RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 ABCC5O15440 1437 aa-1.24□□□□□ -2.61
DENND4A-205ENST00000562540 NCOA3Q9Y6Q9 1424 aa-1.24□□□□□ -2.61
DENND4A-205ENST00000562540 EIF4G3O43432 1585 aaKnown RBP-1.25□□□□□ -2.61
DENND4A-205ENST00000562540 PTPN23Q9H3S7 1636 aa-1.25□□□□□ -2.61
DENND4A-205ENST00000562540 SHPRHQ149N8 1683 aa-1.25□□□□□ -2.61
DENND4A-205ENST00000562540 ABCA3Q99758 1704 aa-1.25□□□□□ -2.61
DENND4A-205ENST00000562540 UQCRHP07919 91 aa-1.25□□□□□ -2.61
DENND4A-205ENST00000562540 PSENENQ9NZ42 101 aa-1.25□□□□□ -2.61
DENND4A-205ENST00000562540 AP4S1Q9Y587 144 aa-1.25□□□□□ -2.61
DENND4A-205ENST00000562540 MPC2O95563 127 aa-1.26□□□□□ -2.61
DENND4A-205ENST00000562540 DMXL1Q9Y485 3027 aa-1.26□□□□□ -2.61
DENND4A-205ENST00000562540 FAM186AA6NE01 2351 aa-1.26□□□□□ -2.61
DENND4A-205ENST00000562540 MLH3Q9UHC1 1453 aa-1.26□□□□□ -2.61
DENND4A-205ENST00000562540 ADAMTS12P58397 1594 aa-1.26□□□□□ -2.61
DENND4A-205ENST00000562540 MON2Q7Z3U7 1717 aa-1.26□□□□□ -2.61
DENND4A-205ENST00000562540 BCORQ6W2J9 1755 aa-1.26□□□□□ -2.61
DENND4A-205ENST00000562540 KALRNO60229 2985 aa-1.26□□□□□ -2.61
DENND4A-205ENST00000562540 VPS13BQ7Z7G8 4022 aa-1.27□□□□□ -2.61
DENND4A-205ENST00000562540 TOPAZ1Q8N9V7 1692 aa-1.27□□□□□ -2.61
DENND4A-205ENST00000562540 UBR3Q6ZT12 1888 aa-1.27□□□□□ -2.61
DENND4A-205ENST00000562540 A0A0C4DFX4 3053 aa-1.27□□□□□ -2.61
DENND4A-205ENST00000562540 CEP290O15078 2479 aa-1.28□□□□□ -2.61
DENND4A-205ENST00000562540 C20orf202A1L168 122 aa-1.28□□□□□ -2.61
DENND4A-205ENST00000562540 TMEM218A2RU14 115 aa-1.28□□□□□ -2.61
DENND4A-205ENST00000562540 H7BZZ5 65 aa-1.28□□□□□ -2.61
DENND4A-205ENST00000562540 NMSQ5H8A3 153 aa-1.28□□□□□ -2.61
DENND4A-205ENST00000562540 CFAP46Q8IYW2 2715 aa-1.28□□□□□ -2.61
DENND4A-205ENST00000562540 DNAH1Q9P2D7 4330 aa-1.29□□□□□ -2.62
DENND4A-205ENST00000562540 RGPD2P0DJD1 1756 aa-1.29□□□□□ -2.62
DENND4A-205ENST00000562540 DNAH11Q96DT5 4516 aa-1.29□□□□□ -2.62
DENND4A-205ENST00000562540 LINC00587B1AMM8 73 aa-1.29□□□□□ -2.62
DENND4A-205ENST00000562540 ALKAL2Q6UX46 152 aa-1.29□□□□□ -2.62
DENND4A-205ENST00000562540 TROQ12816 1431 aaPredicted RBP-1.3□□□□□ -2.62
