RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 Q6ZRX8 168 aa10.34□□□□□ -0.75
CMTM3-204ENST00000562357 KRTAP9-2Q9BYQ4 174 aa10.34□□□□□ -0.75
CMTM3-204ENST00000562357 PPDPFQ9H3Y8 114 aa10.34□□□□□ -0.75
CMTM3-204ENST00000562357 HINT1P49773 126 aaPredicted RBP10.33□□□□□ -0.76
CMTM3-204ENST00000562357 GAGE2AQ6NT46 116 aa10.33□□□□□ -0.76
CMTM3-204ENST00000562357 SOSTDC1Q6X4U4 206 aa10.33□□□□□ -0.76
CMTM3-204ENST00000562357 RETNLBQ9BQ08 111 aa10.32□□□□□ -0.76
CMTM3-204ENST00000562357 SPANXCQ9NY87 97 aa10.32□□□□□ -0.76
CMTM3-204ENST00000562357 RNF213Q63HN8 5207 aa10.32□□□□□ -0.76
CMTM3-204ENST00000562357 LINC00308Q8TCZ7 52 aa10.31□□□□□ -0.76
CMTM3-204ENST00000562357 ZNF73O43830 326 aaPredicted RBP10.3□□□□□ -0.76
CMTM3-204ENST00000562357 AKR1D1P51857 326 aa10.3□□□□□ -0.76
CMTM3-204ENST00000562357 LINC00483Q53H64 154 aa10.3□□□□□ -0.76
CMTM3-204ENST00000562357 OR13C6PQ8NH95 151 aa10.3□□□□□ -0.76
CMTM3-204ENST00000562357 EIF4EBP3O60516 100 aaPredicted RBP10.29□□□□□ -0.76
CMTM3-204ENST00000562357 SCGB1D4Q6XE38 83 aa10.29□□□□□ -0.76
CMTM3-204ENST00000562357 Q8NBF4 154 aa10.29□□□□□ -0.76
CMTM3-204ENST00000562357 LITAFQ99732 161 aa10.29□□□□□ -0.76
CMTM3-204ENST00000562357 Q9BRP9 147 aa10.28□□□□□ -0.76
CMTM3-204ENST00000562357 ERC2-IT1O76042 136 aa10.27□□□□□ -0.77
CMTM3-204ENST00000562357 COPS9Q8WXC6 57 aa10.27□□□□□ -0.77
CMTM3-204ENST00000562357 IGLV7-46A0A075B6I9 117 aa10.26□□□□□ -0.77
CMTM3-204ENST00000562357 IGLV9-49A0A0B4J1Y8 123 aa10.26□□□□□ -0.77
CMTM3-204ENST00000562357 LINC00518Q8N0U6 118 aa10.26□□□□□ -0.77
CMTM3-204ENST00000562357 SPANXDQ9BXN6 97 aa10.26□□□□□ -0.77
CMTM3-204ENST00000562357 MOBPQ13875 183 aa10.25□□□□□ -0.77
CMTM3-204ENST00000562357 TTTY13Q9BZ97 58 aa10.25□□□□□ -0.77
CMTM3-204ENST00000562357 SPINK1P00995 79 aa10.24□□□□□ -0.77
CMTM3-204ENST00000562357 CDIP1Q9H305 208 aa10.24□□□□□ -0.77
CMTM3-204ENST00000562357 SSBP3-AS1Q7Z2R9 100 aa10.23□□□□□ -0.77
CMTM3-204ENST00000562357 TPRXLQ17RH7 258 aa10.22□□□□□ -0.77
CMTM3-204ENST00000562357 ATOH7Q8N100 152 aa10.22□□□□□ -0.77
CMTM3-204ENST00000562357 C5orf52A6NGY3 159 aa10.21□□□□□ -0.77
CMTM3-204ENST00000562357 S100A2P29034 98 aa10.21□□□□□ -0.77
CMTM3-204ENST00000562357 ANKRD39Q53RE8 183 aa10.21□□□□□ -0.77
CMTM3-204ENST00000562357 C9orf153Q5TBE3 101 aa10.21□□□□□ -0.77
CMTM3-204ENST00000562357 FP248Q71RG6 208 aaPredicted RBP10.21□□□□□ -0.77
CMTM3-204ENST00000562357 DHRS4-AS1Q9P1J3 65 aa10.2□□□□□ -0.78
CMTM3-204ENST00000562357 IFITM1P13164 125 aa10.19□□□□□ -0.78
CMTM3-204ENST00000562357 S100A1P23297 94 aa10.19□□□□□ -0.78
CMTM3-204ENST00000562357 SNRPEP62304 92 aaKnown RBP10.19□□□□□ -0.78
CMTM3-204ENST00000562357 Q6ZVH6 145 aa10.19□□□□□ -0.78
CMTM3-204ENST00000562357 SLC25A34Q6PIV7 304 aa10.18□□□□□ -0.78
CMTM3-204ENST00000562357 A0A0U1RQV1 116 aa10.16□□□□□ -0.78
CMTM3-204ENST00000562357 COX7BP24311 80 aa10.16□□□□□ -0.78
CMTM3-204ENST00000562357 C6orf99Q4VX62 202 aa10.16□□□□□ -0.78
CMTM3-204ENST00000562357 ST20-AS1Q8NBB2 130 aa10.16□□□□□ -0.78
CMTM3-204ENST00000562357 HSBP1L1C9JCN9 74 aa10.15□□□□□ -0.78
CMTM3-204ENST00000562357 RPS29P62273 56 aaKnown RBP10.15□□□□□ -0.78
