK8 2581 aa2.36□□□□□ -2.03
CHD9-206ENST00000562791 CRIPTQ9P021 101 aa2.36□□□□□ -2.03
CHD9-206ENST00000562791 PCNTO95613 3336 aa2.36□□□□□ -2.03
CHD9-206ENST00000562791 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.35□□□□□ -2.03
CHD9-206ENST00000562791 PLAC4Q8WY50 150 aa2.35□□□□□ -2.03
CHD9-206ENST00000562791 SPRR1BP22528 89 aa2.34□□□□□ -2.03
CHD9-206ENST00000562791 H1FX-AS1Q4G0G2 97 aa2.34□□□□□ -2.03
CHD9-206ENST00000562791 CACNA1BQ00975 2339 aa2.34□□□□□ -2.04
CHD9-206ENST00000562791 ZNF462Q96JM2 2506 aa2.33□□□□□ -2.04
CHD9-206ENST00000562791 H3BUX3 64 aa2.33□□□□□ -2.04
CHD9-206ENST00000562791 HTN1P15515 57 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 2098.9 ms