DENND4A-205ENST00000562540 FRYQ5TBA9 3013 aa-1.3□□□□□ -2.62
DENND4A-205ENST00000562540 CICQ96RK0 1608 aaPredicted RBP-1.3□□□□□ -2.62
DENND4A-205ENST00000562540 SRCAPQ6ZRS2 3230 aa-1.31□□□□□ -2.62
DENND4A-205ENST00000562540 C5P01031 1676 aa-1.31□□□□□ -2.62
DENND4A-205ENST00000562540 D6R8Y8 96 aa-1.31□□□□□ -2.62
DENND4A-205ENST00000562540 IGLC2P0DOY2 106 aa-1.31□□□□□ -2.62
DENND4A-205ENST00000562540 IGLC3P0DOY3 106 aa-1.31□□□□□ -2.62
DENND4A-205ENST00000562540 HMGN3Q15651 99 aa-1.31□□□□□ -2.62
DENND4A-205ENST00000562540 MUSTN1Q8IVN3 82 aa-1.31□□□□□ -2.62
DENND4A-205ENST00000562540 PMCHL2Q9BQD1 86 aa-1.31□□□□□ -2.62
DENND4A-205ENST00000562540 SAMD9Q5K651 1589 aa-1.31□□□□□ -2.62
DENND4A-205ENST00000562540 CHD7Q9P2D1 2997 aa-1.31□□□□□ -2.62
DENND4A-205ENST00000562540 CUX1P39880 1505 aa-1.31□□□□□ -2.62
DENND4A-205ENST00000562540 CMYA5Q8N3K9 4069 aa-1.31□□□□□ -2.62
DENND4A-205ENST00000562540 MT1HL1P0DM35 61 aa-1.32□□□□□ -2.62
DENND4A-205ENST00000562540 SERP2Q8N6R1 65 aa-1.32□□□□□ -2.62
DENND4A-205ENST00000562540 ABCC2Q92887 1545 aa-1.32□□□□□ -2.62
DENND4A-205ENST00000562540 RAPGEF2Q9Y4G8 1499 aa-1.32□□□□□ -2.62
DENND4A-205ENST00000562540 DNAH7Q8WXX0 4024 aa-1.32□□□□□ -2.62
DENND4A-205ENST00000562540 DYNC1H1Q14204 4646 aaKnown RBP-1.33□□□□□ -2.62
DENND4A-205ENST00000562540 H3BNG1 76 aa-1.33□□□□□ -2.62
DENND4A-205ENST00000562540 ATOX1O00244 68 aa-1.33□□□□□ -2.62
DENND4A-205ENST00000562540 LEPROTL1O95214 131 aa-1.33□□□□□ -2.62
DENND4A-205ENST00000562540 MYH4Q9Y623 1939 aa-1.33□□□□□ -2.62
DENND4A-205ENST00000562540 PRDM15P57071 1507 aaPredicted RBP-1.34□□□□□ -2.62
DENND4A-205ENST00000562540 ETDBQ3ZM63 59 aa-1.34□□□□□ -2.62
DENND4A-205ENST00000562540 MYO9AB2RTY4 2548 aa-1.34□□□□□ -2.62
DENND4A-205ENST00000562540 SACSQ9NZJ4 4579 aa-1.34□□□□□ -2.62
DENND4A-205ENST00000562540 K7EP34 96 aa-1.35□□□□□ -2.63
DENND4A-205ENST00000562540 ZNF720Q7Z2F6 126 aa-1.35□□□□□ -2.63
DENND4A-205ENST00000562540 DMXL2Q8TDJ6 3036 aa-1.35□□□□□ -2.63
DENND4A-205ENST00000562540 MT-ATP8P03928 68 aa-1.36□□□□□ -2.63
DENND4A-205ENST00000562540 LRBAP50851 2863 aa-1.36□□□□□ -2.63
DENND4A-205ENST00000562540 C5orf42Q9H799 3197 aa-1.37□□□□□ -2.63