CMTM3-204ENST00000562357 A6NDN8 102 aa10.14□□□□□ -0.79
CMTM3-204ENST00000562357 S100A6P06703 90 aa10.14□□□□□ -0.79
CMTM3-204ENST00000562357 ELOF1P60002 83 aaKnown RBP10.14□□□□□ -0.79
CMTM3-204ENST00000562357 PCP2Q8IVA1 136 aa10.14□□□□□ -0.79
CMTM3-204ENST00000562357 HIST3H2BBQ8N257 126 aa10.13□□□□□ -0.79
CMTM3-204ENST00000562357 HIST1H2BLQ99880 126 aa10.13□□□□□ -0.79
CMTM3-204ENST00000562357 SLC25A20O43772 301 aa10.11□□□□□ -0.79
CMTM3-204ENST00000562357 MUSTN1Q8IVN3 82 aa10.11□□□□□ -0.79
CMTM3-204ENST00000562357 LAMTOR3Q9UHA4 124 aa10.11□□□□□ -0.79
CMTM3-204ENST00000562357 TRBV7-6A0A0J9YX20 115 aa10.1□□□□□ -0.79
CMTM3-204ENST00000562357 SPRR1BP22528 89 aa10.1□□□□□ -0.79
CMTM3-204ENST00000562357 TRAV13-2A0A0B4J235 113 aa10.09□□□□□ -0.79
CMTM3-204ENST00000562357 A0A1B0GWB2 263 aa10.09□□□□□ -0.79
CMTM3-204ENST00000562357 TAL2Q16559 108 aa10.09□□□□□ -0.79
CMTM3-204ENST00000562357 Q8N377 158 aa10.08□□□□□ -0.8
CMTM3-204ENST00000562357 A4D1N5 150 aa10.06□□□□□ -0.8
CMTM3-204ENST00000562357 DEFB105AQ8NG35 78 aa10.06□□□□□ -0.8
CMTM3-204ENST00000562357 TEX49A0A1B0GTD5 131 aa10.05□□□□□ -0.8
CMTM3-204ENST00000562357 LIMD2Q9BT23 127 aa10.05□□□□□ -0.8
CMTM3-204ENST00000562357 NHP2Q9NX24 153 aaKnown RBP10.05□□□□□ -0.8
CMTM3-204ENST00000562357 KRTAP13-3Q3SY46 172 aa10.04□□□□□ -0.8
CMTM3-204ENST00000562357 Q1RN00 199 aa10.02□□□□□ -0.81
CMTM3-204ENST00000562357 MUC2Q02817 5179 aa10.01□□□□□ -0.81
CMTM3-204ENST00000562357 SCGB1D1O95968 90 aa10.01□□□□□ -0.81
CMTM3-204ENST00000562357 VAMP3Q15836 100 aa10.01□□□□□ -0.81
CMTM3-204ENST00000562357 SMIM11BQ8TCY0 68 aa10.01□□□□□ -0.81
CMTM3-204ENST00000562357 HRCT1Q6UXD1 115 aa10□□□□□ -0.81
CMTM3-204ENST00000562357 PRO1933Q9H354 126 aa10□□□□□ -0.81
CMTM3-204ENST00000562357 IGLV5-48A0A075B6I7 105 aa9.96□□□□□ -0.82
CMTM3-204ENST00000562357 CD164Q04900 197 aa9.96□□□□□ -0.82
CMTM3-204ENST00000562357 H7C2G1 150 aa9.95□□□□□ -0.82
CMTM3-204ENST00000562357 SEC61BP60468 96 aaKnown RBP9.95□□□□□ -0.82
CMTM3-204ENST00000562357 HIST1H4GQ99525 98 aa9.94□□□□□ -0.82
CMTM3-204ENST00000562357 MUC17Q685J3 4493 aa9.92□□□□□ -0.82
CMTM3-204ENST00000562357 F8WEM9 126 aa9.92□□□□□ -0.82
CMTM3-204ENST00000562357 COX8AP10176 69 aa9.92□□□□□ -0.82
CMTM3-204ENST00000562357 ASB16-AS1Q495Z4 193 aa9.92□□□□□ -0.82
CMTM3-204ENST00000562357 LINC01547P58512 204 aaPredicted RBP9.91□□□□□ -0.82
CMTM3-204ENST00000562357 SMIM29Q86T20 159 aa9.91□□□□□ -0.82
CMTM3-204ENST00000562357 LINC00575Q6W349 94 aa9.89□□□□□ -0.83
CMTM3-204ENST00000562357 C12orf57Q99622 126 aa9.89□□□□□ -0.83
CMTM3-204ENST00000562357 hADV29S1A0JD25 119 aa9.88□□□□□ -0.83
CMTM3-204ENST00000562357 DLEU1O43261 78 aa9.88□□□□□ -0.83
CMTM3-204ENST00000562357 BVES-AS1Q5T3Y7 98 aa9.87□□□□□ -0.83
CMTM3-204ENST00000562357 Q6ZQY7 126 aa9.86□□□□□ -0.83
CMTM3-204ENST00000562357 XP32Q5T750 250 aa9.85□□□□□ -0.83
CMTM3-204ENST00000562357 Q5XG85 94 aa9.85□□□□□ -0.83
CMTM3-204ENST00000562357 VAMP8Q9BV40 100 aa9.84□□□□□ -0.83
CMTM3-204ENST00000562357 PAM16Q9Y3D7 125 aa9.84□□□□□ -0.83
CMTM3-204ENST00000562357 SPATA45Q537H7 98 aa9.83□□□□□ -0.84
CMTM3-204ENST00000562357 RAB37Q96AX2 223 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 710.5 ms