DENND4A-205ENST00000562540 NRXN1Q9ULB1 1477 aa-1.37□□□□□ -2.63
DENND4A-205ENST00000562540 APOBP04114 4563 aaKnown RBP-1.37□□□□□ -2.63
DENND4A-205ENST00000562540 C9orf92A6NGG3 77 aa-1.37□□□□□ -2.63
DENND4A-205ENST00000562540 F8WEM9 126 aa-1.37□□□□□ -2.63
DENND4A-205ENST00000562540 MT1XP80297 61 aa-1.37□□□□□ -2.63
DENND4A-205ENST00000562540 SARNPP82979 210 aaKnown RBP-1.37□□□□□ -2.63
DENND4A-205ENST00000562540 COL5A1-AS1Q5SY13 56 aa-1.37□□□□□ -2.63
DENND4A-205ENST00000562540 COX6B2Q6YFQ2 88 aa-1.37□□□□□ -2.63
DENND4A-205ENST00000562540 ACACBO00763 2458 aa-1.37□□□□□ -2.63
DENND4A-205ENST00000562540 FAM135AQ9P2D6 1515 aa-1.37□□□□□ -2.63
DENND4A-205ENST00000562540 ANKRD36BQ8N2N9 1353 aa-1.37□□□□□ -2.63
DENND4A-205ENST00000562540 CRYBG1Q9Y4K1 1723 aa-1.37□□□□□ -2.63
DENND4A-205ENST00000562540 COX7BP24311 80 aa-1.38□□□□□ -2.63
DENND4A-205ENST00000562540 RELNP78509 3460 aa-1.39□□□□□ -2.63
DENND4A-205ENST00000562540 ZFYVE16Q7Z3T8 1539 aa-1.39□□□□□ -2.63
DENND4A-205ENST00000562540 UQCRHLA0A096LP55 91 aa-1.39□□□□□ -2.63
DENND4A-205ENST00000562540 H0YAA0 97 aa-1.39□□□□□ -2.63
DENND4A-205ENST00000562540 NDUFA3O95167 84 aa-1.39□□□□□ -2.63
DENND4A-205ENST00000562540 FAUP35544 74 aaKnown RBP-1.39□□□□□ -2.63
DENND4A-205ENST00000562540 S100A10P60903 97 aa-1.39□□□□□ -2.63
DENND4A-205ENST00000562540 DNAH8Q96JB1 4490 aa-1.39□□□□□ -2.63
DENND4A-205ENST00000562540 LINC00032P0C843 101 aa-1.4□□□□□ -2.63
DENND4A-205ENST00000562540 DEFB1P60022 68 aa-1.4□□□□□ -2.63
DENND4A-205ENST00000562540 RPL38P63173 70 aaKnown RBP-1.4□□□□□ -2.63
DENND4A-205ENST00000562540 MAGI2Q86UL8 1455 aa-1.4□□□□□ -2.63
DENND4A-205ENST00000562540 PKD1L3Q7Z443 1732 aa-1.4□□□□□ -2.63
DENND4A-205ENST00000562540 QSER1Q2KHR3 1735 aa-1.41□□□□□ -2.64
DENND4A-205ENST00000562540 RGPD8O14715 1765 aaPredicted RBP-1.42□□□□□ -2.64
DENND4A-205ENST00000562540 RGPD5Q99666 1765 aa-1.42□□□□□ -2.64
DENND4A-205ENST00000562540 ANKRD50Q9ULJ7 1429 aa-1.42□□□□□ -2.64
DENND4A-205ENST00000562540 TLN1Q9Y490 2541 aaKnown RBP-1.42□□□□□ -2.64
DENND4A-205ENST00000562540 TLN2Q9Y4G6 2542 aa-1.43□□□□□ -2.64
DENND4A-205ENST00000562540 EYSQ5T1H1 3165 aa-1.43□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms